GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:22:56

Sequence gi568815588f:58285548_58495071 : 209524 bp : 38.04% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2729   2856  128  1  2   82  103    99 0.505   9.36
 1.02 Term +   7113   7179   67  0  1   61   50    39 0.063  -6.17
 1.03 PlyA +   7264   7269    6                               1.05

 2.03 PlyA -   8141   8136    6                               1.05
 2.02 Term -  10918  10885   34  0  1  105   42    28 0.528  -4.02
 2.01 Init -  12252  11372  881  0  2   42   39   423 0.420  26.79
 2.00 Prom -  15633  15594   40                              -5.35

 3.04 PlyA -  15888  15883    6                               1.05
 3.03 Term -  20859  20709  151  2  1   93   42    51 0.323  -2.60
 3.02 Intr -  21733  21639   95  1  2   78   89    54 0.424   2.34
 3.01 Init -  24162  24115   48  0  0   98   46    77 0.638   5.50
 3.00 Prom -  35688  35649   40                              -3.15

 4.04 PlyA -  35882  35877    6                               1.05
 4.03 Term -  41662  41154  509  2  2   59   47   258 0.454  12.38
 4.02 Intr -  41922  41805  118  0  1   58   75    49 0.439  -0.28
 4.01 Init -  42601  42518   84  1  0   31   53   112 0.548   2.87
 4.00 Prom -  44713  44674   40                              -4.85

 5.00 Prom +  45504  45543   40                              -9.85
 5.01 Init +  49655  50293  639  1  0   71   42   275 0.016  14.73
 5.02 Intr +  75791  75854   64  1  1   81   67    75 0.083   2.07
 5.03 Intr +  82376  82469   94  0  1   54  106    47 0.080   1.20
 5.04 Intr +  88056  88137   82  0  1   68   67    79 0.033   2.52
 5.05 Intr +  99412  99598  187  0  1   54   60   154 0.009   7.54
 5.06 Intr +  99924 100101  178  1  1  -22   96   194 0.013   7.26
 5.07 Intr + 100673 100791  119  2  2   58  110    11 0.008  -0.51
 5.08 Intr + 102643 102713   71  2  2   78   80    54 0.170   1.58
 5.09 Intr + 103123 103272  150  0  0   82   87    54 0.215   4.14
 5.10 Intr + 105218 105313   96  1  0   77  103    62 0.954   5.89
 5.11 Intr + 108811 108867   57  0  0   89   81    49 0.836   2.46
 5.12 Term + 109381 109527  147  0  0   54   42   187 0.924   7.62
 5.13 PlyA + 110170 110175    6                               1.05

 6.03 PlyA - 110269 110264    6                               1.05
 6.02 Term - 126713 126484  230  0  2   47   49   182 0.698   6.01
 6.01 Init - 128294 128240   55  2  1   68   98    20 0.420   2.51
 6.00 Prom - 131966 131927   40                              -5.35

 7.03 PlyA - 132090 132085    6                               1.05
 7.02 Term - 133762 132923  840  1  0   75   39   200 0.858   5.74
 7.01 Init - 135473 134982  492  2  0   66   54   256 0.635  15.20
 7.00 Prom - 135897 135858   40                              -6.15

 8.04 PlyA - 136067 136062    6                               1.05
 8.03 Term - 137139 136846  294  0  0  -19   48   327 0.461  12.32
 8.02 Intr - 140175 140141   35  1  2   77   76    22 0.383  -3.08
 8.01 Init - 141217 140881  337  1  1   87   98    96 0.198   7.99
 8.00 Prom - 143227 143188   40                              -3.45

 9.00 Prom + 151819 151858   40                              -5.25
 9.01 Init + 152728 152854  127  0  1   57   50   128 0.340   6.27
 9.02 Intr + 162017 162253  237  0  0   46   62   170 0.003   6.86
 9.03 Intr + 162666 162818  153  1  0   27   23   176 0.003   4.12
 9.04 Term + 194717 194868  152  0  2   -2   42   249 0.339   8.39
 9.05 PlyA + 195008 195013    6                               1.05

10.00 Prom + 200817 200856   40                              -5.65
10.01 Init + 208407 208580  174  2  0   48   70   179 0.572  11.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  49655  50302  648  1  0   71   37   294 0.962  16.67
S.002 Init -  65597  65516   82  2  1   64  115    20 0.938   3.48


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:58285548_58495071|GENSCAN_predicted_peptide_1|64_aa
IFNEDGSIKGANSENLVKGDIRFKLVMKNVLKSNVPEFWPKEWATRCPDICSDILLGVSV
SGFG

>gi568815588f:58285548_58495071|GENSCAN_predicted_CDS_1|195_bp
atatttaatgaagatggatccattaaaggagccaatagtgaaaatttagttaaaggtgat
attagatttaaattagtcatgaagaatgtcttaaaatctaatgttccagaattctggccc
aaggaatgggctacaaggtgcccagatatttgttcagacattcttctgggtgtttctgtg
agtggttttggatga

>gi568815588f:58285548_58495071|GENSCAN_predicted_peptide_2|304_aa
MIISIDAEKAFDKIQQPFMLKTLNKLGINGKYLKILRAIYEKPTANSILNGQKLEAFPLK
TGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLLADDMIVYLENPIVF
AQNLLKLISNFSKVSGYKINVEKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLT
RDVKDLFKENYEALLNEIKEDTNKWKNIPSSWVGRINIVKMAILPKLIYRFNAILIKLPM
TFFTELEKTTLKFIWNQKRAHIAKSILNQKNKAAGIMLPDFKLYYKATVTKTAWDSPNVL
NNEQ

>gi568815588f:58285548_58495071|GENSCAN_predicted_CDS_2|915_bp
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaacccttcatgcta
aaaactctcaataaattaggtattaatgggaagtatctcaaaatactaagagctatctat
gagaagcccacagccaatagcatactgaatgggcaaaaactggaggcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaattaggcaggagaaagaaataaagggtattcaattaggaaaagaggaa
gtcaaattgtccctgcttgcagatgacatgatagtatatctagaaaaccccattgtcttt
gcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtagaaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaca
agggatgtgaaggacctgttcaaggagaactacgaagcactgctcaatgaaataaaagag
gatacaaacaaatggaagaacattccaagctcatgggtaggaagaatcaatatcgtgaaa
atggccatactgcccaagttaatttatagattcaatgccatcctcatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cacatcgccaagtcaatcctaaaccaaaagaacaaagctgcaggcatcatgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatgggattcccccaatgtgctc
aataatgagcagtga

>gi568815588f:58285548_58495071|GENSCAN_predicted_peptide_3|97_aa
MAEGKEGADISHDTAGGAGVQCPSMTTSPQGKPQIVFQKMCRGTAMPKNLENIPVNAQVK
SLAVILFSHTTFNPSANLAHSTFKIYPESDQLSSTPS

>gi568815588f:58285548_58495071|GENSCAN_predicted_CDS_3|294_bp
atggcggaaggcaaagagggagcagacatctcacacgacacagcgggaggtgctggagtc
cagtgtccctccatgacaacttctccccagggtaaacctcaaatcgtctttcagaaaatg
tgcagagggacagccatgcccaaaaatctggagaacatcccagtaaatgctcaggtcaaa
agccttgcagtaatccttttctcacacactacatttaatccatcagcaaatctggcccat
tctaccttcaaaatatatcctgaatctgaccaactttctagcactccatcctag

>gi568815588f:58285548_58495071|GENSCAN_predicted_peptide_4|236_aa
MHLNHPETTTPSSVENLSSMKLVPGAEKGCCFRHSIRPNKKGKKISKSPSPSICKVEILH
PGCASGQRLTRHLPRSGRPGKERGRRRSRDPYDRHPQQCEAWASCHPAAGLQQPSSPTPG
PAYGRGHRDLAAVRSSDLRSLCRIRSRQQELSAHGIQSGSRVTMGCGGGGGGRWSRERWS
RERGADLEKSLERITGQVEEADEELPGCAADQGRSGGRVKATVGNRAIYEDVEGRS

>gi568815588f:58285548_58495071|GENSCAN_predicted_CDS_4|711_bp
atgcacttgaatcatcccgaaaccaccaccccatcatccgtggaaaatttgtcttccatg
aaactggtccctggtgccgaaaagggatgctgtttccgtcattccatccgaccaaataag
aaaggaaagaagatctcaaaatctcccagccccagcatctgtaaagtagaaattctccac
cctggctgtgcctcaggacagcggctgactcgtcacctgccccgctccgggaggccaggg
aaggagcgaggacgccgcaggagccgggatccatatgaccgtcacccacagcaatgcgaa
gcctgggcctcctgtcaccccgcagcagggctgcagcaacccagttctcccacacccggc
ccagcttacggaagaggccacagggatcttgcagccgtcagaagctcagatttaagaagt
ctctgcaggatacggagcaggcagcaggagttgtcagcgcacggaatacagagtggttcc
cgggtcacgatggggtgtggaggcgggggtggggggagatggtccagagaaagatggtcc
agagaaagaggggcagatttggagaagtctttggagaggatcactggccaagtggaagag
gcggatgaagagctccctgggtgtgctgctgaccaaggcagatctggaggcagagtcaaa
gcaacagtcggcaatcgggcaatttatgaagacgttgaaggaaggagttga

>gi568815588f:58285548_58495071|GENSCAN_predicted_peptide_5|627_aa
MALKRIQKVSAGAGPGAAGQRPPAHADSASGPERHAGRARDGRVGRGAGRELKARAGPAG
IGQVRWEQGQVPGGRRSLKAGGPRAFAPEPLPEPQGREPLARPDRPEICASRSRPGFALH
GASFDPCHAVFSPGCFLSLSSFMFLLTRPPREGKEGGVGLQPFSAELSGWFFLSSAVGSC
SVARMGWKAHLRPRSQEKAPAPSILVPLLLPLQELSDLQRDPPAHCSAGPVGDDFLLSIC
SLLCDPNPDDPLVPDIAQIYKSDKEKFLAQDDSDGLRLEAFGGFSTHTLAPGQVCESPPL
PLLFLNSELQPWLELRRSAGRAAAADRTSGSWMQDCLLRTALVTVTGGHRPTPGWVVIAG
VVYCQEALRDWGRVTASSTGAMAFLRSMWGVLSALGRSGAELCTGCGSRLRSPFSFVYLP
RWFSSVLASCPKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIY
QDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPR
SAYNVYVAERFQEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWE
EQMIEVGRKDLLRRTIKKQRKYGAEEC

>gi568815588f:58285548_58495071|GENSCAN_predicted_CDS_5|1884_bp
atggcgctgaagaggattcagaaagtgagtgccggggccgggcctggggctgcggggcag
cggccccctgcccacgctgactcggccagtggtcccgagagacatgcggggagagcaagg
gatggaagggtgggccggggtgcgggcagggagctgaaggctcgggccgggccagcgggc
atcggacaggtgaggtgggagcagggtcaggtcccaggcggccggaggagcttgaaggct
gggggcccgcgcgcgttcgcgccggagccgctcccggagccccagggtagagagcctctt
gcgcgtccagaccgtcccgaaatctgtgcttcacggtcacggccgggttttgccctccat
ggggctagttttgacccctgtcatgctgtgttttctccaggctgtttcttaagcctgtcc
tcttttatgttcttgcttacccggcctccccgggagggcaaggaaggtggggtgggcctg
cagcctttctccgcggagctgtcgggttggttctttctctcctctgcggttggctcttgc
tcagttgcccgaatgggctggaaagcccatttgcggccaagaagtcaggagaaggctcct
gccccttctattttggtgcctctgctgctgccacttcaggaattgagtgatctacagcgc
gatccacctgctcactgttcagctggacctgtgggagatgactttttattgtccatatgt
tctctactttgtgatcctaatccagatgaccccttagtaccagatattgcacaaatctat
aaatcagacaaagaaaagttcttggctcaggatgactcagatggcttgaggctggaagca
tttggaggtttctccactcatacgttggcaccaggacaggtttgcgaatccccgcctctc
ccgttactatttctgaactccgagctccagccctggcttgaactgagacgctccgctggg
cgcgcagcagccgccgatcggacctcggggtcctggatgcaggactgtctgttacgtaca
gcccttgtgaccgtcacgggcggacaccggccaacgccgggttgggttgtgattgctgga
gttgtgtattgccaggaggctctccgagattggggtcgggtcactgcctcatccaccgga
gcgatggcgtttctccgaagcatgtggggcgtgctgagtgccctgggaaggtctggagca
gagctgtgcaccggctgtggaagtcgactgcgctcccccttcagttttgtgtatttaccg
aggtggttttcatctgtcttggcaagttgtccaaagaaacctgtaagttcttaccttcga
ttttctaaagaacaactacccatatttaaagctcagaacccagatgcaaaaactacagaa
ctaattagaagaattgcccagcgttggagggaacttcctgattcaaagaaaaaaatatat
caagatgcttatagggcggagtggcaggtatataaagaagagataagcagatttaaagaa
cagctaactccaagtcagattatgtctttggaaaaagaaatcatggacaaacatttaaaa
aggaaagctatgacaaaaaaaaaagagttaacactgcttggaaaaccaaaaagacctcgt
tcagcttataacgtttatgtagctgaaagattccaagaagctaagggtgattcaccgcag
gaaaagctgaagactgtaaaggaaaactggaaaaatctgtctgactctgaaaaggaatta
tatattcagcatgctaaagaggacgaaactcgttatcataatgaaatgaagtcttgggaa
gaacaaatgattgaagttggacgaaaggatcttctacgtcgcacaataaagaaacaacga
aaatatggtgctgaggagtgttaa

>gi568815588f:58285548_58495071|GENSCAN_predicted_peptide_6|94_aa
MVILWPIGTVAWDLWMEEGVFIQVQNDMYTIICLALEENLGNTTQDIGMGKDFMTKTPKA
MATKAKIDKWDLIKLKSFCTAKETSIRVNRQSTE

>gi568815588f:58285548_58495071|GENSCAN_predicted_CDS_6|285_bp
atggtcattttgtggccaattggaactgtggcttgggatctttggatggaggaaggtgtg
ttcatacaggtgcaaaatgacatgtatacgattatttgccttgccttagaagaaaaccta
ggcaataccactcaggacataggcatgggcaaagacttcatgactaaaacaccaaaagca
atggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcaca
gcaaaagaaactagcatcagagtgaacaggcagtctacggaatag

>gi568815588f:58285548_58495071|GENSCAN_predicted_peptide_7|443_aa
MKAEIKMFFETNENKDTTYQNLWDTFKAVCRRKFIALNDHKRKQERSKMDTLTSQLKELE
KQEQTHSKASRRQEITKIRAELMEIETQKTLQKINESRSWFSEKINKMERPLARLIKKKR
EKNQIDAIKNDKGDITTDPTEIQTIIREYYKQLYANKLENLEEMNWKKTTLNFIWNQKRA
RIAKTILSQKNKTGGITLSDFKLYYKATVTKTAWYWYQNRDIDQWNRIEPLEIIPHVYNH
LIFDKPDTNKQWGKESLFIKWCCENWLAICRKLKLDPFPTLCTKINSRWIKDLNVRPKTI
KTLEENLGNTIQDIGMGKDFMTKPPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPT
EWEKIFTMYPSDEGLISRIYKELKQIYKKKIKQPHQKVGQGCEQTLLKRRHLCSQQTHEK
MLIIIGHQRNANQNHNEIPSHTS

>gi568815588f:58285548_58495071|GENSCAN_predicted_CDS_7|1332_bp
atgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacataccag
aatctctgggacacatttaaagcagtgtgtagaaggaaatttatagcactaaatgaccac
aagagaaagcaggaaagatctaaaatggacaccctaacatcacaattaaaagaactagag
aaacaagagcaaacacattcaaaagctagtagaaggcaagaaataactaagatcagagca
gaactgatggagatagagacacaaaaaacccttcaaaaaatcaatgaatccaggagctgg
ttttctgaaaagatcaacaaaatggagagaccactagcaagactaataaagaagaaaaga
gagaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccactgatcccaca
gaaatacaaactatcatcagagaatactataaacaactctatgcaaataaactggaaaat
ctagaagaaatgaattggaaaaaaaccactttaaatttcatatggaaccaaaaaagagct
cgcatagccaagacaatcctaagccaaaagaacaaaactggaggcatcacgttatctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagaccaatggaacagaatagagccattggaaataataccacacgtctacaaccat
ctgatctttgacaaacctgacacaaacaagcaatggggaaaggagtccctatttattaaa
tggtgctgcgaaaactggctagccatatgtagaaagctgaaactggatcccttccctaca
ctttgtacaaaaattaattcaagatggattaaagacttaaatgttagacctaaaaccata
aaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttc
atgactaaaccaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagccaaagaaacaaccatcagagtgaacaggcaacctaca
gaatgggagaaaatttttacaatgtacccatctgacgaagggctaatatccagaatctac
aaagaacttaaacaaatttacaagaaaaaaatcaaacaaccccatcaaaaagtgggccaa
ggatgtgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaa
atgctcatcatcattggccatcagagaaatgcaaatcaaaaccacaatgagataccatct
cacaccagttag

>gi568815588f:58285548_58495071|GENSCAN_predicted_peptide_8|221_aa
MGKMSPGHVRDFHGRPSHHRPRGPGGKSGFVGKVQGPHAVCSLGTWCLVSQPLHPWLKGA
NVQLRLWLQKVEAPSLGSFHVVLSLWVHRSQELKFGNLCLDFRRFMETPGCPEFPCVVRE
IREELKEDVRTHHKGDKNLEKRLDEWLTRINSVEKSLNDLMELKTMAQELHDACTSFSSQ
FDQVEERVSVIEDQMNEMKQEEKFREKRVKRNKAAKKYGTM

>gi568815588f:58285548_58495071|GENSCAN_predicted_CDS_8|666_bp
atggggaaaatgtctccaggccatgtcagagactttcacggcagaccctcccatcacagg
cccagaggcccaggaggaaaaagtggttttgtgggcaaggtccagggtccccatgctgtg
tgcagcctagggacttggtgccttgtgtcccagccactccacccatggctgaaaggggcc
aatgtacagctcaggctgtggcttcagaaggtggaagccccaagccttggcagcttccac
gtggtgttgagcctatgggtgcacagaagtcaagaactgaagtttgggaacctttgccta
gatttcagaagatttatggaaacacctggatgcccagaattcccatgtgttgtgcgagag
atccgggaggagctaaaggaggatgttcgaacccatcacaaaggagataaaaaccttgaa
aaaagattagatgaatggctaactagaataaacagtgtagagaagtccttaaatgacctg
atggagctgaaaaccatggcacaagaactacatgatgcatgcacaagcttcagtagccaa
tttgatcaagtggaagaaagggtgtcagtgattgaagatcaaatgaatgaaatgaagcaa
gaagagaagtttagagaaaaaagagtaaaaagaaacaaagccgccaagaaatatgggact
atgtga

>gi568815588f:58285548_58495071|GENSCAN_predicted_peptide_9|222_aa
MNVCKDSDDGEMHGAIEGIMEEYDQKRGQGRFLISEYQLSNSGVKLQTFTVSATAHKGSV
DPKIYGKEQKNKASPAQQETPAACHCWLGQPAFISLSGPTRILLIGPFYRELIGLFHREL
IGAELLAGRAARQSRAVRQHSSVLGRSMGPGAAEQGAALLGEAPAVQEPTAGAKSKREAR
DDDSGGGGSDDDDDDEDDNDDGEETEGEEKEENPVGHLWWSC

>gi568815588f:58285548_58495071|GENSCAN_predicted_CDS_9|669_bp
atgaatgtgtgcaaagacagtgatgatggagaaatgcatggtgctattgaaggcattatg
gaagaatatgaccaaaaaagaggacagggtcgctttcttatcagtgaatatcagctgagc
aattcaggagtgaagctgcagaccttcacggtgagtgctacagctcataaaggtagtgtg
gacccaaagatttacggcaaagagcaaaaaaacaaagcttccccagcgcagcaagagacc
ccagcagcttgccactgttggctggggcagcctgcttttatttccttatctggccccacc
cgcatcctgctgattggtccattttacagagagctgattggtctgtttcatagagagctg
attggggccgagctgctggctggcagagctgcccgccagtcccgcgctgtgcgccagcac
tcctcagtccttgggcggtcgatgggacccggcgctgcggagcagggggcggcactcctt
ggggaggctcctgctgtgcaggagcccacagcgggggccaagtcaaagagggaagctaga
gatgatgatagtggtggtggtggtagtgatgatgatgatgatgatgaagatgataatgat
gatggagaggagacagagggggaagagaaggaggagaatcccgtagggcatctgtggtgg
tcgtgttag

>gi568815588f:58285548_58495071|GENSCAN_predicted_peptide_10|58_aa
MQDETASADVEAAASDPEDPAKIIGECDYTKEIFNVDKTVFYWKYMPSMTFLAREEKL

>gi568815588f:58285548_58495071|GENSCAN_predicted_CDS_10|174_bp
atgcaagatgaaacagcaagtgctgatgtagaagctgcagccagtgatccagaagatcca
gctaaaatcattggtgaatgtgactatactaaagagattttcaatgtagataaaacagtc
ttctattggaagtatatgccatctatgactttcctagctagagaagagaagttg