Result of FASTA (omim) for pF1KB7515
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7515, 127 aa
  1>>>pF1KB7515 127 - 127 aa - 127 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.7437+/-0.000244; mu= 7.9088+/- 0.016
 mean_var=152.5276+/-30.024, 0's: 0 Z-trim(126.3): 49  B-trim: 7 in 2/55
 Lambda= 0.103848
 statistics sampled from 51739 (51807) to 51739 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.879), E-opt: 0.2 (0.607), width:  16
 Scan time:  5.870

The best scores are:                                      opt bits E(85289)
NP_061134 (OMIM: 612470) basic leucine zipper tran ( 127)  867 139.3 1.6e-33
XP_016857172 (OMIM: 612470) PREDICTED: basic leuci ( 138)  453 77.4 7.7e-15
NP_006390 (OMIM: 612476) basic leucine zipper tran ( 125)  327 58.4 3.5e-09
NP_612465 (OMIM: 614983) basic leucine zipper tran ( 274)  249 47.1   2e-05
NP_001193417 (OMIM: 603148) cyclic AMP-dependent t ( 124)  199 39.3   0.002
NP_001193413 (OMIM: 603148) cyclic AMP-dependent t ( 124)  199 39.3   0.002
XP_005273203 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181)  199 39.4  0.0027
NP_001665 (OMIM: 603148) cyclic AMP-dependent tran ( 181)  199 39.4  0.0027
NP_001025458 (OMIM: 603148) cyclic AMP-dependent t ( 181)  199 39.4  0.0027
XP_011507881 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181)  199 39.4  0.0027
XP_016876464 (OMIM: 608657) PREDICTED: jun dimeriz ( 163)  197 39.1  0.0031
NP_001128519 (OMIM: 608657) jun dimerization prote ( 163)  197 39.1  0.0031
NP_569736 (OMIM: 608657) jun dimerization protein  ( 163)  197 39.1  0.0031
XP_016876462 (OMIM: 608657) PREDICTED: jun dimeriz ( 163)  197 39.1  0.0031
NP_001128520 (OMIM: 608657) jun dimerization prote ( 163)  197 39.1  0.0031
XP_016876463 (OMIM: 608657) PREDICTED: jun dimeriz ( 163)  197 39.1  0.0031
XP_005267389 (OMIM: 608657) PREDICTED: jun dimeriz ( 163)  197 39.1  0.0031
NP_001128521 (OMIM: 608657) jun dimerization prote ( 174)  197 39.1  0.0032
XP_016876461 (OMIM: 608657) PREDICTED: jun dimeriz ( 174)  197 39.1  0.0032
XP_016876460 (OMIM: 608657) PREDICTED: jun dimeriz ( 206)  197 39.2  0.0036
NP_001287785 (OMIM: 136515) fos-related antigen 1  ( 205)  191 38.3  0.0067


>>NP_061134 (OMIM: 612470) basic leucine zipper transcri  (127 aa)
 initn: 867 init1: 867 opt: 867  Z-score: 723.0  bits: 139.3 E(85289): 1.6e-33
Smith-Waterman score: 867; 100.0% identity (100.0% similar) in 127 aa overlap (1-127:1-127)

               10        20        30        40        50        60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
               70        80        90       100       110       120

              
pF1KB7 VAGCLPR
       :::::::
NP_061 VAGCLPR
              

>>XP_016857172 (OMIM: 612470) PREDICTED: basic leucine z  (138 aa)
 initn: 605 init1: 437 opt: 453  Z-score: 387.4  bits: 77.4 E(85289): 7.7e-15
Smith-Waterman score: 453; 71.4% identity (81.9% similar) in 105 aa overlap (1-105:1-100)

               10        20        30        40        50        60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
       :::::    : ... .:  .: .:   :.: . .:. :   : .:               
XP_016 DKLHE----LMERTIFLITQIRSLGFILSH-SFSLRPHAYTCIILQLGRGAAPYQELALK
                   70        80         90       100       110     

                              
pF1KB7 VAGCLPR                
                              
XP_016 ASKDLSEEWATIPCSCLCRGWCV
         120       130        

>>NP_006390 (OMIM: 612476) basic leucine zipper transcri  (125 aa)
 initn: 333 init1: 295 opt: 327  Z-score: 285.9  bits: 58.4 E(85289): 3.5e-09
Smith-Waterman score: 327; 54.3% identity (77.2% similar) in 92 aa overlap (25-116:16-104)

               10        20        30        40        50        60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
                               : : .:.  :: :.:.::::::.:::.::..:::::
NP_006          MPHSSDSSDSSFSRSPPPGKQDSSDDVRRVQRREKNRIAAQKSRQRQTQKA
                        10        20        30        40        50 

               70        80        90       100       110       120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
       : :: : :.::..:. ::.:: .::::::..: .:. :: .: .:      .: ::    
NP_006 DTLHLESEDLEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAAS---TPSPPEVVY
              60        70        80        90          100        

                        
pF1KB7 VAGCLPR          
                        
NP_006 SAHAFHQPHVSSPRFQP
      110       120     

>>NP_612465 (OMIM: 614983) basic leucine zipper transcri  (274 aa)
 initn: 270 init1: 224 opt: 249  Z-score: 218.4  bits: 47.1 E(85289): 2e-05
Smith-Waterman score: 249; 47.4% identity (84.2% similar) in 76 aa overlap (29-104:12-86)

               10        20        30        40        50        60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
                                   : .:....:.... .:::.::::::.:.:.::
NP_612                  MHLCGGNGLLTQTDPKEQQRQLKK-QKNRAAAQRSRQKHTDKA
                                10        20         30        40  

               70        80        90       100       110       120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
       : ::...::::..:  ::.:: .:  ::   ...:. ::..::.                
NP_612 DALHQQHESLEKDNLALRKEIQSLQAELAWWSRTLHVHERLCPMDCASCSAPGLLGCWDQ
             50        60        70        80        90       100  

                                                                   
pF1KB7 VAGCLPR                                                     
                                                                   
NP_612 AEGLLGPGPQGQHGCREQLELFQTPGSCYPAQPLSPGPQPHDSPSLLQCPLPSLSLGPAV
            110       120       130       140       150       160  

>>NP_001193417 (OMIM: 603148) cyclic AMP-dependent trans  (124 aa)
 initn: 283 init1: 198 opt: 199  Z-score: 182.3  bits: 39.3 E(85289): 0.002
Smith-Waterman score: 199; 41.7% identity (75.0% similar) in 72 aa overlap (31-102:25-96)

               10        20        30        40        50        60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
                                     .::.:.:: ::::.:..:: . :.:. .:.
NP_001       MSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKT
                     10        20        30        40        50    

               70        80        90       100       110       120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
       . :..: :.::. :. :. .: .: .: .::   :. :.  :                  
NP_001 ECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFI
           60        70        80        90       100       110    

                 
pF1KB7 VAGCLPR   
                 
NP_001 QQIKEGTLQS
          120    

>>NP_001193413 (OMIM: 603148) cyclic AMP-dependent trans  (124 aa)
 initn: 283 init1: 198 opt: 199  Z-score: 182.3  bits: 39.3 E(85289): 0.002
Smith-Waterman score: 199; 41.7% identity (75.0% similar) in 72 aa overlap (31-102:25-96)

               10        20        30        40        50        60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
                                     .::.:.:: ::::.:..:: . :.:. .:.
NP_001       MSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKT
                     10        20        30        40        50    

               70        80        90       100       110       120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
       . :..: :.::. :. :. .: .: .: .::   :. :.  :                  
NP_001 ECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFI
           60        70        80        90       100       110    

                 
pF1KB7 VAGCLPR   
                 
NP_001 QQIKEGTLQS
          120    

>>XP_005273203 (OMIM: 603148) PREDICTED: cyclic AMP-depe  (181 aa)
 initn: 268 init1: 198 opt: 199  Z-score: 180.2  bits: 39.4 E(85289): 0.0027
Smith-Waterman score: 199; 41.7% identity (75.0% similar) in 72 aa overlap (31-102:82-153)

               10        20        30        40        50        60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
                                     .::.:.:: ::::.:..:: . :.:. .:.
XP_005 KHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKT
              60        70        80        90       100       110 

               70        80        90       100       110       120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
       . :..: :.::. :. :. .: .: .: .::   :. :.  :                  
XP_005 ECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFI
             120       130       140       150       160       170 

                 
pF1KB7 VAGCLPR   
                 
XP_005 QQIKEGTLQS
             180 

>>NP_001665 (OMIM: 603148) cyclic AMP-dependent transcri  (181 aa)
 initn: 268 init1: 198 opt: 199  Z-score: 180.2  bits: 39.4 E(85289): 0.0027
Smith-Waterman score: 199; 41.7% identity (75.0% similar) in 72 aa overlap (31-102:82-153)

               10        20        30        40        50        60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
                                     .::.:.:: ::::.:..:: . :.:. .:.
NP_001 KHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKT
              60        70        80        90       100       110 

               70        80        90       100       110       120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
       . :..: :.::. :. :. .: .: .: .::   :. :.  :                  
NP_001 ECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFI
             120       130       140       150       160       170 

                 
pF1KB7 VAGCLPR   
                 
NP_001 QQIKEGTLQS
             180 

>>NP_001025458 (OMIM: 603148) cyclic AMP-dependent trans  (181 aa)
 initn: 268 init1: 198 opt: 199  Z-score: 180.2  bits: 39.4 E(85289): 0.0027
Smith-Waterman score: 199; 41.7% identity (75.0% similar) in 72 aa overlap (31-102:82-153)

               10        20        30        40        50        60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
                                     .::.:.:: ::::.:..:: . :.:. .:.
NP_001 KHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKT
              60        70        80        90       100       110 

               70        80        90       100       110       120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
       . :..: :.::. :. :. .: .: .: .::   :. :.  :                  
NP_001 ECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFI
             120       130       140       150       160       170 

                 
pF1KB7 VAGCLPR   
                 
NP_001 QQIKEGTLQS
             180 

>>XP_011507881 (OMIM: 603148) PREDICTED: cyclic AMP-depe  (181 aa)
 initn: 268 init1: 198 opt: 199  Z-score: 180.2  bits: 39.4 E(85289): 0.0027
Smith-Waterman score: 199; 41.7% identity (75.0% similar) in 72 aa overlap (31-102:82-153)

               10        20        30        40        50        60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
                                     .::.:.:: ::::.:..:: . :.:. .:.
XP_011 KHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKT
              60        70        80        90       100       110 

               70        80        90       100       110       120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
       . :..: :.::. :. :. .: .: .: .::   :. :.  :                  
XP_011 ECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFI
             120       130       140       150       160       170 

                 
pF1KB7 VAGCLPR   
                 
XP_011 QQIKEGTLQS
             180 




127 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 08:21:58 2016 done: Fri Nov  4 08:21:58 2016
 Total Scan time:  5.870 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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