Result of FASTA (omim) for
pF1KB7514
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7514, 245 aa
1>>>pF1KB7514 245 - 245 aa - 245 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0046+/-0.000266; mu= 14.1417+/- 0.017
mean_var=132.8983+/-26.872, 0's: 0 Z-trim(123.2): 301 B-trim: 45 in 1/54
Lambda= 0.111254
statistics sampled from 42200 (42549) to 42200 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.817), E-opt: 0.2 (0.499), width: 16
Scan time: 8.030
The best scores are: opt bits E(85289)
NP_001290437 (OMIM: 612019) intestine-specific hom ( 245) 1733 288.3 8.4e-78
NP_038463 (OMIM: 601881,611038) retinal homeobox p ( 346) 378 71.0 3.1e-12
NP_116142 (OMIM: 605726,610362,610381,613757) reti ( 184) 358 67.5 1.9e-11
NP_001306003 (OMIM: 605726,610362,610381,613757) r ( 230) 358 67.6 2.2e-11
NP_068745 (OMIM: 605420,609597,613451,615529) home ( 411) 350 66.6 7.9e-11
NP_006483 (OMIM: 136760,606014) homeobox protein a ( 343) 339 64.7 2.4e-10
NP_620689 (OMIM: 300004,300215,300382,300419,30835 ( 562) 332 63.8 7.2e-10
NP_852126 (OMIM: 122880,148820,193500,268220,60659 ( 403) 321 61.9 2e-09
NP_852125 (OMIM: 122880,148820,193500,268220,60659 ( 407) 321 61.9 2e-09
NP_852122 (OMIM: 122880,148820,193500,268220,60659 ( 479) 321 62.0 2.2e-09
NP_001120838 (OMIM: 122880,148820,193500,268220,60 ( 483) 321 62.0 2.2e-09
NP_852123 (OMIM: 122880,148820,193500,268220,60659 ( 484) 321 62.0 2.2e-09
NP_852124 (OMIM: 122880,148820,193500,268220,60659 ( 505) 321 62.0 2.3e-09
NP_703149 (OMIM: 300154) homeobox protein ESX1 [Ho ( 406) 319 61.6 2.5e-09
NP_005160 (OMIM: 602078,602753) paired mesoderm ho ( 284) 316 60.9 2.7e-09
NP_039236 (OMIM: 167410,268220) paired box protein ( 518) 318 61.5 3.2e-09
NP_115485 (OMIM: 604529) homeobox protein orthoped ( 325) 315 60.8 3.3e-09
NP_006875 (OMIM: 602504) short stature homeobox pr ( 331) 313 60.5 4.2e-09
NP_001297090 (OMIM: 106210,120430,136520,148190,16 ( 286) 312 60.3 4.2e-09
NP_001297089 (OMIM: 106210,120430,136520,148190,16 ( 286) 312 60.3 4.2e-09
NP_001128726 (OMIM: 167410,268220) paired box prot ( 505) 314 60.9 5e-09
NP_002575 (OMIM: 167410,268220) paired box protein ( 520) 314 60.9 5.1e-09
XP_011537084 (OMIM: 601527,613456) PREDICTED: ALX ( 231) 309 59.7 5.1e-09
NP_001245393 (OMIM: 106210,120430,136520,148190,16 ( 422) 312 60.5 5.5e-09
NP_001121084 (OMIM: 106210,120430,136520,148190,16 ( 422) 312 60.5 5.5e-09
NP_001245394 (OMIM: 106210,120430,136520,148190,16 ( 422) 312 60.5 5.5e-09
NP_000271 (OMIM: 106210,120430,136520,148190,16555 ( 422) 312 60.5 5.5e-09
NP_001297087 (OMIM: 106210,120430,136520,148190,16 ( 436) 312 60.5 5.6e-09
NP_001245392 (OMIM: 106210,120430,136520,148190,16 ( 436) 312 60.5 5.6e-09
NP_001245391 (OMIM: 106210,120430,136520,148190,16 ( 436) 312 60.5 5.6e-09
NP_001595 (OMIM: 106210,120430,136520,148190,16555 ( 436) 312 60.5 5.6e-09
NP_001297088 (OMIM: 106210,120430,136520,148190,16 ( 401) 311 60.3 5.9e-09
NP_008913 (OMIM: 601527,613456) ALX homeobox prote ( 326) 309 59.9 6.5e-09
NP_008833 (OMIM: 167420,202650) paired mesoderm ho ( 217) 304 58.9 8.6e-09
NP_073207 (OMIM: 167420,202650) paired mesoderm ho ( 245) 304 58.9 9.3e-09
NP_057391 (OMIM: 604675) paired mesoderm homeobox ( 253) 303 58.8 1.1e-08
NP_005020 (OMIM: 107250,602669,610623) pituitary h ( 302) 304 59.0 1.1e-08
NP_002644 (OMIM: 119800,186550,602149) pituitary h ( 314) 302 58.7 1.4e-08
XP_016883326 (OMIM: 122000,148300,605020,614195) P ( 280) 301 58.5 1.4e-08
NP_001243201 (OMIM: 122000,148300,605020,614195) v ( 301) 301 58.5 1.5e-08
NP_055403 (OMIM: 122000,148300,605020,614195) visu ( 365) 301 58.6 1.7e-08
NP_001257453 (OMIM: 600037,610125,613986) homeobox ( 289) 299 58.2 1.8e-08
NP_758840 (OMIM: 600037,610125,613986) homeobox pr ( 289) 299 58.2 1.8e-08
NP_001257452 (OMIM: 600037,610125,613986) homeobox ( 289) 299 58.2 1.8e-08
XP_006711451 (OMIM: 167420,202650) PREDICTED: pair ( 198) 295 57.4 2.2e-08
NP_001157150 (OMIM: 602504) short stature homeobox ( 319) 297 57.9 2.4e-08
NP_001263380 (OMIM: 606701) dorsal root ganglia ho ( 263) 293 57.2 3.3e-08
NP_003915 (OMIM: 209880,603851,613013) paired meso ( 314) 293 57.3 3.7e-08
NP_006252 (OMIM: 262600,601538) homeobox protein p ( 226) 288 56.3 5.2e-08
XP_016870292 (OMIM: 604675) PREDICTED: paired meso ( 193) 287 56.1 5.3e-08
>>NP_001290437 (OMIM: 612019) intestine-specific homeobo (245 aa)
initn: 1733 init1: 1733 opt: 1733 Z-score: 1517.8 bits: 288.3 E(85289): 8.4e-78
Smith-Waterman score: 1733; 100.0% identity (100.0% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KB7 MCAEVGPALCRGMERNSLGCCEAPKKLSLSFSIEAILKRPARRSDMDRPEGPGEEGPGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCAEVGPALCRGMERNSLGCCEAPKKLSLSFSIEAILKRPARRSDMDRPEGPGEEGPGEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 AASGSGLEKPPKDQPQEGRKSKRRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AASGSGLEKPPKDQPQEGRKSKRRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARIN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LPEARVQIWFQNQRAKWRKQEKIGNLGAPQQLSEASVALPTNLDVAGPTWTSTALRRLAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPEARVQIWFQNQRAKWRKQEKIGNLGAPQQLSEASVALPTNLDVAGPTWTSTALRRLAP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PTSCCPSAQDQLASAWFPAWITLLPAHPWETQPVPGLPIHQTCIPVLCILPPPHPKWGSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTSCCPSAQDQLASAWFPAWITLLPAHPWETQPVPGLPIHQTCIPVLCILPPPHPKWGSI
190 200 210 220 230 240
pF1KB7 CATST
:::::
NP_001 CATST
>>NP_038463 (OMIM: 601881,611038) retinal homeobox prote (346 aa)
initn: 429 init1: 344 opt: 378 Z-score: 340.6 bits: 71.0 E(85289): 3.1e-12
Smith-Waterman score: 379; 35.3% identity (58.9% similar) in 224 aa overlap (20-235:73-281)
10 20 30 40
pF1KB7 MCAEVGPALCRGMERNSLGCCEAPKKLSLSFSIEAILKRPARRSDMDRP
: .::.. : : :: . . ::
NP_038 KDDGILGTFPAERGARGAKERDRRLGARPACPKAPEEGSEPSPPPA--PAPAPEYEAPRP
50 60 70 80 90 100
50 60 70 80 90 100
pF1KB7 EGPGEEG-----PGEAAASGSGLEK-PPKDQPQEGRKSKRRVRTTFTTEQLHELEKIFHF
: : : :: .. ..: : ..:: .:..:: :::::: ::::::. :.
NP_038 YCPKEPGEARPSPGLPVGPATGEAKLSEEEQP---KKKHRRNRTTFTTYQLHELERAFEK
110 120 130 140 150
110 120 130 140 150 160
pF1KB7 THYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQEKIGNLGAPQQLSEASVALPTNL
.:::::. : .::...::::.:::.::::.:::::.:::. . ..:... . ..
NP_038 SHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEV--SSMKLQDSPL---LSF
160 170 180 190 200 210
170 180 190 200 210 220
pF1KB7 DVAGPTWTSTALRRLAPPTSCCPSAQDQLASAWF-PAWITLLPAHPWET-QPVPGLPIHQ
. . :. : . : .: .. :.. .:. : ::. . : .::.
NP_038 SRSPPSATLSPLGA-GPGSGGGPAGGALPLESWLGPP----LPGGGATALQSLPGFGPPA
220 230 240 250 260
230 240
pF1KB7 TCIPVLCILPPPHPKWGSICATST
.:. ::: :
NP_038 QSLPASYTPPPPPPPFLNSPPLGPGLQPLAPPPPSYPCGPGFGDKFPLDEADPRNSSIAA
270 280 290 300 310 320
>>NP_116142 (OMIM: 605726,610362,610381,613757) retina a (184 aa)
initn: 441 init1: 302 opt: 358 Z-score: 326.5 bits: 67.5 E(85289): 1.9e-11
Smith-Waterman score: 358; 39.2% identity (63.6% similar) in 176 aa overlap (57-227:5-169)
30 40 50 60 70 80
pF1KB7 LSLSFSIEAILKRPARRSDMDRPEGPGEEGPGEAAASGSGLEKPPKDQPQEGRKSKRRVR
:::. :. .: : .. : .:..:: :
NP_116 MFLSPGEGPATEGGGLGPGEEAP---KKKHRRNR
10 20 30
90 100 110 120 130 140
pF1KB7 TTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQEKI---
::::: :::.::. :. .:::::. : .:::...:::.:::.::::.:::::.::..
NP_116 TTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESG
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB7 -GNLGAPQQLSEASVALPTNLDVAGPTWTSTALRR-LAPPTSCCPSAQDQLASAWFPAWI
: ..::. : :: ::: : : : :. :.: :. :. . :.
NP_116 SGAVAAPR-LPEAP-ALP----FARPPAMSLPLEPWLGPGPPAVPGLPRLLGPG--PGLQ
100 110 120 130 140
210 220 230 240
pF1KB7 TLLPAHPWETQPVPGLPIHQTCIPVLCILPPPHPKWGSICATST
. . : . . :. .... . .:
NP_116 ASFGPHAFAPTFADGFALEEASLRLLAKEHAQALDRAWPPA
150 160 170 180
>>NP_001306003 (OMIM: 605726,610362,610381,613757) retin (230 aa)
initn: 350 init1: 302 opt: 358 Z-score: 325.4 bits: 67.6 E(85289): 2.2e-11
Smith-Waterman score: 358; 39.2% identity (63.6% similar) in 176 aa overlap (57-227:51-215)
30 40 50 60 70 80
pF1KB7 LSLSFSIEAILKRPARRSDMDRPEGPGEEGPGEAAASGSGLEKPPKDQPQEGRKSKRRVR
:::. :. .: : .. : .:..:: :
NP_001 PALSLPVAPPAVSPPSVPLPSHQVGAMFLSPGEGPATEGGGLGPGEEAP---KKKHRRNR
30 40 50 60 70
90 100 110 120 130 140
pF1KB7 TTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQEKI---
::::: :::.::. :. .:::::. : .:::...:::.:::.::::.:::::.::..
NP_001 TTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESG
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB7 -GNLGAPQQLSEASVALPTNLDVAGPTWTSTALRR-LAPPTSCCPSAQDQLASAWFPAWI
: ..::. : :: ::: : : : :. :.: :. :. . :.
NP_001 SGAVAAPR-LPEAP-ALP----FARPPAMSLPLEPWLGPGPPAVPGLPRLLGPG--PGLQ
140 150 160 170 180
210 220 230 240
pF1KB7 TLLPAHPWETQPVPGLPIHQTCIPVLCILPPPHPKWGSICATST
. . : . . :. .... . .:
NP_001 ASFGPHAFAPTFADGFALEEASLRLLAKEHAQALDRAWPPA
190 200 210 220 230
>>NP_068745 (OMIM: 605420,609597,613451,615529) homeobox (411 aa)
initn: 317 init1: 317 opt: 350 Z-score: 315.4 bits: 66.6 E(85289): 7.9e-11
Smith-Waterman score: 357; 35.6% identity (55.0% similar) in 222 aa overlap (19-208:127-338)
10 20 30 40
pF1KB7 MCAEVGPALCRGMERNSLGCCEAPKKLSL-----SFSIEAILKRP--A
: :..: :: : . : :. : :
NP_068 PQPQPPPQPQPQQQQPQPQPPAQPHLYLQRGACKTPPDGSLKLQEGSSGHSAALQVPCYA
100 110 120 130 140 150
50 60 70 80
pF1KB7 RRSDMDRPEGP------------------GEEGPGEAAASGSGLEKPPKDQPQEGRKSK-
..:.. .:: : : .:: . :.: : .: . .:. :.:
NP_068 KESSLGEPELPPDSDTVGMDSSYLSVKEAGVKGPQDRASS--DLPSPLEKADSESNKGKK
160 170 180 190 200 210
90 100 110 120 130 140
pF1KB7 RRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQEK
:: :::::. ::.::::.:. ::::::. : ::: : .: :::::.::::.::::::.:.
NP_068 RRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRER
220 230 240 250 260 270
150 160 170 180 190
pF1KB7 IGNLGAPQQLSEASVALP------TNLDVAGPTWTSTALRRLAPPTSCCPSAQDQLASAW
.:.. . .. :: . .. .:.: .. : :. : : . .
NP_068 FGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGN--NGAASPVPACVVPCDPVPACM
280 290 300 310 320 330
200 210 220 230 240
pF1KB7 FPAWITLLPAHPWETQPVPGLPIHQTCIPVLCILPPPHPKWGSICATST
: :::
NP_068 SPH------AHPPGSGASSVTDFLSVSGAGSHVGQTHMGSLFGAASLSPGLNGYELNGEP
340 350 360 370 380
>>NP_006483 (OMIM: 136760,606014) homeobox protein arist (343 aa)
initn: 414 init1: 307 opt: 339 Z-score: 306.8 bits: 64.7 E(85289): 2.4e-10
Smith-Waterman score: 353; 36.1% identity (53.9% similar) in 241 aa overlap (6-240:78-281)
10 20 30
pF1KB7 MCAEVGPALCRGMERNSLGCCEAPKKLSLSFSIEA
:::: : . : :: .: : . :.
NP_006 LTRFPACGPLEPYLPEPAKPPAKYLQDLGPGPALNGGHFYE--GPAEAEEKTSKAASFPQ
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB7 ILKRPARRSDMDRPEG-PGEEGPGEAAAS---GSGLEKPPKDQPQEGRKSKRRVRTTFTT
: : . : : . : :: :. . :: : . . .....::: ::::.:
NP_006 -LPLDCRGGPRDGPSNLQGSPGPCLASLHLPLSPGL--PDSMELAKNKSKKRRNRTTFST
110 120 130 140 150 160
100 110 120 130 140 150
pF1KB7 EQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQEKIGNLGAPQQ
::.::::.:. ::::::. : ::: : .: :::::.::::.::::::.:. : .
NP_006 FQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERYG------K
170 180 190 200 210
160 170 180 190 200 210
pF1KB7 LSEASVALPTNLDVAGPTWTSTALRRLAPPTSCCPSAQDQLASAWFPAWITLLPAHPWET
..:. . . :.. . : :. :. :..: : : :
NP_006 IQEGRNPFTAAYDIS-----------VLPRTDSHPQLQNSL---W---------ASP--G
220 230 240 250
220 230 240
pF1KB7 QPVPGLP--IHQTCIPVLCILPPPHPKWGSICATST
. :: : . :: :. : ::. ::.
NP_006 SGSPGGPCLVSPEGIPSPCMSPYSHPH-GSVAGFMGVPAPSAAHPGIYSIHGFPPTLGGH
260 270 280 290 300 310
NP_006 SFEPSSDGDYKSPSLVSLRVKPKEPPGLLNWTT
320 330 340
>>NP_620689 (OMIM: 300004,300215,300382,300419,308350,30 (562 aa)
initn: 355 init1: 293 opt: 332 Z-score: 298.2 bits: 63.8 E(85289): 7.2e-10
Smith-Waterman score: 332; 43.4% identity (60.0% similar) in 145 aa overlap (76-216:320-449)
50 60 70 80 90 100
pF1KB7 MDRPEGPGEEGPGEAAASGSGLEKPPKDQPQEG--RKSKRRVRTTFTTEQLHELEKIFHF
.:: ....:: :::::. ::.:::. :.
NP_620 SPKEELLLHPEDAEGKDGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQK
290 300 310 320 330 340
110 120 130 140 150 160
pF1KB7 THYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQEKIGNLGAPQQLSEASVALPTNL
:::::: : .:: :..: :::::.::::.::::::.:: : . . : .:
NP_620 THYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAG-----------AQTHPPGL
350 360 370 380 390
170 180 190 200 210 220
pF1KB7 DVAGPTWTSTALRRLAP--PTSCCPSAQDQLASAWFPAWITLLPAHPWETQPVPGLPIHQ
:: .: . :.: .: : . : ::: : . : : : ::
NP_620 PFPGPL---SATHPLSPYLDASPFPPHHPALDSAWTAAAAAAAAAFP-SLPPPPGSASLP
400 410 420 430 440 450
230 240
pF1KB7 TCIPVLCILPPPHPKWGSICATST
NP_620 PSGAPLGLSTFLGAAVFRHPAFISPAFGRLFSTMAPLTSASTAAALLRQPTPAVEGAVAS
460 470 480 490 500 510
>>NP_852126 (OMIM: 122880,148820,193500,268220,606597) p (403 aa)
initn: 367 init1: 277 opt: 321 Z-score: 290.4 bits: 61.9 E(85289): 2e-09
Smith-Waterman score: 333; 34.5% identity (58.2% similar) in 232 aa overlap (8-225:141-345)
10 20 30
pF1KB7 MCAEVGPALCRGMERNSLGCCEAPKKLSLSFSIEAIL
:.: .::.. :. :.: ... .
NP_852 TPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC---DRNTV-----PSVSSISRILRSKF
120 130 140 150 160
40 50 60 70 80
pF1KB7 -KRPARRSDMDRPEGPGEEGPGEAAASGSGL--EKPPKDQPQEG-----------RKSKR
: ...:..: : .::. .: : .:. :. : .:: ....:
NP_852 GKGEEEEADLERKE--AEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQR
170 180 190 200 210 220
90 100 110 120 130 140
pF1KB7 RVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQEKI
: :::::.:::.:::. :. :::::.. : .:: : .: :::::.::.:.::.::::
NP_852 RSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGA
230 240 250 260 270 280
150 160 170 180 190 200
pF1KB7 GNLGAPQQLSEASVALPTNLDVAGPTWTSTALRRLAPPTSCCPSAQDQLASAWFPAWITL
..: : ..: .. :: . :: . : . :: :.. : .: :. .
NP_852 NQLMAFNHLIPGGFP-PTAM----PTLPTYQLSE----TSYQPTSIPQAVSD--PSSTVH
290 300 310 320
210 220 230 240
pF1KB7 LPAHPWETQPVPGLPIHQTCIPVLCILPPPHPKWGSICATST
: ::.: .::. ::
NP_852 RP------QPLPPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPT
330 340 350 360 370 380
>>NP_852125 (OMIM: 122880,148820,193500,268220,606597) p (407 aa)
initn: 367 init1: 277 opt: 321 Z-score: 290.3 bits: 61.9 E(85289): 2e-09
Smith-Waterman score: 333; 34.5% identity (58.2% similar) in 232 aa overlap (8-225:141-345)
10 20 30
pF1KB7 MCAEVGPALCRGMERNSLGCCEAPKKLSLSFSIEAIL
:.: .::.. :. :.: ... .
NP_852 TPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC---DRNTV-----PSVSSISRILRSKF
120 130 140 150 160
40 50 60 70 80
pF1KB7 -KRPARRSDMDRPEGPGEEGPGEAAASGSGL--EKPPKDQPQEG-----------RKSKR
: ...:..: : .::. .: : .:. :. : .:: ....:
NP_852 GKGEEEEADLERKE--AEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQR
170 180 190 200 210 220
90 100 110 120 130 140
pF1KB7 RVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQEKI
: :::::.:::.:::. :. :::::.. : .:: : .: :::::.::.:.::.::::
NP_852 RSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGA
230 240 250 260 270 280
150 160 170 180 190 200
pF1KB7 GNLGAPQQLSEASVALPTNLDVAGPTWTSTALRRLAPPTSCCPSAQDQLASAWFPAWITL
..: : ..: .. :: . :: . : . :: :.. : .: :. .
NP_852 NQLMAFNHLIPGGFP-PTAM----PTLPTYQLSE----TSYQPTSIPQAVSD--PSSTVH
290 300 310 320
210 220 230 240
pF1KB7 LPAHPWETQPVPGLPIHQTCIPVLCILPPPHPKWGSICATST
: ::.: .::. ::
NP_852 RP------QPLPPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPT
330 340 350 360 370 380
>>NP_852122 (OMIM: 122880,148820,193500,268220,606597) p (479 aa)
initn: 367 init1: 277 opt: 321 Z-score: 289.5 bits: 62.0 E(85289): 2.2e-09
Smith-Waterman score: 333; 34.5% identity (58.2% similar) in 232 aa overlap (8-225:141-345)
10 20 30
pF1KB7 MCAEVGPALCRGMERNSLGCCEAPKKLSLSFSIEAIL
:.: .::.. :. :.: ... .
NP_852 TPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC---DRNTV-----PSVSSISRILRSKF
120 130 140 150 160
40 50 60 70 80
pF1KB7 -KRPARRSDMDRPEGPGEEGPGEAAASGSGL--EKPPKDQPQEG-----------RKSKR
: ...:..: : .::. .: : .:. :. : .:: ....:
NP_852 GKGEEEEADLERKE--AEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQR
170 180 190 200 210 220
90 100 110 120 130 140
pF1KB7 RVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQEKI
: :::::.:::.:::. :. :::::.. : .:: : .: :::::.::.:.::.::::
NP_852 RSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGA
230 240 250 260 270 280
150 160 170 180 190 200
pF1KB7 GNLGAPQQLSEASVALPTNLDVAGPTWTSTALRRLAPPTSCCPSAQDQLASAWFPAWITL
..: : ..: .. :: . :: . : . :: :.. : .: :. .
NP_852 NQLMAFNHLIPGGFP-PTAM----PTLPTYQLSE----TSYQPTSIPQAVSD--PSSTVH
290 300 310 320
210 220 230 240
pF1KB7 LPAHPWETQPVPGLPIHQTCIPVLCILPPPHPKWGSICATST
: ::.: .::. ::
NP_852 RP------QPLPPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPT
330 340 350 360 370 380
245 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 08:21:23 2016 done: Fri Nov 4 08:21:25 2016
Total Scan time: 8.030 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]