GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:21:49

Sequence gi568815576f:34967088_35185690 : 218603 bp : 45.93% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5792   5895  104  0  2   43  121    79 0.521   6.59
 1.02 Intr +  21876  21987  112  2  1   12   87    93 0.050   1.55
 1.03 Intr +  41827  41863   37  2  1   95   72    37 0.045   0.12
 1.04 Term +  51489  51636  148  0  1  101   38    91 0.200   2.77
 1.05 PlyA +  54944  54949    6                               1.05

 2.07 PlyA -  55003  54998    6                               1.05
 2.06 Term -  59401  58786  616  0  1   73   48   165 0.495   4.94
 2.05 Intr -  63275  63004  272  2  2   27   71   165 0.209   5.04
 2.04 Intr -  82006  81672  335  2  2   84   68   118 0.156   4.69
 2.03 Intr -  82510  82091  420  2  0   81   66   147 0.044   5.72
 2.02 Intr -  83421  82678  744  1  0   70   63   195 0.016   6.62
 2.01 Init -  89525  89444   82  2  1   55   91    21 0.493   0.24
 2.00 Prom -  93345  93306   40                              -4.56

 3.00 Prom +  95135  95174   40                              -1.06
 3.01 Init +  99747  99772   26  2  2   90   95    -5 0.157  -0.47
 3.02 Intr + 100033 100229  197  1  2   92  110    56 0.499   7.26
 3.03 Intr + 115431 115582  152  1  2   80   92   209 0.899  20.38
 3.04 Intr + 117296 117412  117  1  0   77   87   167 0.924  16.16
 3.05 Term + 130231 130293   63  0  0   67   43    88 0.074   0.09
 3.06 PlyA + 131334 131339    6                               1.05

 4.06 PlyA - 131800 131795    6                               1.05
 4.05 Term - 133201 133163   39  1  0   83   42    43 0.020  -3.61
 4.04 Intr - 136723 136697   27  1  0  103   62    72 0.084   4.41
 4.03 Intr - 150119 150075   45  2  0   57   95    56 0.088   1.81
 4.02 Intr - 151727 151602  126  2  0   96   55    38 0.068   2.18
 4.01 Init - 160651 160607   45  1  0   60  111    30 0.106   3.18
 4.00 Prom - 165677 165638   40                              -4.26

 5.00 Prom + 174858 174897   40                              -3.26
 5.01 Init + 175150 175286  137  0  2   57   79    33 0.259  -1.05
 5.02 Term + 179475 179619  145  0  1   30   47   196 0.645   7.08
 5.03 PlyA + 180612 180617    6                               1.05

 6.00 Prom + 183391 183430   40                              -5.66
 6.01 Init + 184030 184109   80  0  2   74   37    59 0.053  -0.06
 6.02 Intr + 187510 187681  172  1  1   34  115    71 0.096   4.35
 6.03 Term + 199677 199913  237  2  0   62   47   178 0.739   7.27
 6.04 PlyA + 200488 200493    6                               1.05

 7.00 Prom + 201022 201061   40                              -4.96
 7.01 Sngl + 201484 202167  684  0  0   66   47   262 0.703  16.09
 7.02 PlyA + 202317 202322    6                               1.05

 8.05 PlyA - 203334 203329    6                               1.05
 8.04 Term - 211502 211337  166  1  1   80   53   112 0.431   4.29
 8.03 Intr - 211926 211862   65  0  2   41  107    51 0.434  -0.18
 8.02 Intr - 214630 214469  162  1  0  101   60   135 0.610  12.17
 8.01 Init - 216296 216153  144  2  0   32   90    87 0.577   3.42

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  27186  27251   66  2  0   67   95    73 0.843   6.97


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:34967088_35185690|GENSCAN_predicted_peptide_1|133_aa
XVPLFLDDQEAGVYWQATQRWLLQQAQRKKHAEWKNGSDRNKTEVDHLFGRHNFVMFGVT
TVYKRKMMETYEEPSLPINPQTSTHFPVPLGSNPMSLLWSIRPYISYGVCSHATMVLTLR
PRMMESHYPECSR

>gi568815576f:34967088_35185690|GENSCAN_predicted_CDS_1|402_bp
naggtacccctgttcttggatgatcaagaggcaggggtctactggcaggcaactcagagg
tggttactgcagcaagcccagaggaaaaagcatgcagaatggaagaatggatcagacaga
aataagactgaagtcgaccacctgtttggtcgtcacaattttgtgatgtttggtgtcaca
actgtctataagagaaagatgatggagacctatgaagaaccatctttgcccatcaaccct
caaacaagcacacacttcccagtacccctgggatcaaatcccatgtccttgctgtggtcc
atcaggccctacatcagctatggggtctgctcccatgccacgatggtcctcactctaaga
cccaggatgatggagagtcactatccagaatgtagcagatga

>gi568815576f:34967088_35185690|GENSCAN_predicted_peptide_2|822_aa
MQWDSFPYHSLELSSWEKLGFVSQKKTGIPTGVLTGILTGILTGIPTCILVGILTGNPTG
ILTSILSGIPTGILTGILTGIPTCILISILTGNHTGILTGILSGIPTGILTGIPTGILTD
ILTGNHTGILTGILSGIPTGILTGIPTGILTGIHTGILTGIPTGISTGIPTDISIGIPIG
ISKGISIGFPTSIPTGILTGILTGIPTCILIGILTGNHTGILTSILSGIPTGILTGIHTG
ILTGNRTGILTGIPTDISTDIPTAISIGIPIGISKGILTDISIGIPIGISKGISAGFPTS
IRTSIPTGILTGIHTGILTGIHTGILSSIPTGIPTGILTGIHTGILSSIPTGILTGIYTG
IPTGIPTGIPTRIPIGIPTDISIGIPVGISKGISIGFPTSIPTGIPTGILTGIHTGIPTD
ISIGIPIGISKGTSTGFPTSIPTGILTGIPTGFLTDISTGIPTGISRGIPIGLSKRISTG
ISIGIPKGILTGIPTGILIGIHRGILMGFFTGIPMGIHTGILTGSPQESSGWHLAGAPLG
QSFQKKEQAAVFAVLQPLLVIPRQTVWSGPPATPADLQQRGLTVRRKTNKQKEIASTSTK
RMSTQKPHQKVTNIKDQRIRKSYFKFHMEPKKSLYSQDNLKQKNKAGGITLPDFKLYYKA
TVTKTAWYWYQNRYIDQWNRTEALEIMPHIYNHLIFDKPDKNKQWGKDSLFNKWCWENWL
AICRKLKLDPFLTPYKKINSRWIKDFNVRPKTIKTLEENLGNTIQDIGIGKDFVTKTPKA
IATKAKIDKWDLIKELPHSKRNYHQSEQTTYRMGENFCYLSI

>gi568815576f:34967088_35185690|GENSCAN_predicted_CDS_2|2469_bp
atgcagtgggacagctttccttaccactctctggagcttagttcctgggaaaaattgggg
tttgtcagccagaagaagacaggtatccccacaggggttctcacaggcattctcacaggt
attctcactggtatccccacatgcattctcgtaggtatactcacgggtaatcccacgggc
attctcacaagcattctctcaggtatccccacaggcattctcacaggtattctcactggt
atccccacatgcattctcataagtattctcacgggtaatcacacaggcattctcacaggc
attctctcaggtattcctacaggcattctcacaggtatccccacaggcattctcacagat
attctcactggtaaccacacgggcattctcacaggcattctctcaggtattcctacaggc
attctcacaggtatccccacaggcattctcactggtattcacacaggtattctcactggc
attcccacaggtatttccacaggtattcctacagatatttccataggtattcccataggt
atttccaaaggtatttctataggctttcccacaagtatccccacaggcattctcacaggt
attctcactggtatccccacatgcattctcataggtattctcactggtaatcacacgggc
attctcacaagcattctctcaggtatccccacaggcattctcactggtattcacacaggt
attctcactggtaatcgcacaggtattctcacaggcattcccacagatatttccacagat
attcctacagctatttccataggtattcccataggtatttccaaaggtattcttacagat
atttccataggtattcccataggtatttccaaaggtatttctgcaggctttcccacaagt
atccgcacaagtattcccacaggtattcttactggtattcacacaggtattctcactggt
attcacacaggcattctctcaagtattcccacaggcatccccacaggtattcttactggt
attcacacagggattctctcaagtattcccacagggattctcaccggtatttatacaggc
attcccacaggtatcccaacaggcattcccacacgcattcccataggcattcccacagat
atttccataggtattcctgtaggtatttccaaaggtatttctataggctttcccacaagt
atccccacaggtattcccacaggtattcttactggtattcacacaggtattcctacagat
atttccataggtattcccataggtatttccaaaggtacttctacaggctttcccacaagt
atccccacaggtattctcactggtatccccacaggctttctcacagatatttccacaggc
attcctacaggtatttccagaggtattcccataggtctttccaaacgtatttctacaggc
atttccataggcattcccaaaggcattctcacaggcatccccacaggtattctcattggt
attcacagaggtattctcatgggttttttcactggtatccccatgggtattcacacaggt
attctcaccggatctccacaggagagctctggctggcatctggcgggtgcccctttggga
caaagcttccagaagaaggaacaggcagcagtctttgctgtactgcagcctctgctggtg
atacccaggcaaacggtctggagtggacctccagcaactccagcagacctgcagcagagg
ggcctgactgttagaaggaaaactaacaagcagaaagaaattgcatcaacatcaacaaaa
aggatgtccacacaaaaaccccaccagaaggtcaccaacatcaaagaccaaagaattaga
aaaagctactttaaatttcatatggaaccaaaaaagagcctgtatagccaagacaacctt
aagcaaaagaacaaagctggaggcatcacgctacctgacttcaaactatattacaaggct
acagtaaccaaaacagcatggtactggtaccaaaacaggtatatagaccaatggaacaga
acagaggccttagaaataatgccacacatctacaaccatctgatctttgacaaacctgac
aaaaacaaacaatggggaaaggattccctatttaataagtggtgttgggaaaactggcta
gccatatgcagaaaactgaaactggaccccttccttacaccttataaaaaaattaactca
agatggattaaagacttcaatgtaagacctaaaaccataaaaacccttgaagaaaaccta
ggcaataccattcaggacataggcattggcaaagactttgtgactaaaacaccaaaagca
attgcaacaaaagccaaaattgacaaatgggatctaattaaagagcttccgcatagcaaa
agaaactatcatcagagtgaacagacaacctacagaatgggagaaaatttctgctatcta
tccatctga

>gi568815576f:34967088_35185690|GENSCAN_predicted_peptide_3|184_aa
MVTPLMSNWGMERNSLGCCEAPKKLSLSFSIEAILKRPARRSDMDRPEGPGEEGPGEAAA
SGSGLEKPPKDQPQEGRKSKRRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLP
EARVQIWFQNQRAKWRKQEKIGNLGAPQQLSEASVALPTNLDVAAVTDLPPTFSNSVSSS
VRYD

>gi568815576f:34967088_35185690|GENSCAN_predicted_CDS_3|555_bp
atggtgactcctttgatgtcaaactggggtatggagagaaatagcttggggtgctgtgag
gccccgaagaagctgagcctgtccttctccattgaggcgatcctaaagaggcctgccagg
aggagtgatatggacagaccagaagggccaggtgaagagggccccggagaagctgcggcc
tcaggctctgggctagaaaagcctccaaaggaccagccccaggaaggaaggaagagcaag
cggagggttcgtaccaccttcaccactgagcagctgcatgagctggagaagatcttccac
tttacccactacccagacgttcacatccgcagccagctggcagccaggatcaacctccca
gaagctcgggtgcagatctggttccagaatcagcgagccaagtggcggaagcaggagaag
attggcaacctgggggctccacagcagctgagtgaagccagtgtggccctgcccacaaat
ctggatgtggctgcagtgaccgatttgccacctactttcagcaactcggtttcctcatct
gtccgatacgactga

>gi568815576f:34967088_35185690|GENSCAN_predicted_peptide_4|93_aa
MGGIATQGEKERTFQGSLSMDGFREGQGAVPTQPVPRVGCQTLASRFKPHSPCQVLLGYP
EDAVKKVTLPSLPSIDLLVTLMRKMKYGEIVLN

>gi568815576f:34967088_35185690|GENSCAN_predicted_CDS_4|282_bp
atgggtggtattgctacacagggagaaaaggagaggactttccagggatccctgtccatg
gatggattcagggaaggacaaggggccgtgcccacccagccagtaccccgggtgggctgt
cagaccctggcctccagatttaagcctcattctccatgccaggtgctactgggttacccc
gaagatgcagtgaagaaagtcacgctgccatccctgccctccatcgacctcctggtgacc
ttgatgaggaaaatgaagtacggagagattgttttgaattaa

>gi568815576f:34967088_35185690|GENSCAN_predicted_peptide_5|93_aa
MWTFWLHIQAPYAPNQLPLGTLWAGSVPTNSGVHLVKNKERKEGSSTWKELLEILKRCSN
FLQACENHQLQYFRPRFLAVSMSLDFGSSSSNL

>gi568815576f:34967088_35185690|GENSCAN_predicted_CDS_5|282_bp
atgtggaccttctggctgcacatccaagctccatatgcccccaaccaacttccccttggt
actctctgggctgggagtgtacccaccaacagtggggtccaccttgtaaagaataaggaa
aggaaagagggctccagcacttggaaggagcttctagagatcctcaagcgttgcagcaac
ttcctgcaggcttgtgagaaccaccagcttcaatacttcaggcccaggttcctggccgtg
tcaatgtccctggattttggcagcagctcctctaacctctga

>gi568815576f:34967088_35185690|GENSCAN_predicted_peptide_6|162_aa
MGTRGEDSLLQPREVSEESCPDDLPELSPQYKLDTESNKVLHAQDISGAKVQRQNGHRLC
SQRSSERIPSQSPPTWTLCLLNNKERSSSPAMEQSWTENDFVELREEGFRRSNFSKLKAE
VRTHRKEAKNLEKRLDKWLTRITSVKNSLNDLMELKTMAGEL

>gi568815576f:34967088_35185690|GENSCAN_predicted_CDS_6|489_bp
atggggacccggggagaagacagccttctacagccaagagaggtctcagaagaaagctgc
cctgatgatcttccagaactaagtccgcagtacaaactagacactgaatctaacaaggtg
ctccatgctcaggacatttctggagccaaggtgcagaggcagaatggacacaggctttgt
agtcaaagatcctcagagaggattccaagtcagtcacctcccacctggaccctctgtctc
ctcaacaacaaggaacgcagctcctcaccagcaatggaacaaagctggacggagaatgac
tttgttgagttgagagaagaaggcttcagacgatcaaacttctccaagctaaaggcggaa
gttcgaacccatcgcaaagaagctaaaaaccttgaaaaaagattagacaaatggctaact
agaataaccagtgtaaagaactccttaaatgacctgatggagctgaaaaccatggcagga
gaactataa

>gi568815576f:34967088_35185690|GENSCAN_predicted_peptide_7|227_aa
MKAEIKMFFETNENKDTTYQNLWDTFKAVYRGKFIALNAHKRKKERSKIDTVTSQLKELE
KQEQTQSKASRRQEITKIKAELKEIDTQKTLQKINESRSWFFEKINKIDRLLARLIKKKR
EKNQIDAIKNDKGDITTNPTEVQTTIREYYKHLYTNKLENLEEMDKFLDTYTLPRLNQKE
VESLNRPITGFEIEAIINSLPTKKSPGPDGFTAKFYQRYRRSWYHSF

>gi568815576f:34967088_35185690|GENSCAN_predicted_CDS_7|684_bp
atgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacataccag
aatctctgggatacatttaaagcagtgtatagagggaaatttatagcactaaatgcccac
aagagaaagaaggaaagatctaaaattgacaccgtaacatcacaattaaaagaactagag
aagcaagagcaaacacagtcaaaagctagcagaaggcaagaaataactaagatcaaagca
gaactgaaggagatagacacacaaaaaacccttcaaaaaatcaatgaatccaggagctgg
ttttttgaaaagatcaacaaaattgatagactgctagcaagactaataaagaagaaaaga
gagaagaatcaaatagacgcaataaaaaatgataaaggggatatcaccaccaatcccaca
gaagtccaaactaccatcagagaatactacaaacacctctacacaaataaactagaaaat
ctagaagaaatggataaattccttgacacatacaccctcccaagactaaaccagaaagaa
gttgaatctctgaatagaccaataacaggctttgaaattgaggcaataattaatagccta
ccaaccaaaaaaagtccaggaccagacggattcacagccaaattctaccagaggtacagg
aggagctggtaccattccttctga

>gi568815576f:34967088_35185690|GENSCAN_predicted_peptide_8|178_aa
MSRKALVILRELDEGPEWKLAVTKLGGFAVGTKTHSSTDSLKMSSGQKRVGYFHSIPRGN
ACAEIAGDKARAVIWNWIHGTWIMEDLNAKLMCLDKILQASGEHNHDSEERNSKRRKVDE
AQESCVLFMAAPYEEDRESPPVIWNHLELPRKCRTTLPAILPLCSVVHFDVPVWMPQP

>gi568815576f:34967088_35185690|GENSCAN_predicted_CDS_8|537_bp
atgtcaagaaaagccttagtcatcctcagagagcttgatgaaggacctgagtggaagtta
gctgtgacaaagcttggaggctttgctgttgggacaaagacacacagtagtacagactct
ttgaagatgtcaagtggccagaagcgagtaggttacttccacagtatacctagaggaaat
gcatgtgcagaaatagcaggagataaggccagagcagtcatttggaactggatccatgga
acatggatcatggaagacctcaatgccaagctgatgtgtttggacaagatcctgcaggca
agtggggagcacaaccatgatagtgaagaaagaaatagtaaaaggaggaaggttgatgag
gcacaagagagctgtgtgttgtttatggcagctccctatgaggaagacagggagtcacct
cctgtcatctggaatcacctggagcttccccgaaagtgccgaaccactctgccagccatt
ctaccattgtgcagcgtggtacacttcgatgtgcccgtgtggatgccccaaccctga