GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:19:25

Sequence gi568815584f:75422683_75646668 : 223986 bp : 46.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   4241   4280   40                              -2.96
 1.01 Init +   5326   5570  245  0  2   32   76   131 0.483   1.51
 1.02 Intr +   5891   5924   34  2  1  131   84    19 0.723   4.03
 1.03 Intr +   9436   9584  149  0  2  109   24   183 0.252  13.03
 1.04 Intr +  13588  13727  140  1  2    5  103    37 0.052  -2.99
 1.05 Intr +  15216  15434  219  1  0  109   59   232 0.337  20.67
 1.06 Intr +  18723  18888  166  1  1   52  113    85 0.505   6.42
 1.07 Intr +  31342  31458  117  1  0   31   68   118 0.351   3.68
 1.08 Intr +  35105  35192   88  2  1   66   60    31 0.109  -1.93
 1.09 Intr +  38744  38848  105  1  0   96   88   183 0.944  19.51
 1.10 Term +  46608  46793  186  2  0   71   47   424 0.820  34.09
 1.11 PlyA +  49996  50001    6                               1.05

 2.00 Prom +  51128  51167   40                              -0.46
 2.01 Init +  67020  67136  117  2  0   83   -7   135 0.114   3.70
 2.02 Intr +  72439  72558  120  0  0   62   94    16 0.063   0.29
 2.03 Intr +  91332  91440  109  2  1   72   15    84 0.186  -0.64
 2.04 Intr +  92467  92735  269  2  2   18   94   132 0.259   4.05
 2.05 Intr + 102402 102506  105  2  0  114  119   114 0.996  17.51
 2.06 Term + 123780 123989  210  2  0   83   49   404 0.898  33.29
 2.07 PlyA + 124291 124296    6                               1.05

 3.06 PlyA - 124305 124300    6                              -6.84
 3.05 Term - 124620 124338  283  2  1   -9   48   257 0.188   6.90
 3.04 Intr - 126221 125929  293  2  2   71   85    50 0.074  -1.07
 3.03 Intr - 128156 127948  209  0  2   53   51    92 0.057   0.80
 3.02 Intr - 136608 136467  142  0  1  -40    4   337 0.364  12.43
 3.01 Init - 139274 139146  129  2  0   78   89    72 0.825   6.45
 3.00 Prom - 141502 141463   40                              -3.96

 4.00 Prom + 143630 143669   40                              -2.26
 4.01 Init + 149375 149470   96  1  0   65   81    38 0.165   0.32
 4.02 Intr + 154992 155118  127  2  1   75   78    92 0.312   7.15
 4.03 Intr + 156241 156959  719  2  2   13   96   718 0.328  56.25
 4.04 Term + 157176 157193   18  2  0   64   42     8 0.276  -7.88
 4.05 PlyA + 158568 158573    6                              -1.95

 5.04 PlyA - 159540 159535    6                               1.05
 5.03 Term - 160424 160230  195  2  0   55   33   168 0.747   5.41
 5.02 Intr - 162065 161932  134  0  2  107   80    71 0.988   8.56
 5.01 Init - 170914 170833   82  1  1   79   92    53 0.879   5.93
 5.00 Prom - 171992 171953   40                              -7.16

 6.02 PlyA - 172212 172207    6                               1.05
 6.01 Sngl - 173524 173204  321  1  0   87   54   248 0.992  17.29
 6.00 Prom - 175764 175725   40                              -2.76

 7.00 Prom + 177810 177849   40                              -5.66
 7.01 Init + 183227 183312   86  1  2   83   83    64 0.087   3.71
 7.02 Intr + 187303 187378   76  1  1   58   46    66 0.010  -1.08
 7.03 Intr + 199397 199538  142  1  1   78   87   134 0.993  12.23
 7.04 Intr + 201930 202070  141  1  0  106   91    70 0.958   9.42
 7.05 Intr + 210947 211014   68  0  2  125  107    32 0.962   7.42
 7.06 Intr + 212228 212331  104  1  2   52  108    87 0.918   6.07
 7.07 Intr + 216670 216780  111  1  0   75   98    60 0.897   5.19
 7.08 Intr + 218273 218378  106  2  1   78   80    93 0.990   7.72
 7.09 Intr + 218500 218611  112  0  1  124  105   114 0.962  16.65

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100063   63  1  0   83   80    45 0.828   4.35
S.002 Term + 105247 105306   60  0  0   82   44    92 0.967   2.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:75422683_75646668|GENSCAN_predicted_peptide_1|482_aa
MQPVPPPATACGRDARRPRRGALAAADAAAAAGLAPRRLPGRDRPGHRAELRGRAAAARS
GHGACSRAPAPGAPPPPAPSAREVLSSGGGEGGSWGQPSEEGLLLLAFTLSLGAFPIILL
LAFWISSTFGSRVTYVIQIPRERPLLQETESPRTMWPSEYINCPTEKYCPMDIRSSLFCQ
IHLSPWEETGWPATPPAMMPGQIPDPSVTTGSLPGLGPLTGLPSSALTVEELKYADIRNL
GAMIAPLHFLEVKLGKRPQPVKIPLFKPYLLSIYYVLSTAPGTGNRATDKAVKALHLSAP
YIAVTASKSKQINTRYISYVFENAYEKSEFKITSGLLFVTVEMPRHLQTGPEKHGNGQCA
SREGRLPALLAYYKQREEATPAEKAPLDEEEERRKRRREKNKVAAARCRNKKKERTEFLQ
RESERLELMNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLLEQLE
KK

>gi568815584f:75422683_75646668|GENSCAN_predicted_CDS_1|1449_bp
atgcaacccgtcccgccgcccgccacagcctgcgggagggacgctcggcggccgcgacgg
ggggcgctggcggcggcggacgctgcagcggcggcggggctggcgccgcggcggctcccg
ggccgggacaggcctgggcaccgggcggagctccgcggccgggcggcagcggcgcggagc
gggcacggcgcctgcagccgggccccggccccgggggcgccgcctccccccgcaccttct
gcacgggaggtgctctcctcgggcggcggggaaggcgggagctggggacagccatctgaa
gagggccttttgctgctcgccttcactctcagtcttggggccttccccatcatcttgctt
ctcgccttctggatctcctcgacttttggaagccgcgtgacctacgtcattcagattcca
agagagaggccactcctgcaggagacagagagcccaagaaccatgtggccatctgagtac
attaactgcccaacggagaagtattgtccgatggacatcagatcttccctcttctgccaa
atacatctctctccatgggaagagacaggctggcctgccactcctcctgctatgatgcct
gggcagatcccggacccttcggtgaccacaggctccctgccagggcttggccccctgacc
gggctccccagctcggccctgactgtggaggagctgaaatacgctgacatccgcaacctc
ggggccatgattgcacccttgcacttcctggaggtgaaactgggcaagaggccccagccc
gtgaaaatccctttgttcaagccatatttgttaagcatctactatgtgctgagcactgca
ccaggcactgggaacagagctacagataaagcagtcaaagccttacatctctcggcaccg
tatattgcagtgacggcatccaaaagtaagcaaattaatacacgatatataagctatgtt
tttgaaaacgcttatgaaaagtcagaattcaaaatcacatctgggctgctgtttgtcaca
gtggaaatgccgcgccacctgcagacggggcctgagaaacacggaaatggccagtgtgct
tctagggaaggcaggctcccagctttgctggcctactacaaacagagagaagaggccacc
ccggcagagaaagctcccctagatgaggaagaggagcgaaggaaaaggcgccgggagaag
aacaaagtcgcagcagcccgatgccggaacaagaagaaggagcgcacggagtttctgcag
cgggaatccgagcggctggaactcatgaacgcagagctgaagacccagattgaggagctg
aagcaggagcggcagcagctcatcctgatgctgaaccgacaccgccccacctgcatcgtc
cggaccgacagtgtcaagacccccgagtcagaaggcaacccactgctcgagcagctcgag
aagaagtga

>gi568815584f:75422683_75646668|GENSCAN_predicted_peptide_2|309_aa
MQRMVFLTESEEAVCSVPLQNAKKSWLVLEPSTPEHLKTDMAILMMAEAAINQVHPSCKF
MESSKQLHDTYTGNIFIFQVQEEEALQEAALMPTPAAASGWLDVLSAWPYPQVEVEGKQP
TVAPKDPDRQRPRAAAEGTGSHFLHFTSSCLACIDDLNWGVNPKRSSASSRRMMRTDSGL
VNLRERESVGANEAKGARLLSAPRQDSSDDVRRVQRREKNRIAAQKSRQRQTQKADTLHL
ESEDLEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAASTPSPPEVVYSAHAFHQP
HVSSPRFQP

>gi568815584f:75422683_75646668|GENSCAN_predicted_CDS_2|930_bp
atgcaaaggatggtgtttctcacggagtcagaggaggccgtctgctccgtgcccttacag
aatgccaagaagtcatggctggtgctggagccctcaaccccagaacaccttaagactgat
atggccatattaatgatggcagaggctgccattaaccaagtgcacccaagctgtaaattc
atggaatcctccaaacagctccatgatacatatactggtaatatcttcatttttcaggtg
caggaagaggaggccctgcaggaagcagctctgatgcccactccggctgctgccagtggc
tggctggatgtgctatcagcatggccatacccacaggttgaagtagagggaaagcaaccc
actgtggccccgaaagacccagaccgccagcggccccgggcagccgccgagggcaccggc
tcacacttcctgcatttcacaagctcttgcttggcatgcattgatgacttgaactggggg
gttaacccaaaaagatcaagtgcgagctcaaggcggatgatgagaacagattcggggctg
gttaacctcagagagcgggagtccgttggtgctaatgaggccaagggagcccggctcctt
tctgcccccaggcaggactcatctgatgatgtgagaagagttcagaggagggagaaaaat
cgtattgccgcccagaagagccgacagaggcagacacagaaggccgacaccctgcacctg
gagagcgaagacctggagaaacagaacgcggctctacgcaaggagatcaagcagctcaca
gaggaactgaagtacttcacgtcggtgctgaacagccacgagcccctgtgctcggtgctg
gccgccagcacgccctcgccccccgaggtggtgtacagcgcccacgcattccaccaacct
catgtcagctccccgcgcttccagccctga

>gi568815584f:75422683_75646668|GENSCAN_predicted_peptide_3|351_aa
MEYYAAIKRNKIMSFAATWMELETITLSELTQKWKNKYCIFSLKEKEEEEEEKGEEEEEK
GEEEEEEKGEEEEDEEEEEEKKEKEKKWILGAEASSLDTSSRVWTRPLVCASLDPRDGSC
GGECGRNLVFQAGMSAGMNWRLLWYRKNQGRARKRQAAVRRGGKELDRALATKIQVLKEI
KKAPPHDTSAQSTWRLCTERGACFATFRWETKGYNARFCAGRNASTQGTSSGLSSQALNY
GAQPSVHILGSHGHQLLCLSQDLRNSVKKKEEEEEKGEKRRRRRKEEEEEEKEKEKEKET
PREGIESFPSTSINHGKEELLVESLELFEGTRVQKTKKVPTSQNLECQGTG

>gi568815584f:75422683_75646668|GENSCAN_predicted_CDS_3|1056_bp
atggaatactatgctgccataaaaaggaacaagatcatgtcctttgcagcaacatggatg
gagctggagaccattaccctgagcgaactaacacagaaatggaaaaacaaatactgcata
ttctcacttaaggagaaagaggaggaggaggaggagaaaggggaggaggaggaggagaaa
ggggaggaggaggaggaggagaaaggggaggaggaggaggacgaagaggaggaggaggag
aagaaggagaaggagaagaaatggattctgggagctgaagcctcttccctggatacttct
tcccgagtgtggaccagaccactggtatgtgcatctctggacccaagggatgggtcctgt
gggggtgaatgtggacggaatttggtcttccaggctggcatgtccgccggcatgaactgg
aggctgctgtggtacaggaagaaccaggggagggcaagaaagcggcaagctgcagtccgg
aggggtgggaaagagctagacagagcgttagctaccaaaatccaggttctgaaggaaatt
aagaaagctcctcctcatgacacatctgcccagtccacatggaggctctgcactgaaagg
ggagcctgttttgccacgtttcgttgggagaccaaaggttacaatgcaagattctgtgct
gggagaaatgccagcactcagggaacgtcttctgggctgtcttcccaggctctgaattac
ggggctcagcccagtgtccacatcctaggctcccatgggcaccagcttctctgcctgagc
caagatctgagaaattctgtcaagaagaaggaggaggaggaggagaagggggagaagagg
aggaggaggagaaaggaggaggaggaggaggagaaggagaaggagaaggagaaggagaca
cctagagaaggaattgaaagcttcccaagtacatcaataaaccatggaaaagaggagctg
ttagtggagtccctagagctctttgagggtactagagtccaaaaaacaaagaaggtccca
acatcgcagaatttagagtgtcaagggacagggtga

>gi568815584f:75422683_75646668|GENSCAN_predicted_peptide_4|319_aa
MGEGFLEEGTLALHCEARLWGAAGGSTCLEQKMKKLKRREVEFLGLQWHLIVAKLVFELR
ENLGSLPGSLAKDRDCRSPHHFSRIPEETVAMVNEGPNQEESDDTPVPESALQADPSVSV
HPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSSGPEDLSVIKVSRRRWAVVL
VFSCYSMCNSFQWIQYGSINNIFMHFYGVSAFAIDWLSMCYMLTYIPLLLPVAWLLEKFG
LRTIALTGSALNCLGAWVKLGSLKPHLFPVTVVGQLICSVAQVFILGMPSRIASVWFGAN
EVSTACSVAVFGNQPKACF

>gi568815584f:75422683_75646668|GENSCAN_predicted_CDS_4|960_bp
atgggggaaggcttcctggaggaggggacgcttgccctgcattgtgaagcacgcttatgg
ggagctgcaggtggctccacctgtctggagcaaaagatgaagaaactgaagcgcagagag
gtggagttccttggtctacagtggcacctcattgtagctaagctggtgtttgaactcagg
gagaatttgggctccttaccaggatccctcgccaaggacagagactgccggagtcctcac
cacttctccaggattccagaggagactgtggcgatggtgaatgaaggtcccaaccaggaa
gagagcgatgacacccctgtgccggagtccgcactccaagcggaccccagcgtctcggtc
catcccagcgtctcggtccatcccagcgtctccatcaaccccagcgtctctgtccacccc
agcagttcggcccaccccagtgccttagcccaacccagtggcttggctcaccccagtagc
tcgggccctgaggacctcagcgtgatcaaggtgagcaggcgccgttgggccgtggtcctg
gtgtttagctgctactccatgtgcaactcctttcagtggatccagtacggctccatcaat
aacatcttcatgcacttctacggtgtcagtgcctttgccattgactggctgtccatgtgc
tacatgctgacttacatccctctgctcctgccagtggcttggctgctggagaagttcggc
ctgcgcaccattgctctcactggctcggctctcaactgcctgggggcctgggtgaagctg
ggcagcctgaagccgcatctctttccggtcaccgtggtgggccagctcatctgctctgtg
gcccaggttttcatcctgggcatgccctcccgcatcgcttccgtctggttcggggctaat
gaggtttcaacagcctgctccgtggctgtctttggcaatcagccaaaagcatgcttctag

>gi568815584f:75422683_75646668|GENSCAN_predicted_peptide_5|136_aa
MGEDPPPADLMEADSHSRKTRLVPAEMDERERVFSLAQSHADNCRLHEPDLQEALEQFPK
RTPSGTFRQIPQPLFAFTWTDPDAHQPQQLIWAVLPQGFKDSAHYFSQAQTSSSSVTYLG
IILNENNVLSLLIVSS

>gi568815584f:75422683_75646668|GENSCAN_predicted_CDS_5|411_bp
atgggggaggatcctccaccagctgatctcatggaagcagattctcactctcgcaagact
agattagttcctgcagaaatggatgaacgggaaagagttttttctctagcccaatctcac
gctgataactgccggcttcacgagccagacctccaggaagcattagagcagttccccaag
aggacccccagtggaactttcaggcagattccccagcctctcttcgctttcacttggact
gaccctgatgcccatcagcctcagcaacttatctgggctgtactgccacaaggcttcaag
gacagcgcccattacttcagtcaagcccaaacttcgtcttcatctgttacctatcttggc
ataattcttaatgaaaacaatgtgctctccctgctgatcgtgtccagctaa

>gi568815584f:75422683_75646668|GENSCAN_predicted_peptide_6|106_aa
MNDTVTIHTRKFMINRRLQRKQTVIDILHPGKATVPKTEIWEKLAKMYKTTLDVIFVFAF
KTHFGGGKTTGFGMIYDPLDYAKKNEPKHRLARHGLYEKKKTSRKQ

>gi568815584f:75422683_75646668|GENSCAN_predicted_CDS_6|321_bp
atgaacgacacagtaactatccacactagaaagttcatgatcaaccgacgacttcagagg
aaacaaacagtcattgatatccttcaccctgggaaggcaacagtgcctaagacagaaatt
tgggaaaaactagccaaaatgtacaagaccacactggatgtcatctttgtatttgcattc
aaaactcattttggtggtggcaagacaaccggctttggcatgatttatgatcccctggat
tatgcaaagaaaaatgaacccaaacatagacttgcaagacatggcctgtatgagaagaaa
aagacctcaagaaagcaatga

>gi568815584f:75422683_75646668|GENSCAN_predicted_peptide_7|316_aa
MAGSPLAALEVAVCMQVYLLCSSTGKHRRIGGQSVPKHLNGALHIAYFKCENFGLGIAIG
FLVPPVLVPNIEDRDELAYHISIMFYIIGGVATLLLILVIIVFKEKPKYPPSRAQSLSYA
LTSPDASYLGSIARLFKNLNFVLLVITYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRI
GLTIVIAGMLGAVISGIWLDRSKTYKETTLVVYIMTLVGMVVYTFTLNLGHLWVVFITAG
TMGFFMTGYLPLGFEFAVELTYPESEGISSGLLNISAQVFGIIFTISQGQIIDNYGTKPG
NIFLCVFLTLGAALTX

>gi568815584f:75422683_75646668|GENSCAN_predicted_CDS_7|948_bp
atggctgggtctcctttggcggctctagaggtagctgtctgtatgcaagtctatttgctg
tgttcatctactggaaaacataggagaattggtgggcaatcagtgccaaagcatttgaat
ggcgctttgcacatcgcctacttcaaatgtgaaaactttggacttggaattgcgattggg
ttcttggtccctcctgttttggtacccaacattgaagaccgggacgagcttgcctaccac
atcagcatcatgttctatataataggaggtgtggccactctcctcctcatccttgtcatc
attgtgttcaaggagaaacctaaatatccccccagcagggcccaatccctgagctatgcc
ttgacctctcctgatgcctcatacttaggttccatcgcccggctcttcaaaaatctcaac
tttgtgctgcttgtcatcacctatggtctgaatgctggtgctttttatgccttgtccact
cttctgaatcgcatggtgatctggcactacccgggggaagaagtgaatgctggaagaatt
ggcctgacgatcgtcattgcaggaatgcttggggctgtgatctcaggaatctggctggat
aggtccaaaacctacaaagagacaaccctggtagtctatatcatgacactggtgggcatg
gtggtgtacacgtttaccttgaacctgggacacctgtgggtagtgttcatcactgctggc
acaatgggcttctttatgactggctatctcccactgggatttgagtttgctgtggagctc
acgtacccagaatcagaaggcatctcctccggcctcctcaacatatctgcacaggtattt
gggatcatctttaccatctcccagggccagattattgacaactatggaaccaagcctggg
aacatcttcctgtgtgtgttccttactcttggagcagccctcactgnn