GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:18:11

Sequence gi568815587f:20264238_20483202 : 218965 bp : 38.26% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9565   9767  203  0  2   63   81    78 0.762   3.00
 1.02 Term +  11858  12119  262  2  1  115   31   178 0.856   8.81
 1.03 PlyA +  12688  12693    6                               1.05

 2.00 Prom +  28677  28716   40                              -5.55
 2.01 Init +  29418  29462   45  2  0   47   81    66 0.125   2.55
 2.02 Intr +  40438  40479   42  0  0   83   96    22 0.038   0.02
 2.03 Intr +  50738  50872  135  1  0   85   98   119 0.682  12.44
 2.04 Intr +  62355  62453   99  2  0  108   98    27 0.411   5.09
 2.05 Intr +  68100  68235  136  2  1   97   40    71 0.484   2.42
 2.06 Intr +  79564  79702  139  2  1   39   72   128 0.004   4.90
 2.07 Intr +  80049  80197  149  0  2   16   41   108 0.025  -2.14
 2.08 Intr +  92236  92423  188  2  2   46   89   168 0.270  11.19
 2.09 Term +  94297  94320   24  0  0  111   34     1 0.148  -5.75
 2.10 PlyA +  94662  94667    6                               1.05

 3.00 Prom +  97146  97185   40                              -6.65
 3.01 Init +  99575  99675  101  1  2   53   91   297 0.999  24.28
 3.02 Intr + 100000 100195  196  1  1   56   52   226 0.998  14.30
 3.03 Intr + 102937 103044  108  0  0   61   91    89 0.984   6.06
 3.04 Intr + 105751 105925  175  0  1   83   -3   202 0.925   9.19
 3.05 Intr + 112078 112151   74  2  2  139   58     6 0.828   0.91
 3.06 Intr + 112343 112480  138  1  0   99   76    79 0.985   7.54
 3.07 Intr + 117941 118002   62  1  2   83  106    57 0.973   3.61
 3.08 Intr + 118743 118881  139  0  1   95   69    40 0.320   2.35
 3.09 Intr + 122950 123101  152  0  2   77  -43   182 0.306   2.04
 3.10 Intr + 123228 123517  290  0  2   58   -3   198 0.466   3.67
 3.11 Intr + 123782 123917  136  0  1   49   79   183 0.846  12.21
 3.12 Intr + 124228 124407  180  1  0   19   67   122 0.680   1.26
 3.13 Intr + 125507 125589   83  2  2   68  101    51 0.924   2.76
 3.14 Intr + 131566 131703  138  2  0   93   66   151 0.677  12.91
 3.15 Intr + 133372 133484  113  2  2   34   72   105 0.661   2.68
 3.16 Intr + 138682 138747   66  0  0  102  115    62 0.993   8.48
 3.17 Intr + 143674 143795  122  0  2   71   83   121 0.979   8.27
 3.18 Intr + 162529 162628  100  1  1   57  101   107 0.594   8.09
 3.19 Term + 165244 165357  114  0  0   60   39    86 0.429  -1.51
 3.20 PlyA + 165936 165941    6                               1.05

 4.05 PlyA - 166201 166196    6                               1.05
 4.04 Term - 172076 171928  149  0  2    6   43   145 0.738  -1.12
 4.03 Intr - 174004 173846  159  2  0   86   92   137 0.972  12.94
 4.02 Intr - 174663 174516  148  0  1   56   99    82 0.858   4.99
 4.01 Init - 174970 174830  141  1  0   56   84    67 0.230   3.28
 4.00 Prom - 176936 176897   40                              -6.05

 5.00 Prom + 182520 182559   40                              -3.95
 5.01 Init + 183120 183128    9  2  0   87  117    13 0.888   3.90
 5.02 Intr + 187893 187971   79  2  1  124  100    15 0.980   4.51
 5.03 Intr + 197743 197930  188  2  2   60  100   207 0.957  17.59
 5.04 Intr + 200223 200309   87  2  0   54  115    36 0.671   2.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  79419  79781  363  2  0   51   54   220 0.833  10.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:20264238_20483202|GENSCAN_predicted_peptide_1|154_aa
MPPATKINKPIRRAESRPEPLGVGPHLQKKAQRFFLGTDGPFFLSCFRKRLGCQALIQNR
SAFRSILCFGLSDLLWLGSISGAHSWNVRAASKSWTLSLRRVLEDPLPTLTPSHLRGVIV
PMAITPSPLECYLTDGGPSLWERRDHDLSEHMVS

>gi568815587f:20264238_20483202|GENSCAN_predicted_CDS_1|465_bp
atgcctcctgcaaccaaaataaataaacccataagaagagcggaaagcagaccagagcct
ctgggagttggccctcacctgcagaagaaagcacagagattcttcctggggactgatggt
ccgttttttctttcttgttttcgaaagaggcttggctgtcaggctttgattcagaacagg
agtgcattcagaagcatcctctgctttggcctctcagacttgctgtggcttgggagcata
tctggggcccacagctggaatgtccgggctgcttccaagagctggaccctcagtctcagg
cgggttctggaggacccactcccaaccctaacacccagtcaccttcgtggggtgatcgtc
ccaatggccatcactccctcaccactggagtgttacctcacagatggaggacctagcctg
tgggaaagaagagaccatgacttatcggaacatatggtttcttaa

>gi568815587f:20264238_20483202|GENSCAN_predicted_peptide_2|318_aa
MQWYAPVVTATQTAKTWISGVLKATGYPRISGDIKESDVLVLHDEMCQRLKDLHNSVNQC
FPIDQCMVAQNQAQTPELKPTERELRKQHSLENKNFPRMSLPQMAIKVIKTQKSAFNLAF
QHDVVEQKAIALRLEHLIQFLAPTLAWYGLYAARVQNWTEDEMGELIEVGFRRWVITNFA
ELKEHVLTQCEEAKNLDKSKTGQYSNSGNTENTTQILHEKINPKTHNQQILQNRNEGKNV
KGSQRERPETEDTDTRREDHVKTEAEMGVLQPQPEERLEPSEVGRGKGAFSPRTCRGNMV
LLTLQFQTSERAGPYLPL

>gi568815587f:20264238_20483202|GENSCAN_predicted_CDS_2|957_bp
atgcagtggtatgcacctgtggtcacagcgactcagacagctaagacctggatctcagga
gttctcaaagctacaggctacccaaggattagtggagatattaaagaaagtgatgttttg
gtgttgcatgatgaaatgtgtcaacgtttgaaagatctgcataactcagtgaaccagtgt
tttccaattgaccagtgcatggtggcacaaaatcaggcacagacaccagaactcaaacca
acagaaagagaactgcgaaagcagcatagccttgagaataagaatttccccagaatgtcc
ctcccacaaatggccataaaggtcataaaaacccaaaaatctgcctttaatttggctttt
caacatgacgtggtagagcagaaagcaattgctcttaggctagaacacctgattcaattt
ctggctccaacacttgcctggtatggcctttatgcagcaagggtgcagaactggacagag
gatgagatgggtgaattgatagaagtaggcttcagaaggtgggtaataacaaactttgct
gagctaaaggagcatgttctaacccaatgcgaagaagctaagaaccttgataaaagcaag
acaggccaatattcaaattcaggaaataccgagaacaccactcagatactccatgagaag
atcaatcccaagacacataatcagcagattctccaaaatcgaaatgaaggaaaaaatgtt
aagggcagccagagagaaaggccagagacagaagacacagacaccagaagagaagaccac
gtgaagacagaggcagagatgggagttttacagccacaacccgaggaacgcctggagcca
tcagaagtgggaagagggaagggagcattctcccctagaacctgcagagggaacatggtc
ctgctgacacttcaatttcagacttctgagagagctggtccctacctgcctctctag

>gi568815587f:20264238_20483202|GENSCAN_predicted_peptide_3|828_aa
MAGPAALSAAAAAALAAALLLLRREDPGPGAGPSMAETEALSKLREDFRMQNKSVFILGA
SGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHD
VGFCCLGTTRGKAGANTVVQSMHWLPDLALIQIYCISISEFGSLESVFLAGSLGDPDAVN
PVLLVEPTFKRHWDLFGVCVSMSLSLFPYCSPVLLLKLEGFVRVDRDYVLKSAELAKAGG
CKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWL
VRKFFGSLPDSWASGHSVPVVTVVRAMLNNVDLGAQKPAEPPAFGLLRHQRASWADRPSA
NRSSQEKGAHRGQDANPKTAATAHCANPAAGGGGAPALAPPPPHVTRTAPRGRKRLRASA
RASAFPAVCEVSGARVPPRVRACARARSWSRRPLRALVAQPGPRPQTRRALGAPQPCARG
RGAVENEEDLPELSDSGDEAAWEDEDDADLPHGKQQTPCLFCNSQGWGLRIFCFYEDKIG
SNSEVTNELLLTSNIFGSHPELDNPYGAFRLYHANSLTSTELLRLFTSAEETFSHCKSEH
QFNIDSMVHKHDVEDLYEPVSVPFSYPNGLSENTSVVEKLKHMEARALSAEAALARAHVR
TCSSSTSVIADLQEDEDGVYFSSYGHYGIHEEMLKDKIRTESYRDFIYQNPHIFKDKVVL
DVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPV
EKVDVIISEWMSVGQVRPLSSSGRQSLESLEPEMKGASCLEAKVLRNQ

>gi568815587f:20264238_20483202|GENSCAN_predicted_CDS_3|2487_bp
atggccgggcctgcggcgctgagcgcggcggcggcggctgctctggcggccgccctgctc
ctgctgcgtcgtgaggacccggggccgggggctggccccagcatggccgaaacagaagcc
ctgtcgaagcttcgggaagacttcaggatgcagaataaatccgtctttattttgggcgcc
agcggagaaaccggcagagtgctcttaaaggaaatcctggagcagggcctgttttccaaa
gtcacgctcattggccggaggaagctcaccttcgacgaggaagcttataaaaatgtgaat
caagaagtggtggactttgaaaagttggatgactacgcctctgcctttcaaggtcatgat
gttggattctgttgcctgggtaccaccagagggaaagctggggcgaacacagttgttcag
tcaatgcactggctccctgacttggccctgatccagatctactgcatcagcatctctgaa
tttggaagcttggaatctgtatttttagcaggctccttgggagatcctgatgcagtcaac
cctgtccttcttgttgaacctactttcaagaggcattgggatttgtttggtgtctgtgtt
tcaatgtcattgtccttgtttccttattgcagtccagtcttgctgctaaagctggaggga
tttgttcgtgttgaccgagattatgtgctgaagtctgcagagctggcaaaagctggaggg
tgcaaacatttcaacttgctatcctctaaaggagctgataaatcaagcaattttttatat
ctacaagttaagggagaagtagaagccaaggttgaagaattaaaatttgatcgttactct
gtatttaggcctggagttctgttatgtgataggcaagaatctcgcccaggtgaatggctg
gttagaaagttctttggctccttaccagactcttgggccagtgggcattctgtgcctgtg
gtgaccgtggttagagcaatgctgaacaatgtggacctgggagcccagaaaccagccgag
cctccagcgtttggcctcctccgccaccagagggcgtcatgggccgatcgcccctccgct
aaccgctcatcccaggaaaaaggggcgcacagaggacaggatgccaaccccaaaaccgca
gcgaccgcgcactgcgccaaccctgcggcaggaggaggcggagcccccgctctcgccccg
cccccacctcacgtgacccgcacggcgcctcgaggccggaagcgattgcgagccagcgcg
cgcgcttcggcgttcccggcggtctgcgaagtttccggagcccgggtcccgccgcgggtt
cgcgcttgtgctcgcgctcgttcctggagtcggcggccgctgcgcgcgctcgttgcccaa
cccggtccccgcccccagacacgccgggctctcggggcaccacagccatgtgctcgcggc
cggggcgctgtggagaatgaggaggacctgccagaactgtcggacagcggggacgaggcc
gcctgggaggatgaggacgatgcagatctcccccacggcaagcagcagaccccctgcctg
ttctgtaacagtcagggatggggtctaagaatattctgtttttatgaggacaagatcgga
agtaacagtgaagttactaacgagttactactaacgagtaacatatttggcagccaccct
gaactagataatccctacggagccttccggctttaccatgctaattctttgaccagtaca
gagcttctcaggttattcacatctgctgaagaaacattttcacactgtaagtctgagcat
cagtttaatattgacagcatggttcataaacatgatgtagaagatctttatgaaccggtg
tcagtacccttctcataccccaatggactcagtgaaaatacatctgttgttgaaaaattg
aaacatatggaagccagggcactgtctgctgaagccgcattggccagagcacatgtcaga
acctgctcgtcatctactagtgtcattgcggacctccaggaggatgaggatggtgtttat
ttcagctcatacgggcattatgggatacatgaagaaatgctaaaggacaaaatacgaaca
gaaagctaccgagatttcatataccaaaatccacatatcttcaaagacaaggtagttttg
gatgttgggtgtggaactggaattctctctatgtttgctgctaaagctggggcgaagaag
gttcttggagttgatcaatctgaaatactttaccaggcaatggatattataagactaaat
aaacttgaagatactattacactaattaaaggaaagattgaagaagttcatcttcctgta
gaaaaagtagatgttatcatatctgagtggatgagcgttggtcaggtaagacctctctct
tcatcaggaaggcagtcactggagtcactggagcctgagatgaaaggagccagttgtttg
gaagccaaggttcttcgaaaccagtaa

>gi568815587f:20264238_20483202|GENSCAN_predicted_peptide_4|198_aa
MPAEGAAWGPNSCALPRENDTLSCPQCLCGYCHLGIETMAEVYLASGLELQQYAASWEKS
TGATQSSNTPLPSGLKQCPASQEMVPWLPRETTTPFGSGQCCGLSKTTVTTEPSGSELLE
GASIVTDPSSCGKLTSNPATEGESAPKDPARAIRQEKEIKDIQIGKKGDKLFLFEDDMIL
YRKSKNLLELTNTFNKAE

>gi568815587f:20264238_20483202|GENSCAN_predicted_CDS_4|597_bp
atgccagctgaaggagctgcctggggtccaaatagctgtgctctcccaagggaaaatgac
actctgtcctgcccccagtgcctgtgtggctactgccatcttggaattgaaactatggct
gaagtgtaccttgcttcagggctggagctgcagcagtatgctgcctcctgggaaaagagt
actggggccactcagagcagtaacacccctctgccatcagggttgaagcagtgccctgca
tcccaggaaatggtgccttggctgcccagagaaaccacgaccccatttgggtcaggccag
tgctgtggcttgagtaaaaccacagttacaactgagccctctggttccgagctgctggag
ggtgcctccattgtcacagatcctagttcttgtgggaaacttacatccaaccctgccaca
gagggtgaatctgcacccaaagacccagccagagcaatcaggcaagagaaagaaataaag
gacatccaaattggaaagaagggagacaaattgttcctgtttgaagacgacatgatctta
tacagaaaatctaaaaacctcttagagctgacaaacacattcaataaagctgaatga

>gi568815587f:20264238_20483202|GENSCAN_predicted_peptide_5|121_aa
MVPGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTISLVAVSDVNKHADRIAFWDDVYG
FKMSCMKKAVIPEAVVEVLDPKTLISEPCGIKHIDCHTTSISDLEFSSDFTLKITRTSMC
T

>gi568815587f:20264238_20483202|GENSCAN_predicted_CDS_5|363_bp
atggtgccgggctattttcttctgtttgagtctatgttagattctgtcctttatgcaaag
aacaaatacttggcaaaaggaggctcggtctaccctgacatttgcactatcagccttgta
gcagtgagtgatgtgaataaacatgctgatagaattgctttttgggatgatgtctatggc
ttcaagatgtcctgcatgaagaaagcagttattccagaagctgttgtggaagttttagat
ccgaagactcttatttcagaaccttgtggtattaagcatatagattgccatacgacgtct
atctcagatttggaattttcatcagattttaccctgaaaatcacaaggacatccatgtgc
acg