GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:17:20

Sequence gi568815590r:73846633_74056055 : 209423 bp : 41.81% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   2169   2164    6                               1.05
 1.02 Term -  32780  32457  324  2  0   15   43   409 0.142  22.88
 1.01 Init -  46427  46365   63  2  0   77   62    53 0.132   2.82
 1.00 Prom -  48051  48012   40                              -8.05

 2.00 Prom +  48157  48196   40                              -6.75
 2.01 Init +  50433  50591  159  2  0   67   95    56 0.230   4.07
 2.02 Intr +  60158  60265  108  1  0  102   52    47 0.421   2.06
 2.03 Intr +  61511  61689  179  1  2   91   44    83 0.438   2.00
 2.04 Intr +  62682  62766   85  0  1   54   68   113 0.222   4.80
 2.05 Intr +  63716  64028  313  1  1   57   69   158 0.614   5.63
 2.06 Intr +  64493  65119  627  0  0   55   48   355 0.545  19.45
 2.07 Term +  66262  66899  638  2  2   44   43   193 0.226   3.82
 2.08 PlyA +  67187  67192    6                               1.05

 3.04 PlyA -  67258  67253    6                               1.05
 3.03 Term -  68097  67948  150  0  0   40   36   136 0.633   0.53
 3.02 Intr -  68504  68253  252  2  0   19   41   198 0.067   4.91
 3.01 Init -  86097  85960  138  0  0   47   84   137 0.413   9.39
 3.00 Prom -  87443  87404   40                              -5.85

 4.00 Prom +  91518  91557   40                              -5.55
 4.01 Sngl +  92912  93154  243  1  0  100   45   166 0.969   8.33
 4.02 PlyA +  95296  95301    6                               1.05

 5.04 PlyA -  96210  96205    6                               1.05
 5.03 Term - 100188  99998  191  1  2  108   36   132 0.997   6.63
 5.02 Intr - 109422 109279  144  1  0   79  115   108 0.947  11.93
 5.01 Init - 113136 113133    4  0  1   68   94     0 0.548  -1.19
 5.00 Prom - 116161 116122   40                              -7.95

 6.00 Prom + 117601 117640   40                              -6.85
 6.01 Init + 118299 118326   28  2  1   68   86    21 0.392  -0.28
 6.02 Intr + 122878 122997  120  2  0   65   98   110 0.964   9.25
 6.03 Intr + 124937 125018   82  0  1   49   92    81 0.914   2.38
 6.04 Intr + 125433 125615  183  0  0   73   81   193 0.914  15.08
 6.05 Intr + 129576 129859  284  0  2   31   91   184 0.025   9.14
 6.06 Intr + 132143 132229   87  0  0   26  111    52 0.331   0.32
 6.07 Term + 134523 134989  467  1  2  110   52   280 0.975  20.79
 6.08 PlyA + 135042 135047    6                               1.05

 7.00 Prom + 135338 135377   40                              -9.55
 7.01 Init + 135493 135594  102  0  0  110   93    86 0.910  11.59
 7.02 Term + 136683 136703   21  2  0  132   54     7 0.631  -0.97
 7.03 PlyA + 137291 137296    6                               1.05

 8.00 Prom + 137650 137689   40                              -8.05
 8.01 Sngl + 137861 138172  312  1  0  102   48   232 0.588  16.28
 8.02 PlyA + 138698 138703    6                               1.05

 9.00 Prom + 139720 139759   40                              -3.55
 9.01 Init + 146033 146047   15  1  0  101   68    36 0.058   1.60
 9.02 Intr + 161865 162042  178  2  1   18   68   142 0.121   3.77
 9.03 Intr + 163369 163497  129  2  0   72  107    69 0.209   6.95
 9.04 Term + 170267 170763  497  0  2   23   43   397 0.016  22.44
 9.05 PlyA + 171190 171195    6                               1.05

10.00 Prom + 171428 171467   40                              -4.75
10.01 Sngl + 171839 172408  570  1  0   49   48   224 0.766  10.40
10.02 PlyA + 172468 172473    6                              -0.45

11.05 PlyA - 172512 172507    6                              -0.45
11.04 Term - 173123 173011  113  0  2   24   49   124 0.421  -0.16
11.03 Intr - 176602 176488  115  1  1   62   98   109 0.611   8.40
11.02 Intr - 180990 180922   69  0  0   60   98    66 0.628   3.26
11.01 Init - 184554 184351  204  0  0   50   80   176 0.255  11.90

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  32735  32457  279  2  0    9   43   366 0.826  19.38
S.002 Sngl + 170308 170763  456  0  0   88   43   424 0.952  33.83


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:73846633_74056055|GENSCAN_predicted_peptide_1|128_aa
MELIKANQIFVARTIPGAAELCRSALKSSSRCTRKPMSLFPKLRIREAFQVCKYQKAAAH
EVLWGPKALRVGLEVWKTHPKGKICEPHNCGWKRNRKKTARNRTSSAFRGTHEENNRSRV
KTGAVSPQ

>gi568815590r:73846633_74056055|GENSCAN_predicted_CDS_1|387_bp
atggagctgattaaagccaatcagatctttgtagctagaactatccctggggctgctgag
ctgtgtcgttctgctcttaaatcctcatcccgttgtacaaggaaacctatgtctctcttc
cccaaattaagaatacgagaagccttccaggtctgcaaataccagaaagcagctgcgcat
gaagttttatggggccccaaggctctgagagtgggcttggaggtatggaaaacacatccc
aagggaaaaatctgtgaaccgcacaactgtggttggaaacgaaataggaaaaaaactgcg
cggaaccggacgtcatcagcatttcgcggtacacacgaagaaaacaaccgtagtcgggtc
aaaactggagccgtgtctcctcagtaa

>gi568815590r:73846633_74056055|GENSCAN_predicted_peptide_2|702_aa
MGIRELPNFHPYAGKMAHPNSTGTKAPVLWAIPDLAIWLFICILCNKLVNIIKAELRVNR
EESHSALGSQEEVGCPCSPEQSSQSYVTQKETSKEISKGPQKPLGYWLCALQAVGGGEFC
PTRVHVPFSLSDLKQIKVDLGKFSDDPDSLLSVNLLTRTAVLTVRYHLRNPGTVCNQTLK
QLRGFLGSTGFCQLWIPGYNEMARPLYTLIKETQRANTHLGEWEPEAETAFKTLNQAPVQ
TPALSFPTGKNFSLYITERAGIALGVLTQTSGTTPQPVACLRTYVQLAELVVLTRALELG
KKKRINVYTDSKYAYLILHAHAAIWKEREFVTSGGIPIKYHKDIMELLHAVQKPKEVAVL
QCQSHQKGEEEKAEGNCWADAEAKIAAKRNLPLEIPTEGPLVWNNPLQEIKLQYSPTKTE
WGISWGHSFLPSGWLMTEEGKVFIPEASQWKILKSLHQTFHMGIENTHQRAKSLIIGPNL
LQTIQQVVKAWLGMATATGTRIASLSTSLSYYHTRSKDFSDSLQEITKSILTLQSQIDSL
AAVTLQNHQGLYLLAAEKGGLCTFLGEECCFYTNQSGIVQDAAWHLQEKASEIRQCLSNS
YTNLWSWATWLLPFLGPVTAFLLLLAFGPCIFNLLVKFVSSRIEAIKLQMVLQMEPQMSS
THNFYRGPLDQPTGPLTGLESSPLEDTTTAGSLLCPYLAGSS

>gi568815590r:73846633_74056055|GENSCAN_predicted_CDS_2|2109_bp
atggggatcagagaacttccaaattttcatccatatgctgggaagatggcacaccccaac
tccacaggaacaaaggctcctgttctctgggccattccggaccttgccatctggctgttc
atttgtatactttgtaataaattggtaaacataattaaggctgagctgagggtcaacaga
gaggaaagccattcagctctggggtcccaagaagaagttggttgtccctgcagccctgag
cagagctctcaaagttacgtcacccaaaaggaaacaagcaaagaaatctccaagggacca
caaaaacccctgggctattggttatgtgcccttcaagctgtagggggaggggaattttgc
ccaacccgggtacacgtccccttctccctctctgatttaaagcagatcaaggtagatctg
gggaagttttcagatgatcctgatagccttctcagtgttaatctcctgacccggacagct
gtcctcacagtccgttaccatctgaggaatcctgggacagtctgtaaccagacattaaaa
cagttgcgggggttccttggaagcaccggcttttgccaactatggatccctggatacaat
gagatggccaggccactctatactctaatcaaggagacccagagggcaaatactcatcta
ggagaatgggaaccagaggcagaaacagccttcaaaaccttaaatcaggccccagtacaa
actccagccttaagctttcccacaggaaaaaacttctctttatacatcacagagagagca
gggatagctcttggagtccttactcagactagtgggacaaccccacaaccagtggcatgc
ctaaggacctatgtccagttagcagaactagtggtgcttacccgagccttagaactggga
aagaaaaaaagaataaatgtgtatacagatagcaagtatgcttatctaatcctacatgcc
catgctgcaatatggaaagaaagggagttcgtaacctctgggggaatccccattaaatac
cacaaggatatcatggagttattgcacgcagtgcaaaaacccaaggaggtggctgtctta
cagtgccaaagccatcaaaaaggtgaagaagaaaaggcagaaggaaactgttgggcagac
gctgaggccaaaattgctgccaagcggaacctcccattagaaatacctacggaaggaccc
ttggtatggaacaaccctctccaagagattaagctgcagtattccccgaccaaaacagaa
tggggaatttcatggggccatagttttctcccctctgggtggttaatgacagaagaggga
aaggtattcatacctgaagccagccagtggaaaatacttaagtccctccaccaaactttt
catatgggtattgagaatactcatcaaagggccaaatccctaattatagggccaaatctc
ctccagaccatccagcaagtagtcaaagcctggttaggaatggccactgctacaggaacc
agaatagccagtttatctacttcactatcctactaccacacacgctcaaaggatttctca
gacagtttgcaagaaataacaaaatctatccttactctacaatcccaaatagactctttg
gcagcagtgactctccaaaaccaccaaggcctatacctcctcgctgctgagaaaggagga
ctttgcaccttcttaggggaagagtgttgtttttacactaaccagtcagggatagtgcaa
gacgctgcctggcatttacaggaaaaggcttctgaaatcagacaatgcctttcaaactct
tataccaacctctggagttgggcaacatggcttctcccctttctaggtcccgtgacagcc
ttcttgctattactcgcctttgggccctgtatttttaacctccttgtcaaatttgtttcc
tccaggattgaggccatcaagctacagatggtcttacaaatggaaccccaaatgagctca
actcacaacttctaccgaggacccctggatcaacccactggccctttgactggcctagag
agttcccctctggaggacactacaactgcagggtcccttctttgcccctatctagcagga
agtagctag

>gi568815590r:73846633_74056055|GENSCAN_predicted_peptide_3|179_aa
MEKRVGTSKVKQDSFSQPNDSPQRLNLLPSSWSEEAGTPLPGVTCRLNPCRVLKDSPAVP
PRCPCSLRAALAPSQPAAAPAACTPSSTMTDQAFVTLTTNDAYTKGVLALGSSLKQHRTT
KRLVILTTPQYSKCVFMDADTLVLANIDDLFEREELSAGPDPRWPDCFNSEVFVYQPSV

>gi568815590r:73846633_74056055|GENSCAN_predicted_CDS_3|540_bp
atggagaaaagagtgggaacctcaaaagttaaacaggattcattttcccaacccaatgac
tctcctcaacgactaaatctgctgccatcttcttggagtgaagaagcaggaacaccctta
cctggagttacctgcaggttgaacccctgcagagttttaaaggatagtcccgctgtgcct
cctcgctgcccttgctccctccgtgctgcccttgctccctcccaacctgcggctgccccg
gctgcctgcacccccagcagcaccatgacagatcaggcctttgtgacactgaccacgaat
gatgcctacaccaaaggtgtcctggccctggggtcatctctgaaacagcacaggaccacc
aagagactggtcatactcaccacccctcagtattcaaaatgtgtatttatggatgcggat
actctggtcctagcaaatattgatgatctttttgagagagaagaattgtcagcaggacca
gacccaaggtggcctgactgcttcaattccgaagtcttcgtttatcagccttcagtttaa

>gi568815590r:73846633_74056055|GENSCAN_predicted_peptide_4|80_aa
MAERGQHRVWAVASEGASLNPWQLSNGVEPVSAQMSRIEVWEPLPRFQKIYRNAWMSRQK
FAAGQGSHGDPLIGQCGRKM

>gi568815590r:73846633_74056055|GENSCAN_predicted_CDS_4|243_bp
atggctgaaaggggccaacatagagtttgggccgtggcttcagagggtgcaagcctcaat
ccttggcagctttcaaatggtgttgagcctgtcagtgcacagatgtcaagaattgaggtt
tgggaacctctgcctagatttcagaagatatatcgaaatgcctggatgtccaggcagaag
tttgctgcagggcagggctctcatggggaccctctgatagggcagtgtggaagaaaaatg
tga

>gi568815590r:73846633_74056055|GENSCAN_predicted_peptide_5|112_aa
MDGEEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEV
NFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC

>gi568815590r:73846633_74056055|GENSCAN_predicted_CDS_5|339_bp
atggatggagaggagaaaacctatggtggctgtgaaggacctgatgccatgtatgtcaaa
ttgatatcatctgatggccatgaatttattgtaaaaagagaacatgcattaacatcaggc
acgataaaagccatgttgagtggcccaggtcagtttgctgagaacgaaaccaatgaggtc
aattttagagagataccttcacatgtgctatcgaaagtatgcatgtattttacgtacaag
gttcgctacactaacagctccaccgagattcctgaattcccaattgcacctgaaattgca
ctggaactgctgatggctgcgaacttcttagattgttaa

>gi568815590r:73846633_74056055|GENSCAN_predicted_peptide_6|416_aa
MGESPEPEEVTLAFLVFLEIGQVHSYLKVFAFVIAVVRKAFKSSSFRSPDKTGRPVDARY
PQLMKSSIESPNKLPRSPRLTRQSRSHRSRVPAYCHSPYPRAAPPPPAACSGGFRGSRKN
YFRWVRAAFGDAREIRTCRVGSRVSQSWTRAAGASAAARHPRDAVSGVGQPVGGRTASLR
KEDCIVCGRRAPRSPGLCLPGVLQQRAFGAGSRLEYGAFGSRAPSPASGSSAGYVRFLNT
PSDKSEDGRLIYTGNMARAVFGVKCFSYSTSLIGLTFLPYIFTQNNAISESVPLPIQIIF
YGIMGSFTVITPVLLHFITKGYVIRLYHEATTDTYKAITYNAMLAETSTVFHQNDVKIPD
AKHVFTTFYAKTKSLLVNPVLFPNREDYIHLMGYDKEEFILYMEETSEEKRHKDDK

>gi568815590r:73846633_74056055|GENSCAN_predicted_CDS_6|1251_bp
atgggagaatcacctgagcccgaggaggtcacactggcctttttggtattcctcgaaatc
ggtcaagttcactcttacctcaaggtctttgcatttgtaattgctgttgtccgaaaagct
tttaaatcctcatcatttaggtctccagacaagactggacggccagtagatgcacgatac
ccccaactcatgaagtcgagcatagaatcacccaacaagttacccagaagcccgagactc
actcgtcagtcccgcagccaccgcagccgggtccccgcgtactgccacagcccctatccc
agggccgcccccccacccccagctgcctgctccggtgggttccggggcagtcgaaagaat
tacttccgctgggtcagagccgctttcggcgacgcgcgggagatccgtacctgtcgggtg
ggaagccgtgtctcgcagtcgtggactcgtgcagctggggcgtccgcagccgctcgtcac
ccgcgtgatgctgtttctggcgttgggcagcccgtgggcggtcgaactgcctctctgcgg
aaggaggactgcattgtgtgcggccgccgcgctccgaggtccccgggcctctgtctcccg
ggcgtcctccagcagcgggccttcggggccggtagccggctggagtacggggccttcggg
agccgcgcgccttctccggcgtccgggtcgagcgcaggatatgttcgattcttaaatacg
ccatctgacaaatcagaagatggaaggctaatttatactggcaatatggcccgagcagtg
tttggtgtgaaatgtttctcttattctacgagtctgattggccttacatttctgccatac
atttttacacaaaataatgctatttctgaaagtgtgcctctgcctattcaaatcatattc
tatggcatcatgggaagctttacggtgatcaccccagtgctgcttcactttattacaaaa
ggctatgtcattcgattgtaccatgaggccacaacagacacttataaagccattacctac
aatgctatgcttgcagaaacgagtacagtgtttcaccagaatgatgtgaagattccagat
gctaaacatgtatttaccacattttatgctaaaacaaaatcactgttagttaatccagtg
ctctttccaaaccgtgaagactatatccatctaatgggttatgacaaagaagaatttatt
ttgtatatggaagaaaccagtgaagagaaacggcataaagatgacaaatga

>gi568815590r:73846633_74056055|GENSCAN_predicted_peptide_7|40_aa
MAFKHTRKTPVESEVAIHRIHITLTSCNVKSLDKMYPSNE

>gi568815590r:73846633_74056055|GENSCAN_predicted_CDS_7|123_bp
atggcttttaaacataccagaaaaacacccgtggagtcagaggtggcaattcaccgaatt
catatcactctaacgagttgcaacgtaaaatccctggataagatgtatcctagcaatgaa
tga

>gi568815590r:73846633_74056055|GENSCAN_predicted_peptide_8|103_aa
MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLGADEKCIIVEEGKEILVGDV
GVTITGPFKHFVGMLPEKDCRCALYDASFETKESSTEELIFFL

>gi568815590r:73846633_74056055|GENSCAN_predicted_CDS_8|312_bp
atggcctcaggagtgcaagtagctgatgaagtatgtcgcattttttatgacatgaaagtt
cgtaaatgctccacaccagaagaaatcaagaaaagaaagaaggctgtcattttttgtctc
ggtgcagacgaaaagtgcatcattgtagaagaaggcaaagagatcttggttggagatgtt
ggtgtaaccataactggtcctttcaagcattttgtgggaatgcttcctgaaaaagattgt
cgctgtgctttgtatgatgcaagctttgaaacaaaagaatccagtacagaagagttgatt
ttttttttgtag

>gi568815590r:73846633_74056055|GENSCAN_predicted_peptide_9|272_aa
MALLLLRSEDKLGKLVVLQVQSNEGLHEGSAVMGMKRRLERFTGTGNSSANLVMKRRKSL
LDLLGRDLKQLYFNLYITVNTMNLPKRKEVICRGSDDDYSFCRALKGGHHHQRPKVGKTT
KMGSNQSRKAENSKNQSVSSPKDRSSSPATEQSWMENDFDELTEEGFRRSVITNFAELKE
DVRTHRKEAKNLEKGLDEWLTRINSVEKTLNDLMEMKSVARELHDTCRSFSSQFDQVEER
VSVIEDQISEMKQEEKFREKRVVRNEQSLQET

>gi568815590r:73846633_74056055|GENSCAN_predicted_CDS_9|819_bp
atggcccttctcctgttgagaagtgaagacaaattaggaaagttggtggtgcttcaggtt
cagagcaatgagggcctacatgaaggcagcgcggtaatggggatgaaaaggaggttagaa
agatttactgggactgggaattctagtgccaacttggtgatgaagaggaggaaatcactt
ttagatctgttggggagagatttaaagcaattatatttcaatctctatataactgtcaac
accatgaatcttccaaagcgcaaagaagttatttgccgaggatctgatgacgattactct
ttttgcagagctctgaagggaggtcaccatcatcaaagaccaaaggtaggtaaaaccaca
aagatggggagcaaccagagcagaaaagctgaaaattctaaaaaccagagtgtctcttct
ccaaaggatcgcagctcctcgccagcaacggaacaaagctggatggagaatgactttgat
gagttgacagaagaaggctttagaaggtcagtaataacaaacttcgctgagctaaaggag
gatgttcgaacccatcgcaaggaagctaaaaaccttgaaaaaggattggatgaatggcta
actagaataaacagtgtagagaagaccttaaatgacctgatggagatgaaaagcgtggca
cgagaactacatgacacatgcagaagcttcagtagccaattcgatcaagtggaagaaagg
gtatcagtgattgaagatcaaattagtgaaatgaagcaagaagagaagtttagagaaaaa
agagtagtaagaaatgaacaaagcctccaagaaacatga

>gi568815590r:73846633_74056055|GENSCAN_predicted_peptide_10|189_aa
MGYFNTPLSILDRSMRQKVNKDIQDLNTVLHQADLIDIYRTLHPKSTEYTFFSAPHCTYS
KIDHIVGSKALLSKCKRTEITTNCLSDHNAIKLELRIKKLTKNYTTTWKLNNLLLSDYWV
HNEMKAEIKIFFETNENKDITYQNLWDTFKSVCRGKFIALNAHKRKQKRSKIDTLTSQLK
ELEKQEQTH

>gi568815590r:73846633_74056055|GENSCAN_predicted_CDS_10|570_bp
atgggatactttaacaccccactgtcaatattagacagatcaatgagacagaaggttaac
aaggatatccaggacttgaacacagttctgcaccaagcagacctaatagacatctacaga
actctccaccccaaatcaacagaatatacattcttctcagcaccacattgcacttattcc
aaaattgaccacatagttggaagtaaagcactcctcagcaaatgtaaaagaacagaaatc
acaacaaactgtctttcagaccacaatgcaatcaaattagaactcaggattaagaaactc
actaaaaactacacaactacatggaaactgaacaacctgctcctaagtgactactgggta
cataacgaaatgaaggcagaaataaagatattctttgaaaccaatgagaacaaagacata
acgtaccagaatctctgggacacatttaaatcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcagaaaagatctaaaatcgacaccctaacatcacaattaaaa
gaactagagaagcaagagcaaacacattga

>gi568815590r:73846633_74056055|GENSCAN_predicted_peptide_11|166_aa
MRDMVVMDRKGGNYNRKGGNPITDTLSGGRKLGSVQKPLDNTGVAPARNPQLLQNLFQPH
ATAKSSLKFICILLLGCEKWQPDPQFGPGTKPGFHQEQRVAGCTGQKRGGDPMVPAGKWA
AGTKNRSREALHPKDEANLILAHKLFDVLLDLVCQYFIEDFLIDVH

>gi568815590r:73846633_74056055|GENSCAN_predicted_CDS_11|501_bp
atgagagatatggtggtcatggacaggaaaggaggaaattacaataggaaaggtggcaat
cctattactgacaccctatcaggtggtcggaagctggggtcagtccagaagcctttggat
aacacgggggtagccccagccagaaatcctcagttgctccaaaacctcttccagccccat
gcaacagctaagtcctctctgaaattcatctgcatcttgctattgggctgcgagaaatgg
cagcccgaccctcagtttggtccaggaacaaagccaggatttcaccaggagcagagggta
gcaggttgcactggacagaagaggggaggggatcccatggtgccagcagggaagtgggca
gcgggaaccaagaaccggtccagggaagccttgcatcccaaggatgaagccaacttgatc
ttggcgcataagctttttgatgtgttgctggatttggtttgccagtattttattgaggat
tttctcatcgatgttcattag