Result of FASTA (ccds) for pF1KB7441
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7441, 215 aa
  1>>>pF1KB7441 215 - 215 aa - 215 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3484+/-0.000813; mu= 13.4821+/- 0.049
 mean_var=64.5088+/-12.788, 0's: 0 Z-trim(106.7): 26  B-trim: 0 in 0/49
 Lambda= 0.159685
 statistics sampled from 9140 (9154) to 9140 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.281), width:  16
 Scan time:  2.040

The best scores are:                                      opt bits E(32554)
CCDS1468.1 IL19 gene_id:29949|Hs108|chr1           ( 215) 1472 347.6 3.6e-96
CCDS1469.1 IL19 gene_id:29949|Hs108|chr1           ( 177) 1184 281.2 2.9e-76
CCDS1470.1 IL20 gene_id:50604|Hs108|chr1           ( 176)  457 113.7 7.4e-26
CCDS1471.1 IL24 gene_id:11009|Hs108|chr1           ( 206)  247 65.3 3.1e-11
CCDS53465.1 IL24 gene_id:11009|Hs108|chr1          ( 207)  247 65.3 3.1e-11


>>CCDS1468.1 IL19 gene_id:29949|Hs108|chr1                (215 aa)
 initn: 1472 init1: 1472 opt: 1472  Z-score: 1840.1  bits: 347.6 E(32554): 3.6e-96
Smith-Waterman score: 1472; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)

               10        20        30        40        50        60
pF1KB7 MCTEGAFPHRSACSLPLTHVHTHIHVCVPVLWGSVPRGMKLQCVSLWLLGTILILCSVDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MCTEGAFPHRSACSLPLTHVHTHIHVCVPVLWGSVPRGMKLQCVSLWLLGTILILCSVDN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 HGLRRCLISTDMHHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVCCVTKNLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HGLRRCLISTDMHHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVCCVTKNLL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 AFYVDRVFKDHQEPNPKILRKISSIANSFLYMQKTLRQCQEQRQCHCRQEATNATRVIHD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 AFYVDRVFKDHQEPNPKILRKISSIANSFLYMQKTLRQCQEQRQCHCRQEATNATRVIHD
              130       140       150       160       170       180

              190       200       210     
pF1KB7 NYDQLEVHAAAIKSLGELDVFLAWINKNHEVMFSA
       :::::::::::::::::::::::::::::::::::
CCDS14 NYDQLEVHAAAIKSLGELDVFLAWINKNHEVMFSA
              190       200       210     

>>CCDS1469.1 IL19 gene_id:29949|Hs108|chr1                (177 aa)
 initn: 1184 init1: 1184 opt: 1184  Z-score: 1482.8  bits: 281.2 E(32554): 2.9e-76
Smith-Waterman score: 1184; 100.0% identity (100.0% similar) in 177 aa overlap (39-215:1-177)

       10        20        30        40        50        60        
pF1KB7 HRSACSLPLTHVHTHIHVCVPVLWGSVPRGMKLQCVSLWLLGTILILCSVDNHGLRRCLI
                                     ::::::::::::::::::::::::::::::
CCDS14                               MKLQCVSLWLLGTILILCSVDNHGLRRCLI
                                             10        20        30

       70        80        90       100       110       120        
pF1KB7 STDMHHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVCCVTKNLLAFYVDRVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 STDMHHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVCCVTKNLLAFYVDRVF
               40        50        60        70        80        90

      130       140       150       160       170       180        
pF1KB7 KDHQEPNPKILRKISSIANSFLYMQKTLRQCQEQRQCHCRQEATNATRVIHDNYDQLEVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KDHQEPNPKILRKISSIANSFLYMQKTLRQCQEQRQCHCRQEATNATRVIHDNYDQLEVH
              100       110       120       130       140       150

      190       200       210     
pF1KB7 AAAIKSLGELDVFLAWINKNHEVMFSA
       :::::::::::::::::::::::::::
CCDS14 AAAIKSLGELDVFLAWINKNHEVMFSA
              160       170       

>>CCDS1470.1 IL20 gene_id:50604|Hs108|chr1                (176 aa)
 initn: 436 init1: 403 opt: 457  Z-score: 577.7  bits: 113.7 E(32554): 7.4e-26
Smith-Waterman score: 457; 40.2% identity (72.4% similar) in 174 aa overlap (39-207:1-174)

       10        20        30        40        50        60        
pF1KB7 HRSACSLPLTHVHTHIHVCVPVLWGSVPRGMKLQCVSLWLLGTILILCSVDNHGLRR---
                                     :: . ... ::.. . :  . . ::.    
CCDS14                               MKASSLAFSLLSAAFYLLWTPSTGLKTLNL
                                             10        20        30

            70        80        90       100       110       120   
pF1KB7 --CLISTDMHHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVCCVTKNLLAFY
         :.:.:....:...:.::. ..::::   .. ::   :.::  :: . ::. ..:: .:
CCDS14 GSCVIATNLQEIRNGFSEIRGSVQAKDGNIDIRILRRTESLQDTKPANRCCLLRHLLRLY
               40        50        60        70        80        90

           130       140       150       160       170       180   
pF1KB7 VDRVFKDHQEPNPKILRKISSIANSFLYMQKTLRQCQEQRQCHCRQEATNATRVIHDNYD
       .:::::..: :.   ::::::.::::: ..: :: :. .  ::: .:: .    : ....
CCDS14 LDRVFKNYQTPDHYTLRKISSLANSFLTIKKDLRLCHAHMTCHCGEEAMKKYSQILSHFE
              100       110       120       130       140       150

           190       200       210     
pF1KB7 QLEVHAAAIKSLGELDVFLAWINKNHEVMFSA
       .:: .::..:.:::::..: :...        
CCDS14 KLEPQAAVVKALGELDILLQWMEETE      
              160       170            

>>CCDS1471.1 IL24 gene_id:11009|Hs108|chr1                (206 aa)
 initn: 214 init1: 127 opt: 247  Z-score: 315.2  bits: 65.3 E(32554): 3.1e-11
Smith-Waterman score: 247; 28.4% identity (65.8% similar) in 190 aa overlap (27-207:18-202)

               10        20        30        40        50          
pF1KB7 MCTEGAFPHRSACSLPLTHVHTHIHVCVPVLWGSVPRGMKLQCVSLWLLG-TILILCSVD
                                 : :.:      . ..: : :  :: :.:.  .:.
CCDS14          MNFQQRLQSLWTLARPFCPPLL----ATASQMQMVVLPCLGFTLLLWSQVS
                        10        20            30        40       

      60             70         80        90       100       110   
pF1KB7 N-HGLRR----CLISTDM-HHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVC
       . .: .     : ..  . ... :.:  .: ..::.:.. .. .:.  :.:: ..  . :
CCDS14 GAQGQEFHFGPCQVKGVVPQKLWEAFWAVKDTMQAQDNITSARLLQQ-EVLQNVSDAESC
        50        60        70        80        90        100      

           120       130         140       150       160       170 
pF1KB7 CVTKNLLAFYVDRVFKDHQEPNPKI--LRKISSIANSFLYMQKTLRQCQEQRQCHCRQEA
        ....:: ::.  :::.... . ..  :...:..::.:. . . :.  ::...   :. :
CCDS14 YLVHTLLEFYLKTVFKNYHNRTVEVRTLKSFSTLANNFVLIVSQLQPSQENEMFSIRDSA
        110       120       130       140       150       160      

             180       190       200       210     
pF1KB7 TNATRVIHDNYDQLEVHAAAIKSLGELDVFLAWINKNHEVMFSA
            ...  . ::.:.::  :.:::.:..:.:..:        
CCDS14 HRRFLLFRRAFKQLDVEAALTKALGEVDILLTWMQKFYKL    
        170       180       190       200          

>>CCDS53465.1 IL24 gene_id:11009|Hs108|chr1               (207 aa)
 initn: 216 init1: 127 opt: 247  Z-score: 315.1  bits: 65.3 E(32554): 3.1e-11
Smith-Waterman score: 247; 28.4% identity (65.8% similar) in 190 aa overlap (27-207:19-203)

               10        20        30        40        50          
pF1KB7 MCTEGAFPHRSACSLPLTHVHTHIHVCVPVLWGSVPRGMKLQCVSLWLLG-TILILCSVD
                                 : :.:      . ..: : :  :: :.:.  .:.
CCDS53         MNFQQRLQSLWTLASRPFCPPLL----ATASQMQMVVLPCLGFTLLLWSQVS
                       10        20            30        40        

      60             70         80        90       100       110   
pF1KB7 N-HGLRR----CLISTDM-HHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVC
       . .: .     : ..  . ... :.:  .: ..::.:.. .. .:.  :.:: ..  . :
CCDS53 GAQGQEFHFGPCQVKGVVPQKLWEAFWAVKDTMQAQDNITSARLLQQ-EVLQNVSDAESC
       50        60        70        80        90        100       

           120       130         140       150       160       170 
pF1KB7 CVTKNLLAFYVDRVFKDHQEPNPKI--LRKISSIANSFLYMQKTLRQCQEQRQCHCRQEA
        ....:: ::.  :::.... . ..  :...:..::.:. . . :.  ::...   :. :
CCDS53 YLVHTLLEFYLKTVFKNYHNRTVEVRTLKSFSTLANNFVLIVSQLQPSQENEMFSIRDSA
       110       120       130       140       150       160       

             180       190       200       210     
pF1KB7 TNATRVIHDNYDQLEVHAAAIKSLGELDVFLAWINKNHEVMFSA
            ...  . ::.:.::  :.:::.:..:.:..:        
CCDS53 HRRFLLFRRAFKQLDVEAALTKALGEVDILLTWMQKFYKL    
       170       180       190       200           




215 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 07:50:46 2016 done: Fri Nov  4 07:50:47 2016
 Total Scan time:  2.040 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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