GENSCAN 1.0	Date run:  4-Nov-116	Time: 07:32:13

Sequence gi568815577f:36906773_37118204 : 211432 bp : 43.73% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -   7914   7774  141  0  0   93   92    42 0.593   5.65
 1.05 Intr -  15715  15680   36  1  0  101   79    32 0.081   2.06
 1.04 Intr -  23661  23479  183  0  0  122  105   -23 0.132   2.78
 1.03 Intr -  30620  29677  944  0  2   61   78   796 0.647  66.78
 1.02 Intr -  32222  32060  163  2  1  107   75    88 0.553   8.95
 1.01 Init -  59866  59672  195  1  0   90   80   338 0.961  30.13
 1.00 Prom -  81770  81731   40                              -2.86

 2.00 Prom +  85330  85369   40                              -6.26
 2.01 Sngl +  88049  88303  255  1  0   87   55   265 0.643  18.21
 2.02 PlyA +  88912  88917    6                               1.05

 3.00 Prom +  88950  88989   40                              -4.66
 3.01 Init +  97708  97742   35  0  2   67   89    48 0.472   2.15
 3.02 Term +  99172  99322  151  1  1   38   48   149 0.494   3.28
 3.03 PlyA + 101209 101214    6                              -0.45

 4.04 PlyA - 102639 102634    6                               1.05
 4.03 Term - 103219 103002  218  2  2   46   38   275 0.614  15.61
 4.02 Intr - 103989 103852  138  1  0   42   91    57 0.684   1.84
 4.01 Init - 109520 109514    7  2  1   97   98     0 0.488   2.93
 4.00 Prom - 117624 117585   40                               2.44

 5.00 Prom + 136135 136174   40                              -1.36
 5.01 Init + 143451 143618  168  2  0   94   45   158 0.575  11.63
 5.02 Intr + 166335 166592  258  2  0   39  100   281 0.951  22.06
 5.03 Intr + 166652 166701   50  1  2   76   89    17 0.838  -1.92
 5.04 Intr + 166814 166925  112  2  1   39   90    76 0.262   3.28
 5.05 Intr + 167089 167203  115  0  1   84   23    19 0.015  -4.98
 5.06 Intr + 167262 167396  135  1  0   76   43    65 0.023   1.34
 5.07 Intr + 180475 180629  155  2  2   98  103   136 0.935  15.89
 5.08 Intr + 188578 188672   95  0  2   69   82    52 0.232   1.46
 5.09 Intr + 194834 194906   73  2  1  102   78    10 0.053   0.81
 5.10 Term + 203395 203745  351  0  0   70   42   328 0.119  20.89
 5.11 PlyA + 204203 204208    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 158940 158810  131  1  2   79   43    92 0.946   2.14
S.002 Intr - 160608 160490  119  2  2   64   93    78 0.945   6.01
S.003 Init - 160863 160856    8  0  2   75  107     0 0.910   1.06
S.004 Init + 178795 178855   61  0  1   81   72    35 0.866   2.61
S.005 Sngl + 203416 203745  330  0  0   71   42   314 0.879  21.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577f:36906773_37118204|GENSCAN_predicted_peptide_1|554_aa
MLITLCYLYLWARWGRRPAELVRATVRRLRASRCSFTFCGAAAQPPGARVCLSRGGRVFC
VSDSQIVKWSDCCLPLACRPGDPYRLIAEASVDNFSKLGVAFMEDRLHMDNGLVPQKIVS
VHLQDSTLKEVKDQVSNKQAQILEPKPEPSLEIKPEQDGMEHVGRDDPKALGEEPKQRRG
SASGSEPAGDSDRGGGPVEHYHLHLSSCHECLELENSTIESVKFASAENIPDLPYDYSSS
LESVADETSPEREGRRVNLTGKAPNILLYVGSDSQEALGRFHEVRSVLADCVDIDSYILY
HLLEDSALRDPWTDNCLLLVIATRESIPEDLYQKFMAYLSQGGKVLGLSSSFTFGGFQVT
SKGALHKTVQNLVFSKADQSEVKLSVLSSGCRYQEGPVRLSPGRLQGHLENEDKDRMIVH
VPFGTRGGEAVLCQVHLELPPSSNIVQTPEDFNLLKSSNFRRYEVLREILTTLGLSCDMK
QVPALTPLYLLSAAEVQHAEFGHTAIQNRFRFYSEPVWLGGGVMPIKPALLEMTYSLPAF
TVLLKPFVVFASWQ

>gi568815577f:36906773_37118204|GENSCAN_predicted_CDS_1|1662_bp
atgctcatcacgctgtgctacctgtacctgtgggcgcgctggggtcgccggccggctgag
ctcgtgcgcgccacggtgcggcggctgcgtgcctcgcgctgttccttcaccttctgcggc
gcggccgcgcagcccccgggcgcccgcgtgtgcctgagccgtggcggccgcgtcttctgc
gtcagcgacagccagattgtcaagtggtcagactgttgtttgccattagcttgcagacct
ggggatccttatcggctaattgctgaagcaagtgtggacaacttcagcaagctgggggtg
gcgttcatggaagatagactccacatggataatggactggtaccccaaaagattgtgtcg
gtgcacttgcaggactccactctgaaggaagttaaggatcaggtctcaaacaagcaagcc
cagatcctagagccgaagcctgaaccttctcttgagattaagcctgagcaggacggtatg
gagcatgttggcagagatgacccaaaggctcttggtgaagaacccaaacaaaggagaggc
agtgcctctgggagtgagcctgctggggacagtgacaggggagggggccccgttgagcat
tatcacctccatctgtctagttgccacgagtgtctggaacttgagaacagcaccattgag
tcagtcaagtttgcgtctgccgagaacattccagaccttccctacgattatagcagcagt
ttggagagtgttgctgatgagacctcccccgaaagagaagggaggagagtcaacctcacg
ggaaaggcacccaacatcctcctctatgtgggctccgactcccaggaagccctcggccgg
ttccacgaggtccggtctgtgctggccgactgtgtggacattgacagttatattctctac
cacctgctggaggacagtgctctcagagacccgtggacggacaactgtctgctgttggtc
attgctaccagggagtccattcccgaagacctgtaccagaagttcatggcctatctttct
cagggagggaaggtgttgggcctgtcttcatccttcacctttggtggctttcaggtgaca
agcaagggtgcactgcacaagacagtccagaacttggttttctccaaggctgaccagagc
gaggtgaagctcagcgtcttgagcagtggctgcaggtaccaggaaggccccgtccggctc
agccccggcaggctccagggccacctggagaatgaggacaaggacaggatgattgtgcat
gtgccttttggaactcgcgggggagaagctgttctttgccaggtgcacttagaactacct
cccagctccaacatagtgcaaactccagaagattttaacttgctcaagtcaagcaatttt
agaagatacgaagtccttagagagattctgacaacccttggcctcagctgtgacatgaaa
caagttcctgccttaactcctctttacttgctgtcagctgcggaggtacagcatgccgag
tttggccacacagctatccagaatagattccgcttctacagtgagcctgtttggcttggt
ggaggtgtgatgcctataaaaccagccttattagaaatgacttattcactccctgctttt
actgttctactcaagccttttgtggtcttcgctagttggcag

>gi568815577f:36906773_37118204|GENSCAN_predicted_peptide_2|84_aa
MRTLWINRITAATQEHGPKYPAFTGNLIKCQVKRHKKVPANLAIYEPETFKSLAALANRR
RQEEFAAALGDGKAAYFSRMVQYR

>gi568815577f:36906773_37118204|GENSCAN_predicted_CDS_2|255_bp
atgaggaccctctggattaatcgaattacagctgctacccaggaacacggcccgaagtac
ccagcgttcactggcaatttaattaagtgccaggtgaagcgccacaagaaagtcccagcg
aatctggccatctacgaaccagagacttttaaatctttggctgccttggccaataggagg
cgacaggaagaatttgctgctgccttaggagatgggaaggcagcatatttttccagaatg
gtacagtaccgctga

>gi568815577f:36906773_37118204|GENSCAN_predicted_peptide_3|61_aa
MSYCSLNFLELRVAAPHPTRFATGSSPGVGASGSPLSSTEGKAGARGPEDSVDVPEDPLP
L

>gi568815577f:36906773_37118204|GENSCAN_predicted_CDS_3|186_bp
atgtcttactgcagcctcaacttcctcgagctcagggtcgccgcgccccaccccacccgc
ttcgccacgggttcgagccctggcgtcggggcgtccgggagcccactgtccagcaccgaa
ggcaaggccggtgcacgcggacccgaggattcggtagatgtccccgaagacccgctgccg
ctctaa

>gi568815577f:36906773_37118204|GENSCAN_predicted_peptide_4|120_aa
MEGLRSGSLADRAGPEEQTVPDVFQETASLTVPASGQEGNATEIKKGAGNPGRCTVPEHR
LALVALRNQLGSAKSGLRARGEDWRALQPPGNNHSSHTHIRGQNYFSVTGYLLISEKVNV

>gi568815577f:36906773_37118204|GENSCAN_predicted_CDS_4|363_bp
atggaggggctaagaagtgggagcctggcagatagggcaggcccagaagaacaaacagtc
cctgatgttttccaggaaactgcctccctgacagtgcccgcaagtggccaggagggaaac
gcaacagagatcaagaaaggtgcagggaacccagggcggtgcacagtaccagagcacaga
ctggcgctggtcgctctgcgcaaccagctgggctctgcaaagagcgggctccgggctagg
ggtgaggattggcgggctctacagcccccagggaacaaccactcttcccacacccacatc
cgtggacagaactacttcagcgtgacaggctacctgctgatcagcgagaaagttaacgtt
taa

>gi568815577f:36906773_37118204|GENSCAN_predicted_peptide_5|503_aa
MEIQKIIQGYYEHLYAHKLENLEEMDKFLEKHNPPSFNQEELDTLNRPITSSKIEMAHND
PPRVGASERGGGRDPAARDGEGGGGGVRLRTRAASPRDAPRFNAATRSLPPSADVEGRRW
RRRRRRLLLLLPASEARGRRARPRCRGSGAFHTPSVGVCGFAPLVWCPFASEALGCRCEG
VSSPFVRNPPLPVPRPRAWPRLLQLRPPPRALLAQVCVLACLRVTQSVCAWVLLSFVGER
ERSCTPLAVCACHDSVATCFRVNWQSSPGPVPTERTQEGDLCTMDNFAEGDFTVADYALL
EDCPHVDDCVFAAEFMSNDYVRVTQLYCDGVEGELMKMKGNEEFSKERFDIAIIYYTRAI
EYRSLCIPIIFYAYTSIYVEPDEIAIFERSSSPAMEQSWTENDFDELREEGFRRSNYSEL
KEEVRTNGKEVRNFEKKLDEWITRITNAEKSLKDLMELKTTARELCDKCTNLSNRCDQLE
ERVSAMEDEMNEMKHEDKFREKE

>gi568815577f:36906773_37118204|GENSCAN_predicted_CDS_5|1512_bp
atggaaatacaaaagatcattcaaggctactatgaacacctttatgcacataaactagaa
aacctagaagagatggataaattcctggaaaaacacaaccctccaagcttcaatcaggaa
gaattagataccctgaacagaccaataacaagcagcaagattgaaatggcgcacaacgac
cctccccgggtgggagccagcgagcgcgggggcgggcgtgatcccgcggctcgcgacggc
gaaggagggggcggtggggtgcgactgcgcacgcgcgctgccagcccacgtgacgcacct
cgcttcaacgccgccacccgctccctcccgccgtcggctgacgtggagggccggaggtgg
cggcggcggcggcggcggctgctgctgctgctgcccgcgtccgaggctcgcgggcggcgg
gcccggccgagatgccgggggagcggggccttccacaccccctccgtgggtgtgtgtggg
tttgcccccttggtctggtgccccttcgcgagcgaggccctgggatgccggtgcgagggt
gtgagtagtccctttgtgcgcaaccccccgctgcccgtgcctcggccgcgcgcgtggccg
cgccttctgcaattgcgacccccgcctagagccttgctcgcgcaagtgtgcgtccttgcg
tgtctccgagtgacgcagagtgtctgcgcatgggtcctgttgagtttcgttggtgagcgt
gaacgttcgtgcacaccccttgctgtgtgtgcgtgtcacgactctgttgccacctgtttt
cgtgtgaactggcagtccagtccagggcctgtccccacggaacggacccaggagggggac
ttgtgcaccatggacaattttgctgagggagatttcactgtggcggattatgccttgtta
gaagattgccctcacgtggatgattgtgtctttgctgctgaatttatgagcaatgattat
gttcgtgtgactcagctttactgtgatggggtggaaggagaactaatgaaaatgaaagga
aatgaagagttttccaaagaaagatttgatatagctattatctattacaccagagccatt
gaatatagatccttgtgtattcccataatattttatgcctatacaagcatttatgttgaa
ccagatgaaattgccatttttgaacgcagctcctcaccagcaatggaacaaagctggacg
gagaatgactttgacgagttgagagaggaaggcttcagaagatcaaactactccgagcta
aaggaggaagttcgaaccaatggcaaagaagttagaaactttgaaaaaaaattagatgaa
tggataactagaataaccaatgcagagaagtccttaaaggacctgatggagctgaaaacc
acggcacgagaactatgtgacaaatgcacaaacctcagtaaccgatgcgatcaactggaa
gaaagggtatcagcgatggaagatgaaatgaatgaaatgaagcatgaagataagtttaga
gaaaaagaataa