Result of FASTA (ccds) for pF1KB7365
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7365, 188 aa
  1>>>pF1KB7365 188 - 188 aa - 188 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7494+/-0.00072; mu= 12.9649+/- 0.044
 mean_var=110.4221+/-22.464, 0's: 0 Z-trim(113.3): 28  B-trim: 675 in 1/52
 Lambda= 0.122052
 statistics sampled from 13912 (13937) to 13912 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.79), E-opt: 0.2 (0.428), width:  16
 Scan time:  2.140

The best scores are:                                      opt bits E(32554)
CCDS14343.1 SSX7 gene_id:280658|Hs108|chrX         ( 188) 1296 237.8   3e-63
CCDS48129.1 SSX2B gene_id:727837|Hs108|chrX        ( 188) 1097 202.7 1.1e-52
CCDS14344.2 SSX2 gene_id:6757|Hs108|chrX           ( 188) 1097 202.7 1.1e-52
CCDS14291.1 SSX3 gene_id:10214|Hs108|chrX          ( 188) 1088 201.2 3.2e-52
CCDS14289.1 SSX5 gene_id:6758|Hs108|chrX           ( 188) 1071 198.2 2.5e-51
CCDS35241.1 SSX4B gene_id:548313|Hs108|chrX        ( 188) 1048 194.1 4.2e-50
CCDS35240.1 SSX4 gene_id:6759|Hs108|chrX           ( 188) 1048 194.1 4.2e-50
CCDS14290.1 SSX1 gene_id:6756|Hs108|chrX           ( 188)  998 185.3 1.9e-47
CCDS14288.1 SSX5 gene_id:6758|Hs108|chrX           ( 229)  934 174.1 5.4e-44
CCDS14345.2 SSX2 gene_id:6757|Hs108|chrX           ( 223)  883 165.1 2.7e-41
CCDS65267.1 SSX2B gene_id:727837|Hs108|chrX        ( 223)  883 165.1 2.7e-41
CCDS43935.1 SSX4B gene_id:548313|Hs108|chrX        ( 153)  575 110.7 4.3e-25
CCDS43934.1 SSX4 gene_id:6759|Hs108|chrX           ( 153)  575 110.7 4.3e-25


>>CCDS14343.1 SSX7 gene_id:280658|Hs108|chrX              (188 aa)
 initn: 1296 init1: 1296 opt: 1296  Z-score: 1248.9  bits: 237.8 E(32554): 3e-63
Smith-Waterman score: 1296; 100.0% identity (100.0% similar) in 188 aa overlap (1-188:1-188)

               10        20        30        40        50        60
pF1KB7 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI
              130       140       150       160       170       180

               
pF1KB7 SDPEEDDE
       ::::::::
CCDS14 SDPEEDDE
               

>>CCDS48129.1 SSX2B gene_id:727837|Hs108|chrX             (188 aa)
 initn: 1097 init1: 1097 opt: 1097  Z-score: 1059.6  bits: 202.7 E(32554): 1.1e-52
Smith-Waterman score: 1097; 85.6% identity (92.6% similar) in 188 aa overlap (1-188:1-188)

               10        20        30        40        50        60
pF1KB7 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK
       ::::::::::: .::::::::::.::::::::::.::::::. ::: :::::::::::::
CCDS48 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG
       ::::::::::: :  : :.::::.::: :.::::::::::: ::: : ::::::::::::
CCDS48 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI
       :::. :::::: :::::.:::::::.:::::.. ::::::.:::::::::::::::::::
CCDS48 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI
              130       140       150       160       170       180

               
pF1KB7 SDPEEDDE
       ::::::::
CCDS48 SDPEEDDE
               

>>CCDS14344.2 SSX2 gene_id:6757|Hs108|chrX                (188 aa)
 initn: 1097 init1: 1097 opt: 1097  Z-score: 1059.6  bits: 202.7 E(32554): 1.1e-52
Smith-Waterman score: 1097; 85.6% identity (92.6% similar) in 188 aa overlap (1-188:1-188)

               10        20        30        40        50        60
pF1KB7 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK
       ::::::::::: .::::::::::.::::::::::.::::::. ::: :::::::::::::
CCDS14 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG
       ::::::::::: :  : :.::::.::: :.::::::::::: ::: : ::::::::::::
CCDS14 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI
       :::. :::::: :::::.:::::::.:::::.. ::::::.:::::::::::::::::::
CCDS14 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI
              130       140       150       160       170       180

               
pF1KB7 SDPEEDDE
       ::::::::
CCDS14 SDPEEDDE
               

>>CCDS14291.1 SSX3 gene_id:10214|Hs108|chrX               (188 aa)
 initn: 1088 init1: 1088 opt: 1088  Z-score: 1051.0  bits: 201.2 E(32554): 3.2e-52
Smith-Waterman score: 1088; 85.1% identity (91.5% similar) in 188 aa overlap (1-188:1-188)

               10        20        30        40        50        60
pF1KB7 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK
       :::::.::::: .::::::::::.::::::::::.::::::  ::: :::::::::::::
CCDS14 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG
       ::::: :: ::.:  .::.:::::::: :.::::.:::::: ::: ::::::::::::::
CCDS14 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI
       : :: :::::: :::::.:::::::.::::::  ::::::.:::::::::::::::::::
CCDS14 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISGPKRGEHAWTHRLRERKQLVIYEEI
              130       140       150       160       170       180

               
pF1KB7 SDPEEDDE
       ::::::::
CCDS14 SDPEEDDE
               

>>CCDS14289.1 SSX5 gene_id:6758|Hs108|chrX                (188 aa)
 initn: 1071 init1: 1071 opt: 1071  Z-score: 1034.8  bits: 198.2 E(32554): 2.5e-51
Smith-Waterman score: 1071; 83.0% identity (93.6% similar) in 188 aa overlap (1-188:1-188)

               10        20        30        40        50        60
pF1KB7 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK
       :::::::.::::.:.:::::.::.:::::::::.:::::::. ::: :::::::::::::
CCDS14 MNGDDAFVRRPRVGSQIPEKMQKAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG
       :::::::::::.:  ..:.:::::::: :.:::::.::::: ::: ::::: :.::::::
CCDS14 LGFKATLPPFMRNKRVADFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI
       ::::::::::: ::.::.: : :: .::::.::::::::::::::::.::::::::::::
CCDS14 NDSKGVPEASGPQNNGKQLRPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEI
              130       140       150       160       170       180

               
pF1KB7 SDPEEDDE
       :::.::::
CCDS14 SDPQEDDE
               

>>CCDS35241.1 SSX4B gene_id:548313|Hs108|chrX             (188 aa)
 initn: 1048 init1: 1048 opt: 1048  Z-score: 1012.9  bits: 194.1 E(32554): 4.2e-50
Smith-Waterman score: 1048; 82.4% identity (90.4% similar) in 188 aa overlap (1-188:1-188)

               10        20        30        40        50        60
pF1KB7 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK
       ::::::::::::  ::: ::..:.:::::::::::::::::: ::: ::::: .::.:::
CCDS35 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG
       ::::.::::::..  :.:..:::: ::::. ::::::::::  :::::::::::::::: 
CCDS35 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI
       :  : :::::: :::::.:::::.::: :::::::::::::::::::::::::::.::::
CCDS35 NGLKEVPEASGPQNDGKQLCPPGNPSTLEKINKTSGPKRGKHAWTHRLRERKQLVVYEEI
              130       140       150       160       170       180

               
pF1KB7 SDPEEDDE
       ::::::::
CCDS35 SDPEEDDE
               

>>CCDS35240.1 SSX4 gene_id:6759|Hs108|chrX                (188 aa)
 initn: 1048 init1: 1048 opt: 1048  Z-score: 1012.9  bits: 194.1 E(32554): 4.2e-50
Smith-Waterman score: 1048; 82.4% identity (90.4% similar) in 188 aa overlap (1-188:1-188)

               10        20        30        40        50        60
pF1KB7 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK
       ::::::::::::  ::: ::..:.:::::::::::::::::: ::: ::::: .::.:::
CCDS35 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG
       ::::.::::::..  :.:..:::: ::::. ::::::::::  :::::::::::::::: 
CCDS35 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI
       :  : :::::: :::::.:::::.::: :::::::::::::::::::::::::::.::::
CCDS35 NGLKEVPEASGPQNDGKQLCPPGNPSTLEKINKTSGPKRGKHAWTHRLRERKQLVVYEEI
              130       140       150       160       170       180

               
pF1KB7 SDPEEDDE
       ::::::::
CCDS35 SDPEEDDE
               

>>CCDS14290.1 SSX1 gene_id:6756|Hs108|chrX                (188 aa)
 initn: 998 init1: 998 opt: 998  Z-score: 965.4  bits: 185.3 E(32554): 1.9e-47
Smith-Waterman score: 998; 79.3% identity (88.8% similar) in 188 aa overlap (1-188:1-188)

               10        20        30        40        50        60
pF1KB7 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK
       :::::.::.:::  :.  :: .:.::::: :::::::.:::  ::::::::::.:.::::
CCDS14 MNGDDTFAKRPRDDAKASEKRSKAFDDIATYFSKKEWKKMKYSEKISYVYMKRNYKAMTK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG
       ::::.:::::: :  :::.::::::::.:.  :::.::::: ::.::.::::::::::. 
CCDS14 LGFKVTLPPFMCNKQATDFQGNDFDNDHNRRIQVEHPQMTFGRLHRIIPKIMPKKPAEDE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI
       :::::: :::: :::::.: :::: . :::::: ::::::::::::::::::::::::::
CCDS14 NDSKGVSEASGPQNDGKQLHPPGKANISEKINKRSGPKRGKHAWTHRLRERKQLVIYEEI
              130       140       150       160       170       180

               
pF1KB7 SDPEEDDE
       ::::::::
CCDS14 SDPEEDDE
               

>>CCDS14288.1 SSX5 gene_id:6758|Hs108|chrX                (229 aa)
 initn: 934 init1: 934 opt: 934  Z-score: 903.4  bits: 174.1 E(32554): 5.4e-44
Smith-Waterman score: 934; 82.5% identity (92.8% similar) in 166 aa overlap (23-188:64-229)

                       10        20        30        40        50  
pF1KB7         MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMK
                                     ..:::::::::.:::::::. ::: :::::
CCDS14 IHLVNLSPFWKVGREPASSIKALLCGRGEARAFDDIAKYFSEKEWEKMKASEKIIYVYMK
            40        50        60        70        80        90   

             60        70        80        90       100       110  
pF1KB7 RKYEAMTKLGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIM
       :::::::::::::::::::.:  ..:.:::::::: :.:::::.::::: ::: ::::: 
CCDS14 RKYEAMTKLGFKATLPPFMRNKRVADFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKIT
           100       110       120       130       140       150   

            120       130       140       150       160       170  
pF1KB7 PKKPAEEGNDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERK
       :.::::::::::::::::: ::.::.: : :: .::::.::::::::::::::::.::::
CCDS14 PEKPAEEGNDSKGVPEASGPQNNGKQLRPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERK
           160       170       180       190       200       210   

            180        
pF1KB7 QLVIYEEISDPEEDDE
       :::::::::::.::::
CCDS14 QLVIYEEISDPQEDDE
           220         

>>CCDS14345.2 SSX2 gene_id:6757|Hs108|chrX                (223 aa)
 initn: 907 init1: 881 opt: 883  Z-score: 855.0  bits: 165.1 E(32554): 2.7e-41
Smith-Waterman score: 883; 78.4% identity (89.2% similar) in 167 aa overlap (1-167:1-167)

               10        20        30        40        50        60
pF1KB7 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK
       ::::::::::: .::::::::::.::::::::::.::::::. ::: :::::::::::::
CCDS14 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG
       ::::::::::: :  : :.::::.::: :.::::::::::: ::: : ::::::::::::
CCDS14 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI
       :::. :::::: :::::.:::::::.:::::.. :: .....   .:             
CCDS14 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGNREAQEKEERRGTAHRWSSQNTHN
              130       140       150       160       170       180

                                                  
pF1KB7 SDPEEDDE                                   
                                                  
CCDS14 IGRFSLSTSMGAVHGTPKTITHNRDPKGGNMPGPTDCVRENSW
              190       200       210       220   




188 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 06:52:55 2016 done: Fri Nov  4 06:52:55 2016
 Total Scan time:  2.140 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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