GENSCAN 1.0	Date run:  4-Nov-116	Time: 06:49:09

Sequence gi568815593f:147964045_148233888 : 269844 bp : 35.97% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    707    702    6                               1.05
 1.03 Term -  18225  18011  215  1  2   95   42    82 0.481   0.71
 1.02 Intr -  21789  21680  110  2  2   74   66    73 0.365   2.71
 1.01 Init -  32957  32875   83  2  2   43   48   119 0.470   3.89
 1.00 Prom -  33016  32977   40                              -3.05

 2.00 Prom +  37049  37088   40                              -6.45
 2.01 Init +  41267  41321   55  1  1   33   99    44 0.237   1.50
 2.02 Intr +  41826  41932  107  1  2   49   60   104 0.768   2.71
 2.03 Term +  42085  42165   81  0  0  131   55    76 0.814   5.31
 2.04 PlyA +  42506  42511    6                               1.05

 3.00 Prom +  43712  43751   40                              -6.75
 3.01 Init +  45076  45171   96  0  0   96   72    25 0.619   2.23
 3.02 Intr +  47563  47680  118  0  1   89   99    71 0.797   7.42
 3.03 Intr +  58382  60483 2102  0  2   34   53   755 0.001  52.97
 3.04 Intr +  70102  70206  105  0  0   76   84    51 0.005   2.99
 3.05 Term +  92019  92120  102  2  0   56   52   128 0.304   3.30
 3.06 PlyA +  93336  93341    6                               1.05

 4.00 Prom +  96256  96295   40                              -4.55
 4.01 Init + 107811 107869   59  2  2   65   61    77 0.539   3.53
 4.02 Intr + 108104 108176   73  2  1  118   78    45 0.561   4.99
 4.03 Intr + 122361 122488  128  2  2  108   66    57 0.921   4.06
 4.04 Intr + 124498 124561   64  1  1   87   94    52 0.873   3.50
 4.05 Intr + 125450 125577  128  1  2  104   81   123 0.974  11.76
 4.06 Intr + 127121 127184   64  2  1   96   93   115 0.996  10.60
 4.07 Intr + 130310 130437  128  1  2   49   59   109 0.929   2.66
 4.08 Intr + 135190 135271   82  1  1   90   73    59 0.952   3.32
 4.09 Intr + 136410 136537  128  2  2   89   70   104 0.989   7.26
 4.10 Intr + 137311 137392   82  1  1   63  105    58 0.913   3.72
 4.11 Intr + 137737 137864  128  0  2   79   70    89 0.854   4.76
 4.12 Intr + 140908 140956   49  1  1   44   85    61 0.827  -0.84
 4.13 Intr + 142643 142663   21  1  0  103  115    12 0.810   2.22
 4.14 Intr + 142993 143120  128  0  2   67   62   162 0.982  10.06
 4.15 Intr + 144709 144793   85  1  1  100   68   123 0.999  10.40
 4.16 Intr + 147724 147851  128  0  2   85   70   151 0.976  11.56
 4.17 Intr + 148824 148890   67  0  1   82   62    59 0.977   0.69
 4.18 Intr + 150318 150445  128  2  2  125   70   126 0.979  13.06
 4.19 Intr + 152326 152422   97  1  1   78   94   109 0.986   9.59
 4.20 Intr + 154393 154520  128  0  2  120   87   179 0.999  19.56
 4.21 Intr + 154942 155014   73  1  1  103  113    30 0.520   5.49
 4.22 Intr + 155965 156092  128  0  2   81   74   109 0.536   7.36
 4.23 Intr + 156251 156347   97  2  1  104   75    41 0.842   3.49
 4.24 Intr + 159789 159920  132  2  0   67   18   121 0.374   2.92
 4.25 Intr + 161480 161569   90  1  0   77   79    52 0.647   2.47
 4.26 Intr + 161679 161806  128  2  2  122   70    69 0.996   7.06
 4.27 Intr + 162939 163035   97  0  1   97   95    86 0.999   9.29
 4.28 Intr + 163836 163853   18  2  0  126  101    26 0.923   3.59
 4.29 Intr + 167215 167345  131  0  2   94   95    63 0.995   6.17
 4.30 Intr + 169753 169843   91  1  1   82   84    81 0.961   6.18
 4.31 Term + 175458 175571  114  2  0   75   42    67 0.342  -1.61
 4.32 PlyA + 175628 175633    6                               1.05

 5.02 PlyA - 176723 176718    6                               1.05
 5.01 Sngl - 190530 190060  471  0  0   66   40   221 0.502  10.97
 5.00 Prom - 194036 193997   40                              -7.15

 6.04 PlyA - 195059 195054    6                               1.05
 6.03 Term - 198224 198091  134  0  2   78   38   109 0.192   2.17
 6.02 Intr - 257716 257594  123  2  0   69   82    75 0.256   4.64
 6.01 Init - 266744 266552  193  2  1   68   67   184 0.505  11.48

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  58450  60615 2166  0  0   44   42   763 0.827  61.11
S.002 Sngl + 267463 267756  294  0  0   88   54   228 0.915  14.85


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:147964045_148233888|GENSCAN_predicted_peptide_1|135_aa
MNTSVEEDTSGWSSRASWQKSTQTATSSSVLVIHPLLSDVVPSALAHRILCAMGIFQSAP
VSTLGPECNLYSSSDPHLRLETGLYYHNTNRGCPHSGPKPGDQEQARSKLKGAAEGTLNL
CFPRPTLMMDGGQVI

>gi568815593f:147964045_148233888|GENSCAN_predicted_CDS_1|408_bp
atgaacacatccgtagaagaagatacaagcggctggtcgtcgagagccagctggcagaag
agcacgcagacagccaccagtagctctgtgctcgtcatccacccattgctttctgatgtt
gtgccatctgctttagctcaccgcattctctgtgccatgggaatcttccaatcagctcct
gtgagtactctcgggccagaatgcaatctctattcctcaagtgatcctcatttgagattg
gagactggattgtattatcacaatactaacagaggctgccctcattcaggccctaagcca
ggagatcaagagcaagcaagatccaaactcaaaggagctgctgaaggaacactaaatctc
tgctttcccaggcccaccctcatgatggatggaggccaggttatttga

>gi568815593f:147964045_148233888|GENSCAN_predicted_peptide_2|80_aa
MDLRGPEADDMEVKRHSTDASSKLEGVNFPNLKLVGLGLGSGEANTEAQHAGNRDIKLQA
VMQLEPLTMAPSGRNAYIGL

>gi568815593f:147964045_148233888|GENSCAN_predicted_CDS_2|243_bp
atggatctgaggggtccagaggcagatgatatggaggttaaaaggcacagcacagatgca
tcctccaaactggaaggagttaatttcccaaaccttaaactggttggtttaggattgggc
tcaggggaagcgaacacagaagcccaacatgccggcaacagggacatcaaactccaagca
gtcatgcaactggagcctctgacgatggctccttctggcaggaacgcttacataggcctc
tga

>gi568815593f:147964045_148233888|GENSCAN_predicted_peptide_3|840_aa
MGETTPMIQSPPTWSLPRHVGIMGITIRDEIWPCASREAGLTRSSRLDLSDVREILLTLP
VISLELPKLNTGAPRFIKQVLSDLQRDLDSHTLIMGDFNTPLSTLDRSMRQKVNKDTQEL
NSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSKIDHIVGSKALLSKCKRTQIITNYLS
DHSAIKLELRIKNLTQNRSTTWKLNNLLLNDYWVHNEMKAEIKMFFETNENKDTTYQNLW
DAFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELEKQEQTHSKASRRQEITKIRAELK
EIETQKTLQKINESRSWFFERINKIDRPLARLIKKKREKNQIDAIKNDKGDITTDPTEIQ
TTIREYYKYLYTNKLENLEEMDKFLDTYTLQRLNQEEVESLNRPITGSEIVAIINSLPTK
KSPGPDGFTAESYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKE
NFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINR
AKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKL
EAFPLKTGTRQGCPLSPLLFNIVLEVLARGIRQEKEIKGIQLGKEEVKLSLFADDMIVYL
ENPIVSAQNVLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKY
LRIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPRNKLNSVTL
LSSDPQPPGPQTGIGPWPARNWAAQQRPCVEDTPVAEGGHGLGYGFRGCKPEALTASTWC

>gi568815593f:147964045_148233888|GENSCAN_predicted_CDS_3|2523_bp
atgggggaaaccacccccatgatccaatcacctcccacctggtccctccctcgacatgtg
gggattatggggattacaattcgagatgagatttggccctgtgcttccagagaagctggt
cttaccagaagctccaggctggacctgagtgatgtgagggaaattctactgactttgcca
gtgattagcttagaattacctaaactcaacacaggagcacccagattcataaagcaagtc
ctgagtgacctacaaagagacttagactcccacacattaataatgggagactttaacacc
ccactgtcaacattagacagatcaatgagacagaaagtcaacaaggatacccaggaattg
aactcagctctgcaccaagcagacctaatagacatctacagaactctccaccccaaatca
acagaatatacatttttttcagcaccacaccacacctattccaaaattgaccacatagtt
ggaagtaaagctctcctcagcaaatgtaaaagaacacaaattataacaaactatctctca
gaccacagtgcaatcaaactagaactcaggattaagaatctcactcaaaaccgctcaaca
acatggaaactgaacaacctgctcctgaatgactactgggtacataacgaaatgaaggca
gaaataaagatgttctttgaaaccaacgagaacaaagacacaacataccagaatctctgg
gacgcattcaaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaag
caggaaagatccaaaattgacaccctaacatcacaattaaaagaactagaaaagcaagag
caaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagcagaactgaag
gaaatagagacacaaaaaacccttcaaaaaattaatgaatccaggagctggttttttgaa
aggatcaacaaaattgatagaccgctagcaagactaataaagaaaaaaagagagaagaat
caaatagacgcaataaaaaatgataaaggggatatcaccaccgatcccacagaaatacaa
actaccatcagagaatactacaaatacctctacacaaataaactagaaaatctagaagaa
atggataaattcctcgacacatacaccctccaaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggatctgaaattgtggcaataatcaatagcttaccaaccaaa
aagagtccaggaccagatggattcacagccgaatcctaccagaggtacaaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcattctgataccaaagccgggcagagacacaaccaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaatatacgcaaatcaataaatgtaatccagcatataaacaga
gccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacaacccttcatgctaaaaactctcaataaattaggtattgatgggacatatttcaaa
ataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattc
aacatagtgttggaagttctggccaggggaattaggcaggagaaggaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatcta
gaaaaccccattgtctcagcccaaaatgtccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaacaacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatac
ctaagaatccagcttacaagggatgtgaaggacctcttcaaggagaactacaaaccactg
ctcaaggaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtagga
agaatcaatatcgtgaaaatggccatactgcccaggaataaactaaatagtgtaacactt
ttgagcagtgatccccaacccccggggccacagactggtattggcccatggcctgctagg
aactgggctgcacagcagaggccctgcgttgaagacactccagtggctgaagggggccat
ggcttgggctatggcttccgagggtgcaagcctgaagccttgacagcttccacatggtgt
tga

>gi568815593f:147964045_148233888|GENSCAN_predicted_peptide_4|997_aa
MVQIALRVGDHLAVGSIPGREKEAKSQKRARHLARAPKATAPTELNCDDFKKGERDGDFI
CPDYYEAVCGTDGKTYDNRCALCAENAKTGSQIGVKSEGECKSSNPEQDVCSAFRPFVRD
GRLGCTRENDPVLGPDGKTHGNKCAMCAELFLKEAENAKREGETRIRRNAEKDFCKEYEK
QVRNGRLFCTRESDPVRGPDGRMHGNKCALCAEIFQAENEEKKKAEARARNKRESGKATS
YAELCSEYRKLVRNGKLACTRENDPIQGPDGKVHGNTCSMCEVFFQAEEEEKKKKEGKSR
NKRQSKSTASFEELCSEYRKSRKNGRLFCTRENDPIQGPDGKMHGNTCSMCEAFFQQEER
ARAKAKREAAKTPKDKSQEICSEFRDQVRNGTLICTREHNPVRGPDGKMHGNKCAMCASV
FKLEEEEKKNDKEEKGKVEAEKVKREAVQELCSEYRHYVRNGRLPCTRENDPIEGLDGKI
HGNTCSMCEAFFQQEAKEKERAEPRAKVKREAEKETCDEFRRLLQNGKLFCTRENDPVRG
PDGKTHGNKCAMCKAVFQKENEERKRKEEEDQRNAAGHGSSGGGGGNTQDECAEYREQMK
NGRLSCTRESDPVRDADGKSYNNQCTMCKAKLEREAERKNEYSRSRSNGTGSESGKDTCD
EFRSQMKNGKLICTRESDPVRGPDGKTHGNKCTMCKEKLEREAAEKKKKEDEDRSNTGER
SNTGERSNDKEDLCREFRSMQRNGKLICTRENNPVRGPYGKMHINKCAMCQSILYDQCRQ
VQNEAEDAKFRQPGRSLASVARMSTDECSEFRNYIRNNELICPRENDPVHGADGKFYTNK
CYMCRAVFLTEALERAKLQEKPSHVRASQEEDSPDSFSSLLMVTSNDSEMCKDYRVLPRI
GYLCPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCEESSTPGTTAASMPPS
ASEMPKDVEKRARLHTLDENINYFKLCGKQYVDISKN

>gi568815593f:147964045_148233888|GENSCAN_predicted_CDS_4|2994_bp
atggtgcagatagctttgagagttggtgaccacctggctgttggaagtattccaggaagg
gaaaaagaagcaaaatcacagaagagggccaggcatttagcaagagctcccaaggctact
gccccaacagagctgaattgtgatgattttaaaaaaggagaaagagatggggattttatc
tgtcctgattattatgaagctgtttgtggcacagatgggaaaacatatgacaacagatgt
gcactgtgtgctgagaatgcgaaaaccgggtcccaaattggtgtaaaaagtgaaggggaa
tgtaagagcagtaatccagagcaggatgtatgcagtgcttttcggccctttgttagagat
ggaagacttggatgcacaagggaaaatgatcctgttcttggtcctgatgggaagacgcat
ggcaataagtgtgcaatgtgtgctgagctgtttttaaaagaagctgaaaatgccaagcga
gagggtgaaactagaattcgacgaaatgctgaaaaggatttttgcaaggaatatgaaaaa
caagtgagaaatggaaggcttttttgtacacgggagagtgatccagtccgtggccctgac
ggcaggatgcatggcaacaaatgtgccctgtgtgctgaaattttccaagcagaaaatgaa
gaaaagaaaaaggctgaagcacgagctagaaacaaaagagaatctggaaaagcaacctca
tatgcagagctttgcagtgaatatcgaaagcttgtgaggaacggaaaacttgcttgcacc
agagagaacgatcctatccagggcccagatgggaaagtgcatggcaacacctgctccatg
tgtgaggtcttcttccaagcagaagaagaagaaaagaaaaagaaggaaggtaaatcaaga
aacaaaagacaatctaagagtacagcttcctttgaggagttgtgtagtgaataccgcaaa
tccaggaaaaacggacggcttttttgcaccagagagaatgaccccatccagggcccagat
ggaaaaatgcatggcaacacctgctccatgtgtgaggccttctttcaacaagaagaaaga
gcaagagcaaaggctaaaagagaagctgcaaagacccctaaagacaaatcacaggaaatc
tgcagtgaatttcgggaccaagtgaggaatggaacacttatatgcaccagggagcataat
cctgtccgtggcccagatggcaaaatgcatggaaacaagtgtgccatgtgtgccagtgtg
ttcaaacttgaagaagaagagaagaaaaatgataaagaagaaaaagggaaagtcgaggct
gaaaaagttaagagagaagcagttcaggagctgtgcagtgaatatcgtcattatgtgagg
aatggacgactcccctgtaccagagagaatgatcctattgagggtctagatgggaaaatc
cacggcaacacctgctccatgtgtgaagccttcttccagcaagaagcaaaagaaaaagaa
agagctgaacccagagcaaaagtcaaaagagaagctgaaaaggagacatgcgatgaattt
cggagacttttgcaaaatggaaaacttttctgcacaagagaaaatgatcctgtgcgtggc
ccagatggcaagacccatggcaacaagtgtgccatgtgtaaggcagtcttccagaaagaa
aatgaggaaagaaagaggaaagaagaggaagatcagagaaatgctgcaggacatggttcc
agtggtggtggaggaggaaacactcaggacgaatgtgctgagtatcgggaacaaatgaaa
aatggaagactcagctgtactcgggagagtgatcctgtacgtgatgctgatggcaaatcg
tacaacaatcagtgtaccatgtgtaaagcaaaattggaaagagaagcagagagaaaaaat
gagtattctcgctccagatcaaatgggactggatcagaatcagggaaggatacatgtgat
gagtttagaagccaaatgaaaaatggaaaactcatctgcactcgagaaagtgaccctgtc
cggggtccagatggcaagacacatggcaataagtgtactatgtgtaaggaaaaactggaa
agggaagcagctgaaaaaaaaaagaaagaggatgaagacaggagcaatacaggagaaagg
agcaatacaggagaaaggagcaatgacaaagaggatctgtgtcgtgaatttcgaagcatg
cagagaaatggaaagcttatctgcaccagagaaaataaccctgttcgaggcccatatggc
aagatgcacatcaataaatgtgctatgtgtcagagcatcttgtacgaccagtgcagacag
gttcagaatgaagcggaggatgcaaaatttagacaacctgggcgttccttggcctctgtt
gccaggatgagtacagatgagtgcagtgaatttcgaaactatataaggaacaatgaactc
atctgccctagagagaatgacccagtgcacggtgctgatggaaagttctatacaaacaag
tgctacatgtgcagagctgtctttctaacagaagctttggaaagggcaaagcttcaagaa
aagccatcccatgttagagcttctcaagaggaagacagcccagactctttcagttctctg
ctgatggtcaccagtaatgattctgagatgtgcaaagactaccgagtattgcccaggata
ggttatctttgtccaaaggatttaaagcctgtctgtggtgacgatggccaaacctacaac
aatccttgcatgctctgtcatgaaaacctgatacgccaaacaaatacacacatccgcagt
acagggaagtgtgaggagagcagcaccccaggaaccaccgcagccagcatgcccccgtct
gcttcagaaatgcctaaggatgtggagaaaagagcacgtttacatactttagatgaaaat
ataaattattttaaactctgtggaaaacagtacgtagacatctcaaaaaactaa

>gi568815593f:147964045_148233888|GENSCAN_predicted_peptide_5|156_aa
MVLGDTNKAMWGMAVDPGETAVAEGIRQAGACLQRLLCWSGAVCQCKSYDEGRQGTKACT
ANRYSKAGTPREASRLIGAQVRLALSDEQDLPAEFRSGSSPRAKVSYRRKLSLGGWASLD
KLHYRCSHTKPSGLYTKWSASPNTSLSSSSCQLKCP

>gi568815593f:147964045_148233888|GENSCAN_predicted_CDS_5|471_bp
atggtgctaggggatacgaataaggcaatgtggggtatggctgtggaccctggggaaact
gcagtggcagaagggatcaggcaggctggtgcatgtctacagagactgctctgctggtca
ggtgcagtctgccagtgcaagagctatgatgagggtcgccagggcaccaaagcctgcact
gcaaacagatacagcaaggctgggaccccaagagaggccagcagactaataggtgctcag
gtcagactggccctgtctgatgagcaagacctccctgcagagtttaggtctggcagttcc
cccagggctaaagtctcctacagaagaaagttgagcctagggggatgggcatccctggac
aagctccactacagatgctcccacaccaaaccctctgggctctacaccaaatggagtgct
tctcctaatacttcactaagcagctcttcctgccaactcaagtgtccatag

>gi568815593f:147964045_148233888|GENSCAN_predicted_peptide_6|149_aa
MPLPASARARCADPLTCAHCLALPSEMNLVPQMEMQKSPVFCVNHAGSCRPELFLFGHLG
SAKIVPSSAGGVAVAGQLSFTKAFGALGAAGTQHLSSQRQRCLKEVSLSVSVSLCYSPLR
RLSTKAEIVLDITVSIEPGTRSDNSGGKY

>gi568815593f:147964045_148233888|GENSCAN_predicted_CDS_6|450_bp
atgcctctccctgcttcggctcgtgcacggtgcgcggacccactgacctgcgcccactgt
ctggcacttcctagtgagatgaacctggtacctcagatggaaatgcagaaatcacccgtc
ttctgcgtcaatcacgctgggagctgcagaccggagctgttcctattcggccatcttggc
tccgccaaaatagttccttcgtctgcaggaggagtggcagtggccgggcagctcagcttc
accaaggcttttggtgcgctgggagctgcaggcacccagcacttgtcctcccaaaggcaa
agatgcctaaaagaagtctccctgtctgtttctgtgtctctatgttactcacccctaaga
aggctatccacaaaggcagaaattgtcctggacatcactgtatccatagaacctggtaca
agatctgacaacagtggtggcaaatactaa