FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7270, 213 aa 1>>>pF1KB7270 213 - 213 aa - 213 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.7821+/-0.000721; mu= 3.2687+/- 0.044 mean_var=129.0272+/-25.520, 0's: 0 Z-trim(113.6): 11 B-trim: 8 in 1/54 Lambda= 0.112910 statistics sampled from 14229 (14237) to 14229 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.784), E-opt: 0.2 (0.437), width: 16 Scan time: 1.740 The best scores are: opt bits E(32554) CCDS6642.1 ZFAND5 gene_id:7763|Hs108|chr9 ( 213) 1457 247.5 4.6e-66 CCDS10313.1 ZFAND6 gene_id:54469|Hs108|chr15 ( 208) 783 137.7 5.1e-33 CCDS58395.1 ZFAND6 gene_id:54469|Hs108|chr15 ( 196) 484 89.0 2.2e-18 >>CCDS6642.1 ZFAND5 gene_id:7763|Hs108|chr9 (213 aa) initn: 1457 init1: 1457 opt: 1457 Z-score: 1299.5 bits: 247.5 E(32554): 4.6e-66 Smith-Waterman score: 1457; 100.0% identity (100.0% similar) in 213 aa overlap (1-213:1-213) 10 20 30 40 50 60 pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY 130 140 150 160 170 180 190 200 210 pF1KB7 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI ::::::::::::::::::::::::::::::::: CCDS66 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 190 200 210 >>CCDS10313.1 ZFAND6 gene_id:54469|Hs108|chr15 (208 aa) initn: 830 init1: 415 opt: 783 Z-score: 706.3 bits: 137.7 E(32554): 5.1e-33 Smith-Waterman score: 783; 58.5% identity (76.5% similar) in 217 aa overlap (1-213:1-208) 10 20 30 40 50 pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS-GRMSPMGTASGSNSP ::::::.. :::::::::::::::::::::::::::::::..: ::.:: .: : : CCDS10 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAT---SVSS 10 20 30 40 50 60 70 80 90 100 110 pF1KB7 TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSI--SREDKITTPKT :.: :: .: :. . ..: ::: . . ::. .:.. :. :. :. .. :. CCDS10 LSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVS----NQSLLSESVASSQLDSTSVDKA 60 70 80 90 100 110 120 130 140 150 160 170 pF1KB7 -EVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCG .: : .. : ...::: :: :. : :: :::::::::::::::::.:::::..:: CCDS10 VPETEDVQASVSDTAQQPSEEQS--KSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCG 120 130 140 150 160 170 180 190 200 210 pF1KB7 LHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI .::::: ::: :.:::.:: ::::::::::.::::.: CCDS10 VHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 180 190 200 >>CCDS58395.1 ZFAND6 gene_id:54469|Hs108|chr15 (196 aa) initn: 804 init1: 415 opt: 484 Z-score: 443.5 bits: 89.0 E(32554): 2.2e-18 Smith-Waterman score: 743; 56.7% identity (73.7% similar) in 217 aa overlap (1-213:1-196) 10 20 30 40 50 pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS-GRMSPMGTASGSNSP ::::::.. :::::::::::::::::::::::::::::::..: ::.:: : CCDS58 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISP---------P 10 20 30 40 50 60 70 80 90 100 110 pF1KB7 TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSI--SREDKITTPKT :: .: :. . ..: ::: . . ::. .:.. :. :. :. .. :. CCDS58 ------VQCTDGSVPEAQSALDSTSSSMQPSPVS----NQSLLSESVASSQLDSTSVDKA 60 70 80 90 100 120 130 140 150 160 170 pF1KB7 -EVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCG .: : .. : ...::: :: :. : :: :::::::::::::::::.:::::..:: CCDS58 VPETEDVQASVSDTAQQPSEEQS--KSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCG 110 120 130 140 150 180 190 200 210 pF1KB7 LHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI .::::: ::: :.:::.:: ::::::::::.::::.: CCDS58 VHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 160 170 180 190 213 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 06:31:13 2016 done: Fri Nov 4 06:31:14 2016 Total Scan time: 1.740 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]