Result of FASTA (ccds) for pF1KB7262
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7262, 451 aa
  1>>>pF1KB7262 451 - 451 aa - 451 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.7513+/-0.000794; mu= 13.8239+/- 0.048
 mean_var=154.0546+/-29.737, 0's: 0 Z-trim(115.4): 40  B-trim: 99 in 2/49
 Lambda= 0.103332
 statistics sampled from 15897 (15937) to 15897 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.806), E-opt: 0.2 (0.49), width:  16
 Scan time:  3.620

The best scores are:                                      opt bits E(32554)
CCDS8234.1 CHRDL2 gene_id:25884|Hs108|chr11        ( 451) 3335 508.5 5.8e-144
CCDS60893.1 CHRDL2 gene_id:25884|Hs108|chr11       ( 429) 2790 427.2 1.6e-119
CCDS14553.1 CHRDL1 gene_id:91851|Hs108|chrX        ( 456) 1107 176.3 5.6e-44
CCDS48150.1 CHRDL1 gene_id:91851|Hs108|chrX        ( 457) 1105 176.0 6.9e-44
CCDS48149.1 CHRDL1 gene_id:91851|Hs108|chrX        ( 458) 1099 175.1 1.3e-43
CCDS48148.2 CHRDL1 gene_id:91851|Hs108|chrX        ( 378)  578 97.4 2.7e-20


>>CCDS8234.1 CHRDL2 gene_id:25884|Hs108|chr11             (451 aa)
 initn: 3335 init1: 3335 opt: 3335  Z-score: 2698.1  bits: 508.5 E(32554): 5.8e-144
Smith-Waterman score: 3335; 100.0% identity (100.0% similar) in 451 aa overlap (1-451:1-451)

               10        20        30        40        50        60
pF1KB7 MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCLR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 CTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQH
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 GEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEASE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 GEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEASE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 QSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIPRHFRPKGAGSTTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 QSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIPRHFRPKGAGSTTV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 KIVLKEKHKKACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQRVTCPTEYPC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 KIVLKEKHKKACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQRVTCPTEYPC
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 RHPEKVAGKCCKICPEDKADPGHSEISSTRCPKAPGRVLVHTSVSPSPDNLRRFALEHEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 RHPEKVAGKCCKICPEDKADPGHSEISSTRCPKAPGRVLVHTSVSPSPDNLRRFALEHEA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 SDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQEARLPERGTALPTARWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 SDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQEARLPERGTALPTARWP
              370       380       390       400       410       420

              430       440       450 
pF1KB7 PRRSLERLPSPDPGAEGHGQSRQSDQDITKT
       :::::::::::::::::::::::::::::::
CCDS82 PRRSLERLPSPDPGAEGHGQSRQSDQDITKT
              430       440       450 

>>CCDS60893.1 CHRDL2 gene_id:25884|Hs108|chr11            (429 aa)
 initn: 2790 init1: 2790 opt: 2790  Z-score: 2259.3  bits: 427.2 E(32554): 1.6e-119
Smith-Waterman score: 2790; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373)

               10        20        30        40        50        60
pF1KB7 MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCLR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 CTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQH
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 GEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEASE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 GEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEASE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 QSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIPRHFRPKGAGSTTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 QSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIPRHFRPKGAGSTTV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 KIVLKEKHKKACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQRVTCPTEYPC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 KIVLKEKHKKACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQRVTCPTEYPC
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 RHPEKVAGKCCKICPEDKADPGHSEISSTRCPKAPGRVLVHTSVSPSPDNLRRFALEHEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 RHPEKVAGKCCKICPEDKADPGHSEISSTRCPKAPGRVLVHTSVSPSPDNLRRFALEHEA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 SDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQEARLPERGTALPTARWP
       :::::::::::::                                               
CCDS60 SDLVEIYLWKLVKGIFHLTQIKKVRKQDFQKEAQHFRLLAGPHEGHWNVFLAQTLELKVT
              370       380       390       400       410       420

>>CCDS14553.1 CHRDL1 gene_id:91851|Hs108|chrX             (456 aa)
 initn: 1003 init1: 626 opt: 1107  Z-score: 903.0  bits: 176.3 E(32554): 5.6e-44
Smith-Waterman score: 1107; 42.6% identity (68.3% similar) in 357 aa overlap (30-373:34-383)

                10        20        30        40        50         
pF1KB7  MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCL
                                     . .:.:. :.:  :: ::::::: ::.::.
CCDS14 KWKMGGMKYIFSLLFFLLLEGGKTEQVKHSETYCMFQDKKYRVGERWHPYLEPYGLVYCV
            10        20        30        40        50        60   

      60        70        80        90       100       110         
pF1KB7 RCTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQ
        : :::...: : :..:: ::: .::  :. :::.: .   : . ..  :::..::: ::
CCDS14 NCICSENGNVLCSRVRCPNVHCLSPVHIPHLCCPRCPDSLPPVNNKVTSKSCEYNGTTYQ
            70        80        90       100       110       120   

     120       130       140       150       160       170         
pF1KB7 HGEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEAS
       :::.: :. :: .: ::::. :::.::..:::: :::.  :  :. .:::::..:. .. 
CCDS14 HGELFVAEGLFQNRQPNQCTQCSCSEGNVYCGLKTCPKLTCAFPVSVPDSCCRVCRGDGE
           130       140       150       160       170       180   

     180       190       200       210       220         230       
pF1KB7 EQSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIP--RHFR-----P
        . .. :.       :.: .  .  .  .:.   : :.  .. :: .:  :  :      
CCDS14 LSWEHSDG----DIFRQPANREARHS-YHRSHYDPPPSRQAGGLSRFPGARSHRGALMDS
           190           200        210       220       230        

            240         250       260       270       280       290
pF1KB7 KGAGSTTVKIVLKEKHK--KACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQ
       . :..: :.::...:::  ..:: .:::::::: ::: .:::: . :.::::.  .:.:.
CCDS14 QQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESWHPNLRAFGIVECVLCTCNVTKQECK
      240       250       260       270       280       290        

              300       310       320          330       340       
pF1KB7 RVTCPTEYPCRHPEKVAGKCCKICPEDKAD--PGHS-EISSTRCPKAPGRVLVHTSV-SP
       .. ::..:::..:.:. :::::.::  ::   ::.: . ..  : .    . :. ::   
CCDS14 KIHCPNRYPCKYPQKIDGKCCKVCPGKKAKELPGQSFDNKGYFCGEET--MPVYESVFME
      300       310       320       330       340         350      

        350       360       370       380       390       400      
pF1KB7 SPDNLRRFALEHEASDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQEAR
       . .. :..::: :    ::...: . :                                 
CCDS14 DGETTRKIALETERPPQVEVHVWTIRKGILQHFHIEKISKRMFEELPHFKLVTRTTLSQW
        360       370       380       390       400       410      

>>CCDS48150.1 CHRDL1 gene_id:91851|Hs108|chrX             (457 aa)
 initn: 1003 init1: 626 opt: 1105  Z-score: 901.4  bits: 176.0 E(32554): 6.9e-44
Smith-Waterman score: 1105; 42.5% identity (68.2% similar) in 358 aa overlap (30-373:34-384)

                10        20        30        40        50         
pF1KB7  MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCL
                                     . .:.:. :.:  :: ::::::: ::.::.
CCDS48 KWKMGGMKYIFSLLFFLLLEGGKTEQVKHSETYCMFQDKKYRVGERWHPYLEPYGLVYCV
            10        20        30        40        50        60   

      60        70        80        90       100       110         
pF1KB7 RCTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQ
        : :::...: : :..:: ::: .::  :. :::.: .   : . ..  :::..::: ::
CCDS48 NCICSENGNVLCSRVRCPNVHCLSPVHIPHLCCPRCPDSLPPVNNKVTSKSCEYNGTTYQ
            70        80        90       100       110       120   

     120       130       140       150       160       170         
pF1KB7 HGEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEAS
       :::.: :. :: .: ::::. :::.::..:::: :::.  :  :. .:::::..:. .. 
CCDS48 HGELFVAEGLFQNRQPNQCTQCSCSEGNVYCGLKTCPKLTCAFPVSVPDSCCRVCRGDGE
           130       140       150       160       170       180   

     180       190       200       210       220         230       
pF1KB7 EQSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIP--RHFR-----P
        . .. :.       :.: .  .  .  .:.   : :.  .. :: .:  :  :      
CCDS48 LSWEHSDG----DIFRQPANREARHS-YHRSHYDPPPSRQAGGLSRFPGARSHRGALMDS
           190           200        210       220       230        

            240         250       260       270       280       290
pF1KB7 KGAGSTTVKIVLKEKHK--KACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQ
       . :..: :.::...:::  ..:: .:::::::: ::: .:::: . :.::::.  .:.:.
CCDS48 QQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESWHPNLRAFGIVECVLCTCNVTKQECK
      240       250       260       270       280       290        

              300       310       320           330       340      
pF1KB7 RVTCPTEYPCRHPEKVAGKCCKICPEDKAD---PGHS-EISSTRCPKAPGRVLVHTSV-S
       .. ::..:::..:.:. :::::.::  ::    ::.: . ..  : .    . :. ::  
CCDS48 KIHCPNRYPCKYPQKIDGKCCKVCPGKKAKEELPGQSFDNKGYFCGEET--MPVYESVFM
      300       310       320       330       340         350      

         350       360       370       380       390       400     
pF1KB7 PSPDNLRRFALEHEASDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQEA
        . .. :..::: :    ::...: . :                                
CCDS48 EDGETTRKIALETERPPQVEVHVWTIRKGILQHFHIEKISKRMFEELPHFKLVTRTTLSQ
        360       370       380       390       400       410      

>>CCDS48149.1 CHRDL1 gene_id:91851|Hs108|chrX             (458 aa)
 initn: 1042 init1: 391 opt: 1099  Z-score: 896.5  bits: 175.1 E(32554): 1.3e-43
Smith-Waterman score: 1100; 42.6% identity (68.0% similar) in 359 aa overlap (30-373:34-385)

                10        20        30        40        50         
pF1KB7  MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCL
                                     . .:.:. :.:  :: ::::::: ::.::.
CCDS48 KWKMGGMKYIFSLLFFLLLEGGKTEQVKHSETYCMFQDKKYRVGERWHPYLEPYGLVYCV
            10        20        30        40        50        60   

      60        70        80        90       100        110        
pF1KB7 RCTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPS-GLRAPPKSCQHNGTMY
        : :::...: : :..:: ::: .::  :. :::.: :   :  . ..  :::..::: :
CCDS48 NCICSENGNVLCSRVRCPNVHCLSPVHIPHLCCPRCPEDSLPPVNNKVTSKSCEYNGTTY
            70        80        90       100       110       120   

      120       130       140       150       160       170        
pF1KB7 QHGEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEA
       ::::.: :. :: .: ::::. :::.::..:::: :::.  :  :. .:::::..:. ..
CCDS48 QHGELFVAEGLFQNRQPNQCTQCSCSEGNVYCGLKTCPKLTCAFPVSVPDSCCRVCRGDG
           130       140       150       160       170       180   

      180       190       200       210       220         230      
pF1KB7 SEQSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIP--RHFR-----
         . .. :.       :.: .  .  .  .:.   : :.  .. :: .:  :  :     
CCDS48 ELSWEHSDG----DIFRQPANREARHS-YHRSHYDPPPSRQAGGLSRFPGARSHRGALMD
           190           200        210       220       230        

             240         250       260       270       280         
pF1KB7 PKGAGSTTVKIVLKEKHK--KACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDC
        . :..: :.::...:::  ..:: .:::::::: ::: .:::: . :.::::.  .:.:
CCDS48 SQQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESWHPNLRAFGIVECVLCTCNVTKQEC
      240       250       260       270       280       290        

     290       300       310       320           330       340     
pF1KB7 QRVTCPTEYPCRHPEKVAGKCCKICPEDKAD---PGHS-EISSTRCPKAPGRVLVHTSV-
       ... ::..:::..:.:. :::::.::  ::    ::.: . ..  : .    . :. :: 
CCDS48 KKIHCPNRYPCKYPQKIDGKCCKVCPGKKAKEELPGQSFDNKGYFCGEET--MPVYESVF
      300       310       320       330       340         350      

          350       360       370       380       390       400    
pF1KB7 SPSPDNLRRFALEHEASDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQE
         . .. :..::: :    ::...: . :                               
CCDS48 MEDGETTRKIALETERPPQVEVHVWTIRKGILQHFHIEKISKRMFEELPHFKLVTRTTLS
        360       370       380       390       400       410      

>>CCDS48148.2 CHRDL1 gene_id:91851|Hs108|chrX             (378 aa)
 initn: 703 init1: 391 opt: 578  Z-score: 477.8  bits: 97.4 E(32554): 2.7e-20
Smith-Waterman score: 661; 33.0% identity (55.3% similar) in 351 aa overlap (30-373:34-305)

                10        20        30        40        50         
pF1KB7  MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCL
                                     . .:.:. :.:  :: ::::::: ::.::.
CCDS48 KWKMGGMKYIFSLLFFLLLEGGKTEQVKHSETYCMFQDKKYRVGERWHPYLEPYGLVYCV
            10        20        30        40        50        60   

      60        70        80        90       100       110         
pF1KB7 RCTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQ
        : :::...: : :..:: ::: .::  :. :::.:     :.                 
CCDS48 NCICSENGNVLCSRVRCPNVHCLSPVHIPHLCCPRC-----PGD----------------
            70        80        90            100                  

     120       130       140       150       160       170         
pF1KB7 HGEIFSAHELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKDEAS
        ::.   :                ..:.:.                              
CCDS48 -GELSWEH----------------SDGDIF------------------------------
                             110                                   

     180       190       200       210       220       230         
pF1KB7 EQSDEEDSVQSLHGVRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIPRHFRPKGAGSTT
       .:  .... .: :  ..   :  . .: .: ::. .  :  : ..        . :..: 
CCDS48 RQPANREARHSYHRSHYDPPPSRQAGGLSRFPGARSHRG--ALMD-------SQQASGTI
         120       130       140       150                160      

     240         250       260       270       280       290       
pF1KB7 VKIVLKEKHK--KACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQRVTCPTE
       :.::...:::  ..:: .:::::::: ::: .:::: . :.::::.  .:.:... ::..
CCDS48 VQIVINNKHKHGQVCVSNGKTYSHGESWHPNLRAFGIVECVLCTCNVTKQECKKIHCPNR
        170       180       190       200       210       220      

       300       310       320           330       340        350  
pF1KB7 YPCRHPEKVAGKCCKICPEDKAD---PGHS-EISSTRCPKAPGRVLVHTSV-SPSPDNLR
       :::..:.:. :::::.::  ::    ::.: . ..  : .    . :. ::   . .. :
CCDS48 YPCKYPQKIDGKCCKVCPGKKAKEELPGQSFDNKGYFCGEET--MPVYESVFMEDGETTR
        230       240       250       260         270       280    

            360       370       380       390       400       410  
pF1KB7 RFALEHEASDLVEIYLWKLVKDEETEAQRGEVPGPRPHSQNLPLDSDQESQEARLPERGT
       ..::: :    ::...: . :                                       
CCDS48 KIALETERPPQVEVHVWTIRKGILQHFHIEKISKRMFEELPHFKLVTRTTLSQWKIFTEG
          290       300       310       320       330       340    




451 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 06:26:41 2016 done: Fri Nov  4 06:26:41 2016
 Total Scan time:  3.620 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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