GENSCAN 1.0	Date run:  4-Nov-116	Time: 06:27:03

Sequence gi568815587r:74596501_74830888 : 234388 bp : 43.23% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6147   6184   38  2  2   94  100    29 0.687   1.76
 1.02 Intr +   8192   8294  103  2  1   69   94    48 0.844   3.68
 1.03 Intr +  14999  15038   40  1  1   70  115    13 0.509  -0.00
 1.04 Intr +  16378  16510  133  2  1   81   82   175 0.861  15.90
 1.05 Intr +  22037  22304  268  2  1  107  101   241 0.987  24.83
 1.06 Intr +  23517  23589   73  2  1   83   54    57 0.745   0.78
 1.07 Intr +  28908  29073  166  1  1   63   97   142 0.612  11.62
 1.08 Intr +  32717  32823  107  2  2   42   86   102 0.880   5.26
 1.09 Intr +  33749  33819   71  0  2   67   89    35 0.695   0.40
 1.10 Intr +  39697  39775   79  0  1   80   82    44 0.589   2.12
 1.11 Intr +  44064  44233  170  1  2   81   37   203 0.201  14.17
 1.12 Intr +  48073  48123   51  0  0   93   87     5 0.048   0.00
 1.13 Intr +  64228  64267   40  0  1  111   87    59 0.739   5.90
 1.14 Intr +  72277  72352   76  2  1   79   75    91 0.115   5.47
 1.15 Intr +  77138  77166   29  2  2   84   96     8 0.141  -1.04
 1.16 Term +  78312  78349   38  1  2  122   37    40 0.276  -0.20
 1.17 PlyA +  78930  78935    6                               1.05

 2.00 Prom +  80134  80173   40                              -2.46
 2.01 Init +  83916  83958   43  2  1   67   84    75 0.729   5.58
 2.02 Intr +  95696  95830  135  0  0   68   87    49 0.620   3.34
 2.03 Intr +  96969  97073  105  1  0   67   86    54 0.413   3.29
 2.04 Term +  97585  97745  161  2  2   76   41    56 0.341  -2.20
 2.05 PlyA +  98597  98602    6                              -0.45

 3.12 PlyA -  99002  98997    6                               1.05
 3.11 Term - 100085 100009   77  0  2  114   42   137 0.977   9.70
 3.10 Intr - 100797 100705   93  1  0  130   97    75 0.994  12.54
 3.09 Intr - 106467 106294  174  1  0   85  113   156 0.993  17.71
 3.08 Intr - 106999 106805  195  2  0   84   86   166 0.999  15.39
 3.07 Intr - 108154 107986  169  1  1  110   81    75 0.789   8.52
 3.06 Intr - 111895 111713  183  1  0   58   61    90 0.569   3.28
 3.05 Intr - 114491 114349  143  0  2   93   61   111 0.974   8.97
 3.04 Intr - 116979 116886   94  0  1  113  106   -23 0.812   1.54
 3.03 Intr - 118783 118622  162  1  0   74   21   132 0.833   5.27
 3.02 Intr - 122332 122220  113  2  2   63   92   113 0.504   9.30
 3.01 Init - 134388 134307   82  0  1   63  105   143 0.853  12.64
 3.00 Prom - 149128 149089   40                              -6.66

 4.02 PlyA - 149212 149207    6                               1.05
 4.01 Sngl - 149614 149216  399  1  0   90   49   388 0.990  31.36
 4.00 Prom - 150853 150814   40                              -8.66

 5.00 Prom + 152061 152100   40                              -9.16
 5.01 Init + 152381 152882  502  1  1   90   49   382 0.534  27.69
 5.02 Term + 156807 156835   29  1  2   85   48     7 0.065  -5.36
 5.03 PlyA + 158327 158332    6                               1.05

 6.03 PlyA - 158482 158477    6                               1.05
 6.02 Term - 159327 159208  120  0  0   79   38    92 0.776   1.77
 6.01 Init - 163568 162393 1176  2  0   70   86   367 0.778  28.15
 6.00 Prom - 164519 164480   40                              -4.96

 7.02 PlyA - 164688 164683    6                               1.05
 7.01 Sngl - 165924 165631  294  0  0   88   54   221 0.751  14.40
 7.00 Prom - 181743 181704   40                              -2.36

 8.00 Prom + 185233 185272   40                              -4.36
 8.01 Init + 194158 194292  135  0  0   93   17   146 0.017   6.15
 8.02 Intr + 213684 213830  147  2  0   63   86   125 0.975  10.23
 8.03 Intr + 221096 221214  119  1  2   74   90    85 0.744   6.56
 8.04 Term + 230782 230899  118  1  1   74   49    40 0.156  -3.29
 8.05 PlyA + 231187 231192    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:74596501_74830888|GENSCAN_predicted_peptide_1|493_aa
YIIHITFSDPSERMLYDYVERKRKENSGAQLHVTYLVSGSLIQNGHSCHKVAVVREDKLE
AVKSKLAVTASIHVYSIQKAMLKDSGPLFNTDYDILKSNLQNCSKFSAIQCAAAVPRAPA
ESSSSSKKFEQSHLHMSSETQANNELTTNGHGPPASKQVSQQPKGIMGMFASKAAAKTQE
TNKETKTEAKEVTNASAAGNKAPGKGNMMSNFFGKAAMNKFKVNLDSEQAVKEEKIVEQP
TVSVTEPKLATPAGLKKSSKKAEPVKVLQKEKKRGKRVALSDDETKETENMRKKRRRIKL
PESDSSEDEETTLRGIENGKRGFRKKDISSTIQSSSGENKRKRKRVLKSKTYLDGEGCIV
TEKVYESESCTDSEEELNMKTSSVHRPPAMTVKKEPREERKGPKKGTAALGKANRQVRTT
HRLPPRLFSQRNLVRCAGFLFTFRHDLVLDMQSHSLDILEHYVEMPIQRLERKPSLTMPS
AVHKDLCDYIGLI

>gi568815587r:74596501_74830888|GENSCAN_predicted_CDS_1|1482_bp
tatatcatccacataaccttctcagatccttctgaaaggatgctgtatgattatgttgaa
aggaaacgaaaagaaaattcaggagcccaactgcatgttacctacttggtgtctggcagt
ctcattcagaatggacattcctgccacaaggttgcagtagtgagagaagataaattggaa
gcagtgaagtccaagctagctgtgactgccagcatccatgtgtacagcatccagaaagcc
atgctaaaggacagtgggcctctgttcaatactgactatgacatccttaaaagcaacttg
cagaactgcagcaaatttagtgctatacaatgtgcagctgccgtccctagagctcctgct
gaatcctcttcgtcttccaaaaagtttgagcagtcacatcttcacatgtcaagtgagaca
caagccaacaatgagctgaccaccaatggtcatggcccacctgcatccaagcaggtttcc
cagcagcccaaaggaattatgggaatgtttgcctccaaagctgctgctaaaacccaagaa
accaacaaggaaacgaaaacagaggctaaagaagtaacaaatgcatctgcagcaggcaac
aaggcaccagggaaagggaatatgatgagcaacttttttggaaaagctgctatgaataaa
tttaaagtcaatttggactcagaacaagcagtgaaagaagaaaaaatagtggagcagcct
acagtgtctgtcacggaaccaaagctggcaactcctgcaggcctgaaaaaatccagcaaa
aaagcagagcctgttaaggtgctgcagaaggaaaaaaaaagggggaagcgagtagcatta
tctgatgatgagacaaaggaaactgaaaacatgaggaaaaagaggagaagaatcaaactt
cctgaatctgatagcagtgaagatgaagaaactactctaagaggaattgaaaatggtaag
agaggcttccgaaaaaaggatattagctcaactatacaaagctcaagtggagaaaacaaa
agaaaacgaaaacgcgtactaaaatctaaaacttacctggatggggaaggctgcatagtg
actgaaaaagtctacgagagtgaatcctgcacagatagtgaagaggagcttaacatgaag
acatcctcagtacacagaccccctgccatgactgtgaaaaaagaacccagagaggaacga
aagggccccaagaaagggactgctgctctgggcaaagccaacagacaggtgcggaccacc
cacagattaccacccaggctctttagccagagaaacttggtaaggtgtgccggcttcctc
ttcaccttccgccatgatttggtgctggacatgcagtcccactcactagacattttggag
cattacgtggaaatgcccatccagcggttggagaggaaaccttctctgaccatgccctca
gcagttcataaggatctttgtgattatattgggctcatctag

>gi568815587r:74596501_74830888|GENSCAN_predicted_peptide_2|147_aa
MPEKEEKGTQVLTEGPGPFLCSGTHKDTESYHIKVESGKVDDRDWEGYGEREDEEHWAED
LLNPEGCGYLLSLSVCSAETSGFFSQKVSPSETPALATLRGSDAAPSSISSSRLEALKAQ
EGQLAPCTVLVLEHKAHPRAAPKLFYE

>gi568815587r:74596501_74830888|GENSCAN_predicted_CDS_2|444_bp
atgccagaaaaagaggagaaaggaacacaggtcctcaccgagggacccggccccttcctg
tgctctgggacccataaggatacagaatcctatcacataaaggtagagagtggaaaggta
gatgacagagactgggaagggtatggggagcgggaagatgaagagcactgggctgaagac
ctattaaacccagagggctgtggatacctcctgagcctcagcgtgtgctcagctgaaact
tctggcttcttctcccagaaggtatcaccaagtgagacaccagcactggcaacactgagg
ggctcggatgctgctccctcctctatctcctcctccagacttgaggctctaaaagcacag
gaagggcaattagctccctgcactgtgttggtgctcgagcataaagcccacccgagagca
gcgccgaagctgttttatgaatga

>gi568815587r:74596501_74830888|GENSCAN_predicted_peptide_3|494_aa
MVPEVRVLSSLLGLALLWFPLDSHARARPDMFCLFHGKRYSPGESWHPYLEPQGLMYCLR
CTCSEDVSSGRAETLLVPLIPSAQKKAWHPVDLQQVLSVNESTSTHQRQLSIVESTRALG
AHVSCYRLHCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQHGEIFSA
HELFPSRLPNQCVLCSCTEGQIYCGLTTCPEPGCPAPLPLPDSCCQACKGESVPPSGSTH
PPLHSMGLAMDCESREELQRHPQDPCSSDAGRKRGPGTPAPTGLSAPLSFIPRHFRPKGA
GSTTVKIVLKEKHKKACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQDCQRVTCP
TEYPCRHPEKVAGKCCKICPEDKADPGHSEISSTRCPKAPGRVLVHTSVSPSPDNLRRFA
LEHEASDLVEIYLWKLVKGIFHLTQIKKVRKQDFQKEAQHFRLLAGPHEGHWNVFLAQTL
ELKVTASPDKVTKT

>gi568815587r:74596501_74830888|GENSCAN_predicted_CDS_3|1485_bp
atggttcccgaggtgagggtcctctcctccttgctgggactcgcgctgctctggttcccc
ctggactcccacgctcgagcccgcccagacatgttctgccttttccatgggaagagatac
tcccccggcgagagctggcacccctacttggagccacaaggcctgatgtactgcctgcgc
tgtacctgctcagaggatgtgagctccgggagggcagaaaccttgttggtcccactaatt
cctagtgctcagaagaaggcctggcacccagtagacctgcagcaagtattgagcgtgaat
gagtccacgtctacccaccagaggcagctcagcatcgtggaaagtacacgggccctgggc
gcccatgtgagttgttaccgcctccactgtccgcctgtccactgcccccagcctgtgacg
gagccacagcaatgctgtcccaagtgtgtggaacctcacactccctctggactccgggcc
ccaccaaagtcctgccagcacaacgggaccatgtaccaacacggagagatcttcagtgcc
catgagctgttcccctcccgcctgcccaaccagtgtgtcctctgcagctgcacagagggc
cagatctactgcggcctcacaacctgccccgaaccaggctgcccagcacccctcccgctg
ccagactcctgctgccaggcctgcaaaggtgagtctgtccctccatctggcagcactcac
ccacccctccactccatgggcctagccatggactgtgagagccgtgaggaactgcagaga
catcctcaggatccatgttccagtgatgctgggagaaagagaggcccgggcaccccagcc
cccactggcctcagcgcccctctgagcttcatccctcgccacttcagacccaagggagca
ggcagcacaactgtcaagatcgtcctgaaggagaaacataagaaagcctgtgtgcatggc
gggaagacgtactcccacggggaggtgtggcacccggccttccgtgccttcggccccttg
ccctgcatcctatgcacctgtgaggatggccgccaggactgccagcgtgtgacctgtccc
accgagtacccctgccgtcaccccgagaaagtggctgggaagtgctgcaagatttgccca
gaggacaaagcagaccctggccacagtgagatcagttctaccaggtgtcccaaggcaccg
ggccgggtcctcgtccacacatcggtatccccaagcccagacaacctgcgtcgctttgcc
ctggaacacgaggcctcggacttggtggagatctacctctggaagctggtaaaaggaatc
ttccacttgactcagatcaagaaagtcaggaagcaagacttccagaaagaggcacagcac
ttccgactgctcgctggcccccacgaaggtcactggaacgtcttcctagcccagaccctg
gagctgaaggtcacggccagtccagacaaagtgaccaagacataa

>gi568815587r:74596501_74830888|GENSCAN_predicted_peptide_4|132_aa
MAEEGIAAGGVMEVNTALQEVLKTALIHDGLARGIREAAKVLDKRQAHLCVLASNCDEPM
YVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPHKVVGYSCVVVKDYGKESQA
KDVIEEYFKCKK

>gi568815587r:74596501_74830888|GENSCAN_predicted_CDS_4|399_bp
atggccgaggaaggcattgctgctggaggtgtaatggaggttaatactgctttacaagag
gtgctgaagaccgccctcatccacgatggcctagcacgtggaattcgcgaagctgccaaa
gtcttagacaagcgccaagcccatctttgtgtgcttgcatccaactgtgatgagcctatg
tatgtcaagttggtggaggccctttgtgctgaacaccaaatcaacctaattaaggttgat
gacaacaagaaactaggagaatgggtaggcctctgtaaaattgacagagaggggaaaccc
cataaagtggttggttacagttgtgtagtagttaaggactatggcaaggagtctcaggcc
aaggatgtcatcgaagagtatttcaaatgcaagaaatga

>gi568815587r:74596501_74830888|GENSCAN_predicted_peptide_5|176_aa
MAAAGPSTRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLP
PRPEESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCRARGPGWARRRARD
DGQADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQEPRAAPAEPEEKTEAQNR

>gi568815587r:74596501_74830888|GENSCAN_predicted_CDS_5|531_bp
atggcggctgcaggtccgagtactcgggcctcttccgcggcggcagcagccgctctgagt
cggcggggccggcggggccgctgtgacgagacggcggcagctaagactggggccccaggc
ccggcttctggaccttcgctgttggtgttgtcgccgccgttgctgcagccgccgctgccg
ccgcggccggaggaatcgggctgcgccgggtgcctggagccccccggagaagcagcggcc
ctgccgtgcggccactcgctttgccgaggctgcgcccaacgcgccgccgacgcggcgggc
ccgggttgccctcgctgccgcgcccgcggcccaggctgggcccgccgtcgggcccgcgac
gacggccaggccgactcagaggtgctgggcgagtgcgcccgccgcagccaacccgagcgc
tgccgcccgcgccgggacgggggcgcggctgccgcggggcccaggccagagcaggagccg
cgtgccgcgcctgcggagccagaagagaaaactgaggcccagaacagataa

>gi568815587r:74596501_74830888|GENSCAN_predicted_peptide_6|431_aa
MDTFLDTYTLPRLNQEEAESLNRPITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFDEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILA
NQIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKI
QQPFMLKTLNKLGTDGTYFKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLF
NIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKV
SGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENHKPL
LKEIKEDTNKWKNIPCSWVGRINIVKMAILPKSTLHLYLAFCQSLNIPSTFKPFYMQALL
PGMDIPSFLIW

>gi568815587r:74596501_74830888|GENSCAN_predicted_CDS_6|1296_bp
atggatacattcctcgacacatacactctcccaagactaaaccaggaagaagctgaatct
ctgaatagaccaataacaggagctgaaattgtggcaataatcaatagtttaccaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaagaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
tttgatgaggccagcatcattctgataccaaagccgggcagagacacaaccaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaccaaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaatatccgcaaatcaataaatgtaatccagcatataaacaga
gccaaagacaaaaaccacatgattatctcaatagatgcagaaaaagcctttgacaaaatt
caacaacccttcatgctaaaaactctcaataaattaggtactgatgggacgtatttcaaa
ataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattc
aacatagtgttggaagttctggccagggcaatcaggcaggagaaggaaataaaaggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtttatcta
gaaaaccccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaacaacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatat
ctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaaccacaaaccactg
ctcaaggaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtagga
agaatcaatatcgtgaaaatggccatactgcccaagtccacactccacctatatttagct
ttttgccagtccctgaacatcccaagcaccttcaagcctttctacatgcaggctcttcta
cctggaatggacatcccctccttcctcatctggtga

>gi568815587r:74596501_74830888|GENSCAN_predicted_peptide_7|97_aa
MGKKHNRKTGNSKRQSASPPPKERSSSPATEQSWMENDFDELREEGFRRSNYSELREDIQ
TKGKEVENFEKNLEECITRITNTEKCLKELMELKTKA

>gi568815587r:74596501_74830888|GENSCAN_predicted_CDS_7|294_bp
atggggaaaaaacacaatagaaaaactggaaactctaaaaggcagagcgcctctcctcct
ccaaaggaacgcagttcctcaccagcaacggaacaaagctggatggagaatgattttgac
gagctgagagaagaaggcttcagacgatcaaattactctgagctacgggaggacattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaata
accaatacagagaagtgtttaaaggagctgatggagctgaaaaccaaggcttga

>gi568815587r:74596501_74830888|GENSCAN_predicted_peptide_8|172_aa
MGSSCCALLWLGGELQVLAWALAPVRLWLDQDYCKWLPLLALGNVLREEKLQEEKPSEDQ
IHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLERCPARLSDSENEEPSRGQMTQTHRSAF
VSKNNSYSLAFLAGHGWGVGTKRLHKAARPWAQPTKPFSPPSFLGLQWEGLL

>gi568815587r:74596501_74830888|GENSCAN_predicted_CDS_8|519_bp
atggggtccagctgctgtgccttgctgtggctgggtggggagctccaggtgctggcatgg
gcactggctcctgtgaggctgtggctggaccaggactactgcaagtggcttccactgctg
gcactggggaacgtgctgagagaagaaaagttacaagaggaaaaaccctctgaagatcaa
atccacaagctgttaccagaggatacagaaacagggaaaaggaaaatggatgaacagaaa
aaaagagatgaaccattagtactgaaaacaaatctggaacgttgtcctgcacgtctctca
gattcagagaatgaagaaccttctcgaggccagatgacacagacacatcgctcggcattt
gtttccaagaacaactcctactccttagctttcctggcaggccacggctggggtgtgggc
accaagagacttcacaaagcagcaaggccctgggcccagcccacgaaaccattttctcct
cctagctttctgggcctgcagtgggagggcttgctgtga