GENSCAN 1.0	Date run:  4-Nov-116	Time: 06:15:34

Sequence gi568815596r:68845371_69050755 : 205385 bp : 40.22% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2515   2656  142  0  1   54   79    95 0.088   4.21
 1.02 Intr +  10359  10467  109  1  1   39   57    93 0.064  -0.28
 1.03 Intr +  12318  12489  172  0  1  107   66    46 0.323   3.32
 1.04 Term +  15779  15880  102  1  0   72   34   153 0.343   5.60
 1.05 PlyA +  17048  17053    6                               1.05

 2.03 PlyA -  18906  18901    6                               1.05
 2.02 Term -  21201  20261  941  1  2   87   43  1005 0.875  87.17
 2.01 Init -  25988  25655  334  2  1   89  115   411 0.998  39.40
 2.00 Prom -  32881  32842   40                              -5.75

 3.03 PlyA -  35098  35093    6                               1.05
 3.02 Term -  46955  46795  161  0  2   64   31   131 0.742   2.12
 3.01 Init -  50594  50198  397  2  1   78   92   207 0.491  17.01
 3.00 Prom -  75529  75490   40                              -4.65

 4.00 Prom +  76925  76964   40                              -4.65
 4.01 Init +  79238  79294   57  1  0   95  111    75 0.450  11.86
 4.02 Intr +  80315  80456  142  1  1   88   93    98 0.989   9.31
 4.03 Intr +  81370  81444   75  2  0   93   81    32 0.729   1.57
 4.04 Intr +  83319  83485  167  1  2   97   94    40 0.581   4.26
 4.05 Term +  86902  87132  231  0  0  103   40   129 0.413   5.09
 4.06 PlyA +  88504  88509    6                              -0.45

 5.05 PlyA -  88896  88891    6                               1.05
 5.04 Term -  90648  90463  186  0  0   83   50   111 0.904   3.31
 5.03 Intr -  91680  91659   22  2  1  105   98    37 0.894   3.03
 5.02 Intr -  94907  94736  172  0  1   78   46    47 0.015  -2.42
 5.01 Init -  98837  98426  412  2  1   79   81   333 0.910  28.42
 5.00 Prom -  99647  99608   40                              -8.65

 6.06 PlyA -  99788  99783    6                              -0.45
 6.05 Term - 100080  99998   83  1  2   99   45    47 0.771  -1.62
 6.04 Intr - 101090 100934  157  2  1   44   94   100 0.817   4.86
 6.03 Intr - 101887 101777  111  1  0   62   91   108 0.976   8.16
 6.02 Intr - 104893 104756  138  1  0   85   77   105 0.980   8.84
 6.01 Init - 113731 113705   27  1  0   98   73    19 0.254   1.13
 6.00 Prom - 113895 113856   40                              -3.85

 7.00 Prom + 118202 118241   40                              -6.75
 7.01 Init + 118407 118469   63  2  0   56   75    72 0.180   3.90
 7.02 Intr + 128486 128653  168  1  0   53   77   165 0.515  11.12
 7.03 Intr + 132267 132404  138  2  0   60   51   208 0.823  14.04
 7.04 Intr + 133501 133611  111  0  0   87   93    42 0.896   4.26
 7.05 Intr + 134543 134690  148  1  1   76  113   129 0.895  13.09
 7.06 Term + 136373 136380    8  0  2   98   50     0 0.210  -5.75
 7.07 PlyA + 136439 136444    6                               1.05

 8.06 PlyA - 136501 136496    6                               1.05
 8.05 Term - 140009 139850  160  1  1   21   44   170 0.445   2.33
 8.04 Intr - 143681 143530  152  2  2    9   62   158 0.235   3.34
 8.03 Intr - 150170 150047  124  1  1   67  105    77 0.609   6.97
 8.02 Intr - 165922 165747  176  1  2   45   64   116 0.102   2.72
 8.01 Init - 168384 167617  768  0  0   60   26   293 0.137  13.04
 8.00 Prom - 170205 170166   40                              -6.95

 9.00 Prom + 174570 174609   40                              -4.55
 9.01 Sngl + 177869 178225  357  1  0   41   42   585 0.997  45.01
 9.02 PlyA + 178717 178722    6                               1.05

10.03 PlyA - 184639 184634    6                               1.05
10.02 Term - 187321 187115  207  1  0   45   41   198 0.660   7.16
10.01 Intr - 201092 201064   29  0  2  114   81    18 0.150   0.62

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  91969  91875   95  1  2   75   14   108 0.872   2.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:68845371_69050755|GENSCAN_predicted_peptide_1|174_aa
PQAFILTQTSINFPDGLSTSNSSEQGNRTTLVNNDPGGRRWTKNLSDMIDNDIMAPSDKT
AWRHKGTLAQRSLAGLQVLWALQEILSELLTYGTHTLRKGRKRKHLYCREKTLKDVVVKN
SSKEGRKARDRKKPQGRDGSMSSDNYTNVDMDNEQVLPQNMTVHQLIRCVCGVR

>gi568815596r:68845371_69050755|GENSCAN_predicted_CDS_1|525_bp
cctcaagcatttatattgactcagaccagtatcaacttccctgatggactttctacctcc
aatagctctgaacaaggaaacaggacaactctggtaaacaatgatcctggtggaaggagg
tggacaaaaaacctgagtgacatgatagataacgacatcatggcaccatccgataagact
gcctggaggcataaggggacattagcacagaggagcctggctggtctgcaggttctctgg
gctttgcaggaaattctcagtgagctcttaacctatgggacccatacattgagaaagggc
aggaagaggaagcacctgtattgcagggagaaaactcttaaagatgtagtagtgaagaac
agctccaaagagggaaggaaagcaagagacaggaaaaagccccaggggagggatggaagt
atgtctagtgataactatacaaatgtggacatggataatgaacaggttttaccccagaac
atgaccgtgcatcagctgattcggtgtgtctgtggtgttcgctga

>gi568815596r:68845371_69050755|GENSCAN_predicted_peptide_2|424_aa
MGSLVLTLCALFCLAAYLVSGSPIMNLEQSPLEEDMSLFGDVFSEQDGVDFNTLLQSMKD
EFLKTLNLSDIPTQDSAKVDPPEYMLELYNKFATDRTSMPSANIIRSFKNEDLFSQPVSF
NGLRKYPLLFNVSIPHHEEVIMAELRLYTLVQRDRMIYDGVDRKITIFEVLESKGDNEGE
RNMLVLVSGEIYGTNSEWETFDVTDAIRRWQKSGSSTHQLEVHIESKHDEAEDASSGRLE
IDTSAQNKHNPLLIVFSDDQSSDKERKEELNEMISHEQLPELDNLGLDSFSSGPGEEALL
QMRSNIIYDSTARIRRNAKGNYCKRTPLYIDFKEIGWDSWIIAPPGYEAYECRGVCNYPL
AEHLTPTKHAIIQALVHLKNSQKASKACCVPTKLEPISILYLDKGVVTYKFKYEGMAVSE
CGCR

>gi568815596r:68845371_69050755|GENSCAN_predicted_CDS_2|1275_bp
atgggctctctggtcctgacactgtgcgctcttttctgcctggcagcttacttggtttct
ggcagccccatcatgaacctagagcagtctcctctggaagaagatatgtccctctttggt
gatgttttctcagagcaagacggtgtcgactttaacacactgctccagagcatgaaggat
gagtttcttaagacactaaacctctctgacatccccacgcaggattcagccaaggtggac
ccaccagagtacatgttggaactctacaacaaatttgcaacagatcggacctccatgccc
tctgccaacatcattaggagtttcaagaatgaagatctgttttcccagccggtcagtttt
aatgggctccgaaaataccccctcctcttcaatgtgtccattcctcaccatgaagaggtc
atcatggctgaacttaggctatacacactggtgcaaagggatcgtatgatatacgatgga
gtagaccggaaaattaccatttttgaagtgctggagagcaaaggggataatgagggagaa
agaaacatgctggtcttggtgtctggggagatatatggaaccaacagtgagtgggagact
tttgatgtcacagatgccatcagacgttggcaaaagtcaggctcatccacccaccagctg
gaggtccacattgagagcaaacacgatgaagctgaggatgccagcagtggacggctagaa
atagataccagtgcccagaataagcataaccctttgctcatcgtgttttctgatgaccaa
agcagtgacaaggagaggaaggaggaactgaatgaaatgatttcccatgagcaacttcca
gagctggacaacttgggcctggatagcttttccagtggacctggggaagaggctttgttg
cagatgagatcaaacatcatctatgactccactgcccgaatcagaaggaacgccaaagga
aactactgtaagaggaccccgctctacatcgacttcaaggagattgggtgggactcctgg
atcatcgctccgcctggatacgaagcctatgaatgccgtggtgtttgtaactaccccctg
gcagagcatctcacacccacaaagcatgcaattatccaggccttggtccacctcaagaat
tcccagaaagcttccaaagcctgctgtgtgcccacaaagctagagcccatctccatcctc
tatttagacaaaggcgtcgtcacctacaagtttaaatacgaaggcatggccgtctccgaa
tgtggctgtagatag

>gi568815596r:68845371_69050755|GENSCAN_predicted_peptide_3|185_aa
MDPNQEEIPDLPEKEFRRLVIKLIREGPEKGKAQCKEIQKMIQEVKEEIFKEIDSLKKKQ
KVQETLDTLLEMQNALESLSNRTEQVEERNSELKDKVFRLIQSNKDKEKTIRKYEQLGMV
AHACNPSTLGGRVLEVLARAVRQEKETKGIQIRKEEVKLSLFADDVIIYLGNPKDSSRKL
LELIK

>gi568815596r:68845371_69050755|GENSCAN_predicted_CDS_3|558_bp
atggatccaaaccaagaagaaatccctgatttacctgaaaaagaattcaggaggttagtt
attaagctaatcagggagggaccagagaaaggtaaagcccaatgcaaggaaatccaaaaa
atgatacaagaagtgaaggaagaaatattcaaggaaatagatagcttaaagaaaaaacaa
aaagttcaggaaacgttggacacacttttagaaatgcaaaatgctctggaaagtctcagc
aatagaactgaacaagtagaagaaagaaattcagagctcaaagacaaggtcttcagatta
atccaatccaacaaagacaaagaaaaaacaataagaaaatatgaacagctgggcatggtg
gctcatgcctgtaatccaagcactttgggaggtcgagtactggaagtcttagccagagca
gtcagacaagagaaagaaacaaagggcatccaaatccgtaaagaggaagttaaactgtca
ctgtttgctgacgacgtgatcatttaccttggaaaccctaaggactcctccagaaagctc
ctagaattgataaaataa

>gi568815596r:68845371_69050755|GENSCAN_predicted_peptide_4|223_aa
MDKAVFPSLDDISKALDKQAFKYYPSTRGLTYTVLPSWVKNLAQYGKPIKNMCRDDPTYF
AQQQKEGTALAIDSNSCFEIQLLSFMGLFICDTRFPAGTGFLPEMPGSRPAALPMCIITL
GCHWLGCDSSLLRKSQHTPLDLRGLVKSREEPAVSKLRTVGMGELARQPQEAAAQCSFSG
YLLTLCSQFPFQEIRSSAPYPAWNVLLLLVLLSAWGGETHPIT

>gi568815596r:68845371_69050755|GENSCAN_predicted_CDS_4|672_bp
atggacaaggcagtcttcccaagtttggatgacattagcaaggccctggacaagcaggct
tttaagtattacccgtctactcgcggcctgacttacactgttttacccagctgggtcaag
aacttagcacagtatggaaagcccattaagaacatgtgcagagatgaccccacctacttt
gcccagcagcaaaaagaaggtactgccctggcaattgactccaattcttgttttgaaatc
caacttctgtcctttatgggactcttcatctgcgatactcgctttccagctgggactggt
ttccttccagaaatgccaggttcaaggcctgctgccctcccgatgtgcatcatcacactt
ggctgtcattggctgggctgtgatagctccctcctgagaaagagccagcacacccctcta
gaccttagaggacttgtcaagtctagggaagagccagctgtgtccaaactcaggaccgtg
ggtatgggtgagctggctcgccagccacaggaggcagctgcccagtgttcattttctggc
tacctgctcactctgtgctctcagtttcctttccaagagatcaggagcagtgccccttat
cctgcctggaatgtgctgcttctccttgtcctgctgtctgcttggggcggagagacccac
cccataacataa

>gi568815596r:68845371_69050755|GENSCAN_predicted_peptide_5|263_aa
MGALLHLSAFRQRGSCLNPPVHTDPNPKGPGEGAVSRSGRPRAVAPECGTGPSASAEEEP
ILSENSQRGVSRTGSWAGVEPRRASLHRAGPVSVGPVSLLDLCLKEPNDLEHLTTTESHG
HSASDQGSLPSRPRRRPELEKNYSKIHMEQKRAQTAKAILSKQNKTNEQTKNKAEDITLP
DFKLHYKATVTKTAGSFAGSGQGINPSAKGDSKCNAACLTTGYTGSDLTSDSPDFNLLCR
VLDPQSLSAQGFKVWSNHSPAKQ

>gi568815596r:68845371_69050755|GENSCAN_predicted_CDS_5|792_bp
atgggtgctttgctccacttgagtgcattccggcagcgtgggagctgtttgaatccccca
gtgcacacagatcccaaccccaagggtccaggggagggagctgtgagcagatccggacgt
cccagggctgtggctccggagtgcggaactgggcccagtgcttcagcagaagaggagccc
atactctcagaaaactctcagagaggggtgagtcgcacaggttcctgggctggtgtggaa
cctaggcgtgcctccctccacagagctggtccagtaagtgtggggcctgtctccctgctg
gacctctgcctgaaggagcccaacgacctggaacacctaacaacaacagaaagtcacggc
cacagtgccagtgatcaggggtccctcccctcaagaccgaggaggagacctgaattagaa
aaaaactattctaaaattcatatggaacaaaaaagagcccaaacagccaaagcaatccta
agcaaacaaaacaaaacaaatgaacaaacaaaaaacaaagctgaagacatcacactacca
gacttcaaactacactacaaagctacagtaaccaaaacggcagggtcctttgctggcagt
ggacagggcatcaatccttcagcaaagggagacagcaaatgcaatgctgcctgtctgacc
acgggatatactggttcagatctcactagtgatagcccagacttcaacttgctttgcagg
gtattagatccccaatcccttagtgcccagggattcaaagtttggagtaatcacagccct
gccaaacagtag

>gi568815596r:68845371_69050755|GENSCAN_predicted_peptide_6|171_aa
MSIICFELYVFNIISPSNNGGNVQETVTIDNEKNTAIINIHAGSCSSTTIFDYKHGYIAS
RVLSRRACFILKMDHQNIPPLNNLQWYIYEKQALDNMFSSKYTWVKYNPLESLIKDVDWF
LLGSPIEKLCKHIPLYKGEVVENTHNVGAGGCAKAGLLGILGISICADIHV

>gi568815596r:68845371_69050755|GENSCAN_predicted_CDS_6|516_bp
atgagcatcatctgctttgaactatatgtttttaacatcatcagcccaagcaacaatggt
ggcaatgttcaggagacagtgacaattgataatgaaaaaaataccgccatcattaacatc
catgcaggatcatgctcttctaccacaatttttgactataaacatggctacattgcatcc
agggtgctctcccgaagagcctgctttatcctgaagatggaccatcagaacatccctcct
ctgaacaatctccaatggtacatctatgagaaacaggctctggacaacatgttctccagc
aaatacacctgggtcaagtacaaccctctggagtctctgatcaaagacgtggattggttc
ctgcttgggtcacccattgagaaactctgcaaacatatccctttgtataagggggaagtg
gttgaaaacacacataatgtcggtgctggaggctgtgcaaaggctgggctcctgggcatc
ttgggaatttcaatctgtgcagacattcatgtttag

>gi568815596r:68845371_69050755|GENSCAN_predicted_peptide_7|211_aa
MTTMLRALTEKVDNMQEDMGNAASEISKRDRVMSIYALQKDNLRVNEENALEYKKLVTRV
INCMTVVKVQVRGAVGKNINVNDDNNNAGSGQQSVSVNNEHNVANVDNNNGWDSWNSIWD
YGNGFAATRLFQKKTCIVHKMNKEVMPSIQSLDALVKEKKLQGKGPGGPPPKGLMYSVNP
NKVDDLSKFGKNIANMCRGIPTYMAEEMQVP

>gi568815596r:68845371_69050755|GENSCAN_predicted_CDS_7|636_bp
atgactacaatgctaagagcactaacggaaaaagtagacaacatgcaagaggacatgggt
aatgctgccagcgaaatttccaagcgtgatagagtcatgtctatctatgcacttcagaaa
gacaacctcagggttaatgaagaaaatgcattggaatataagaaactggtgaccagagtg
atcaattgcatgactgttgtgaaagtccaggtgaggggagctgtgggcaagaatatcaac
gtcaatgatgacaacaacaatgctggaagtgggcagcagtcagtgagtgtcaacaatgaa
cacaatgtggccaatgttgacaataacaacggatgggactcctggaattccatctgggat
tatggaaatggctttgctgcaaccagactctttcaaaagaagacatgcattgtgcacaaa
atgaacaaggaagtcatgccctccattcaatcccttgatgcactggtcaaggaaaagaag
cttcagggtaagggaccaggaggaccacctcccaagggcctgatgtactcagtcaaccca
aacaaagtcgatgacctgagcaagttcggaaaaaacattgcaaacatgtgtcgtgggatt
ccaacatacatggctgaggagatgcaagtgccatag

>gi568815596r:68845371_69050755|GENSCAN_predicted_peptide_8|459_aa
MRSCPQATLPTSPARGESVFARLAWGGGDNSRHLLVQNEVQVKSAVAGWTPILPASPLPG
ADEHQSGQREPLEADAEGSPLRRGHGPQPGESRVRSFPRSANSPRPSGTRHPRALPRGSF
IPPRSLATPRKQLSGGVQGFPSGFRSDAVSGFRVSRIPILSSASFKGEGCLGPGPPGSSR
GRAELLQWKEFRPDGSLSQILNMMGGGGGFKLFLVGAVLCLLSFLSAPLSRSYGEESSKA
ATLWTKAAKARVGPAGLDDLKDSEEIYRNQMGKGKQKHWWELVREEKGYDNVMERVFMGL
ARNRKELECGKRVEGHLPHFEVKGVGEGAKLMLKAFLKGSDSPGKGRQDQHEEGTLGTAA
AAIQLILAAIEESSRLSETCMVLASCRTESDQEGPSDKNILPNIQTCYRFMDDDRRHETS
GSETKDFITRVTASSVSMSMFVSVLVAYKSHRSDDVDQD

>gi568815596r:68845371_69050755|GENSCAN_predicted_CDS_8|1380_bp
atgcgctcctgtccccaggcgaccctgccaacgagcccggcccggggcgaaagcgttttc
gcccgcttagcctggggtgggggggacaactcgcggcacttacttgtccaaaatgaagta
caggtcaaatccgccgtagcaggctggacccccatcctccctgcgtcccccttgcccggc
gcagatgagcaccagagtggccaaagagagccactggaagccgatgccgagggctctccg
ctccgccgtggccatggcccgcagcccggggagagcagggtccgctccttcccacgctcc
gcgaactcgccacgaccctcagggacgcgccatccgcgggcccttcctcgcgggtccttt
attccccctcgctccctcgcaactccccggaagcaattgtctggaggagttcaaggtttc
ccctctggtttccgctccgatgctgtttctgggtttcgggtttcaaggatcccaatcctg
tcctccgcttcttttaaaggggagggctgcctcggtccggggccgccgggcagctcccga
ggccgcgccgagcttttgcaatggaaggagttccgtcccgacggttctttgtcccagatt
ttaaatatgatgggggggggggggggtttcaaattgttcttggtgggggcagtgctttgc
cttctctccttcctctctgcccccctttcgcgttcttacggggaagaaagttcaaaggct
gccaccttgtggacaaaggcggcgaaagcacgcgtgggacccgcgggactcgatgacttg
aaagacagtgaggaaatctatagaaatcagatgggtaagggaaagcagaaacactggtgg
gagctggtaagagaagaaaagggatatgacaatgtgatggagagagtgtttatgggattg
gcaaggaataggaaagagcttgaatgtggaaagcgggtggagggacaccttccccacttt
gaagtgaaaggggttggagagggagctaagctaatgctaaaagcctttttaaagggctct
gacagccctggaaaggggagacaggaccaacacgaagagggaactctggggacggcagca
gctgcaattcagcttattctggcagccatcgaggagtcttccaggctcagtgagacatgt
atggttctggcttcatgtagaactgagagtgaccaggaaggcccttcagacaaaaatata
ctcccaaatatacagacttgctatcgtttcatggatgatgacagaagacatgagacttct
ggatcagagacaaaggactttattactcgtgtcacagcaagcagtgtgagcatgagcatg
tttgtgtcagtgctcgttgcctataagtctcatagaagtgatgatgtagaccaagattga

>gi568815596r:68845371_69050755|GENSCAN_predicted_peptide_9|118_aa
MSAETIDGDGDGYGGGGGRDDKDDGDGSGDGDSDSGDYGNVDSCDEDDDGDKDNGDGGGG
DSDSDDDNGSSDDSDGGGSDDGDGDMVVVVEVEMMMMMMMMAVVMVVVVLVQKQNMVL

>gi568815596r:68845371_69050755|GENSCAN_predicted_CDS_9|357_bp
atgagtgctgagacgatagatggtgatggtgatggttatggtggtggaggtggacgtgat
gataaagatgatggtgatggtagtggtgatggtgacagtgatagtggtgattatggcaat
gttgatagttgtgatgaagatgatgatggtgataaggataatggtgatggtggtggtggt
gatagtgatagtgatgatgataatggtagtagtgatgatagtgatggtggtggtagtgat
gatggtgatggtgatatggtggtggtggtggaggtggagatgatgatgatgatgatgatg
atggcagtggtcatggtggtggtggtgttagtgcagaaacagaatatggtcctctaa

>gi568815596r:68845371_69050755|GENSCAN_predicted_peptide_10|78_aa
XQETSSSDVKIQHKSTVVKNTDNGLVTQKVFPIIEMHSCGSIPHTRQIHRDEATVATLHP
PERSKGDGSTSSGESGCG

>gi568815596r:68845371_69050755|GENSCAN_predicted_CDS_10|237_bp
naacaggaaactagcagtagtgacgttaagattcaacacaaaagcactgttgttaagaat
acagacaatgggttagtaacccaaaaggtatttcccataattgaaatgcacagctgcggc
tccattcctcacactcgccagattcacagagatgaagccacagtagccactttgcatccc
ccagaaagatcaaagggggatgggtcaacatcgtcgggtgagagtggctgtggatga