GENSCAN 1.0	Date run:  4-Nov-116	Time: 06:09:50

Sequence gi568815578f:6670127_6879086 : 208960 bp : 39.85% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10886  11008  123  1  0   55  131    60 0.251   6.86
 1.02 Term +  18486  18662  177  2  0    3   54   132 0.410  -2.00
 1.03 PlyA +  20111  20116    6                               1.05

 2.11 PlyA -  20354  20349    6                               1.05
 2.10 Term -  23629  23425  205  0  1   59   37   134 0.631   1.26
 2.09 Intr -  27695  27347  349  0  1   52   44   263 0.594  11.79
 2.08 Intr -  30130  30040   91  1  1   95   76    45 0.799   2.65
 2.07 Intr -  33309  33208  102  0  0   73   70    88 0.910   4.95
 2.06 Intr -  35644  35526  119  2  2   -5   63   142 0.033   1.66
 2.05 Intr -  40592  40428  165  0  0   68  102    88 0.147   7.21
 2.04 Intr -  45417  45347   71  2  2   60   53    74 0.070  -0.99
 2.03 Intr -  48298  48243   56  1  2   91   59    78 0.082   2.06
 2.02 Intr -  56430  56283  148  2  1   74   78    78 0.583   4.72
 2.01 Init -  58440  58361   80  0  2   83   69    47 0.820   2.88
 2.00 Prom -  62871  62832   40                              -6.85

 3.00 Prom +  65146  65185   40                              -5.85
 3.01 Init +  66201  66333  133  2  1   53   35    65 0.171  -1.94
 3.02 Intr +  67301  67422  122  0  2   32   87   127 0.593   6.29
 3.03 Intr +  68691  68791  101  2  2   43   37    77 0.291  -3.91
 3.04 Intr +  71309  71436  128  2  2   44   25   167 0.227   5.40
 3.05 Intr +  81375  81449   75  1  0   56   94    79 0.399   3.87
 3.06 Term +  96312  96490  179  1  2  145   55    74 0.068   6.67
 3.07 PlyA +  96720  96725    6                               1.05

 4.00 Prom +  99783  99822   40                              -9.25
 4.01 Init + 100001 100346  346  1  1   92  100   369 0.664  33.92
 4.02 Term + 108119 108963  845  0  2   58   38   604 0.947  44.47
 4.03 PlyA + 109683 109688    6                               1.05

 5.04 PlyA - 109901 109896    6                               1.05
 5.03 Term - 117928 117597  332  2  2   77   47   172 0.810   5.83
 5.02 Intr - 148648 148498  151  1  1   75   53    76 0.039   1.61
 5.01 Init - 152955 152881   75  0  0   85  103    56 0.474   7.94
 5.00 Prom - 178321 178282   40                              -2.15

 6.03 PlyA - 181377 181372    6                               1.05
 6.02 Term - 194176 193904  273  1  0   64   48   155 0.228   3.59
 6.01 Init - 205931 205842   90  2  0   67   11   126 0.052   3.34

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  35624  35526   99  2  0   80   63   128 0.934   9.81
S.002 Term +  96312  96474  163  0  1  145   53   127 0.868  11.33
S.003 Init - 119534 119483   52  2  1   28   92    58 0.890   1.57
S.004 Init + 128980 129016   37  0  1   86   81    60 0.824   5.32


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:6670127_6879086|GENSCAN_predicted_peptide_1|99_aa
AAAEAFAWVISPTSALGSRKCWNYYHPVDKIEADLPSVTQPVTLVALQGMDFSGSSQWEG
GDLLGDENNLRSLLAMHNNPWLLGAQCWECVGGANEEME

>gi568815578f:6670127_6879086|GENSCAN_predicted_CDS_1|300_bp
gctgcagctgaggcttttgcttgggtaatttcccccacgtcagctctaggaagtaggaag
tgttggaactactaccatccagttgacaaaattgaagctgacttgcccagcgtcacacag
ccggtaactctggtggccttacaaggaatggatttcagtggcagttctcagtgggaagga
ggggacttgttgggagatgaaaacaatctgagaagccttttagcaatgcataataaccct
tggcttttaggggcacagtgttgggaatgcgtagggggagccaatgaggagatggaatga

>gi568815578f:6670127_6879086|GENSCAN_predicted_peptide_2|461_aa
MRPEQLPHSPGHQEVTNSCDNRFSCAKQNTGNPSFGGQNTDTGLEFSLGLFSTDLNQDGK
SSMINWHLKPQSSSTTIKKWKQKELNLSVAIELKVFLAMRDRLKRKCGPMLRTHSGAEEN
KHLLKNTYKTSFPDQGKQRSPKPLQAKEKTDALWVPSRNGVVGFHGGNGCKEQALITSEN
MLRGRWGYDHRADEEADTGWALVTYDKPQDLDKCVIVKEKTMESQEEDAESRKNWRKIKK
GEESKNQHVLNPPKQPQKLNSGFSRMKLLDTCAGNFAGSSQSTQMLNGKDSREVTACRGV
DRMKRSNRGLSHQGLATAGACTIPRLRAEGKGQCQQNPERAAATGGRPLTGVMAISEGVI
TVNTRTDPKECGDKHSNFSLTSRKLGGTGSGSQGLPVEVVEITTGNGEGEAAERECCLEP
KAVPLGVPQKPSPPRNDGWKDHSRTRSFAYAGLLTRLLYLH

>gi568815578f:6670127_6879086|GENSCAN_predicted_CDS_2|1386_bp
atgaggccggagcagctgcctcacagtccaggtcaccaagaagtcacaaacagttgtgat
aataggttcagttgtgctaagcaaaatacaggaaatccgtcatttggaggtcaaaacact
gatactggacttgaattctcgttgggtctgttctcaactgatttaaaccaagatggaaaa
agtagcatgatcaattggcacctcaaaccccaatcttcatctactacgataaagaaatgg
aagcaaaaagagctaaatctgtccgtggccatagagctaaaggtctttttggccatgagg
gaccggctgaagaggaagtgtggtcccatgctcagaacacatagtggtgcagaagagaat
aagcaccttctcaagaatacatataaaacaagcttcccagaccaaggtaaacagagatct
cctaaacctctgcaggcaaaggaaaagactgatgctctttgggtcccttctagaaatggg
gttgtaggattccatggaggcaatggctgtaaggaacaagcattaattacttctgaaaac
atgctgcgagggagatggggctatgaccatcgtgctgatgaggaagcagatactggttgg
gcattggtaacttatgataaaccacaggatcttgacaagtgtgtgattgttaaagagaaa
acaatggaaagtcaggaagaggatgcagaaagcaggaagaactggagaaaaattaaaaag
ggagaggaatctaaaaaccagcatgtcctgaaccctccaaagcaaccccagaaactcaac
tctggcttctcaagaatgaaattgttggacacctgtgctggtaattttgcaggaagttcc
cagtccactcagatgctgaacggaaaagactctagagaagtgactgcatgcagaggtgtg
gacaggatgaagcgaagcaacagggggctaagccaccaggggctagcaacagcgggagcc
tgtaccatccccaggcttagagcagaggggaagggtcaatgccagcagaacccagaaaga
gctgcggccacgggagggaggccactgactggggtcatggccattagcgaaggtgtgatc
actgtcaacaccagaactgacccgaaggaatgtggagacaaacactccaacttctctctc
acatcacggaagctaggaggcacaggaagtgggtcccaagggttgcctgttgaagtagtt
gagataaccactggaaatggggaaggagaagctgctgagagagaatgttgccttgagccc
aaggcagttcctttaggagtgccccaaaagcccagccctcccaggaatgacggctggaaa
gatcattcgaggacacgcagctttgcctacgctgggctactgactcgcctactttacctg
cactga

>gi568815578f:6670127_6879086|GENSCAN_predicted_peptide_3|245_aa
MVIVINKNLPDISGGMGACSALGNKGFILNLFPTDNQSVILSGKEQLDPDEIGEKSILAW
IVTYTYLKVLTIRVHIIYRWVIALIKLLFDPELQFLHIQKENRVVMRIREDNSKVSGTFT
PSSQKPEARGYKVRDSIVPSVDIASWDTKQDSAKREDWGEGINEEKANKPEKWAKNLVKA
NRNIIASPIALGKQNLAFSKNFLPLVLGIIWASPRCCAWGLLESWEGQKALAPDSSCSSS
EQYFG

>gi568815578f:6670127_6879086|GENSCAN_predicted_CDS_3|738_bp
atggtcatcgtcataaacaagaacctcccagacatcagtggtggaatgggggcctgttca
gctcttggaaacaaaggctttattctgaatcttttcccgactgataaccagtctgtcatt
ctaagtgggaaggagcaactagaccctgatgagattggagagaaatccattcttgcctgg
attgtcacctacacatatcttaaagttttaaccattcgtgtacatatcatctaccgatgg
gtaattgcacttattaagttactttttgatcctgagcttcaatttctacatatacagaaa
gaaaatagggttgtaatgaggattcgagaagataacagcaaagtgtctggcacatttacc
cctagcagccagaagccagaagccagaggctacaaggtccgggatagcatcgttccatct
gtagatatcgcctcatgggacacaaaacaggatagtgcaaagagagaggactggggagaa
ggaattaatgaggaaaaggcgaacaagccagaaaagtgggcaaagaatctggtaaaagca
aaccgaaatataatagctagcccgatagctctgggaaagcagaacttggccttttccaaa
aattttctgcccttggttttggggatcatttgggcaagcccgaggtgctgtgcatggggg
ctcctggaatcctgggaagggcagaaagccttggccccagactcatcgtgcagcagctct
gagcagtatttcggctga

>gi568815578f:6670127_6879086|GENSCAN_predicted_peptide_4|396_aa
MVAGTRCLLALLLPQVLLGGAAGLVPELGRRKFAAASSGRPSSQPSDEVLSEFELRLLSM
FGLKQRPTPSRDAVVPPYMLDLYRRHSGQPGSPAPDHRLERAASRANTVRSFHHEESLEE
LPETSGKTTRRFFFNLSSIPTEEFITSAELQVFREQMQDALGNNSSFHHRINIYEIIKPA
TANSKFPVTRLLDTRLVNQNASRWESFDVTPAVMRWTAQGHANHGFVVEVAHLEEKQGVS
KRHVRISRSLHQDEHSWSQIRPLLVTFGHDGKGHPLHKREKRQAKHKQRKRLKSSCKRHP
LYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNSVNSKIPKAC
CVPTELSAISMLYLDENEKVVLKNYQDMVVEGCGCR

>gi568815578f:6670127_6879086|GENSCAN_predicted_CDS_4|1191_bp
atggtggccgggacccgctgtcttctagcgttgctgcttccccaggtcctcctgggcggc
gcggctggcctcgttccggagctgggccgcaggaagttcgcggcggcgtcgtcgggccgc
ccctcatcccagccctctgacgaggtcctgagcgagttcgagttgcggctgctcagcatg
ttcggcctgaaacagagacccacccccagcagggacgccgtggtgcccccctacatgcta
gacctgtatcgcaggcactcaggtcagccgggctcacccgccccagaccaccggttggag
agggcagccagccgagccaacactgtgcgcagcttccaccatgaagaatctttggaagaa
ctaccagaaacgagtgggaaaacaacccggagattcttctttaatttaagttctatcccc
acggaggagtttatcacctcagcagagcttcaggttttccgagaacagatgcaagatgct
ttaggaaacaatagcagtttccatcaccgaattaatatttatgaaatcataaaacctgca
acagccaactcgaaattccccgtgaccagacttttggacaccaggttggtgaatcagaat
gcaagcaggtgggaaagttttgatgtcacccccgctgtgatgcggtggactgcacaggga
cacgccaaccatggattcgtggtggaagtggcccacttggaggagaaacaaggtgtctcc
aagagacatgttaggataagcaggtctttgcaccaagatgaacacagctggtcacagata
aggccattgctagtaacttttggccatgatggaaaagggcatcctctccacaaaagagaa
aaacgtcaagccaaacacaaacagcggaaacgccttaagtccagctgtaagagacaccct
ttgtacgtggacttcagtgacgtggggtggaatgactggattgtggctcccccggggtat
cacgccttttactgccacggagaatgcccttttcctctggctgatcatctgaactccact
aatcatgccattgttcagacgttggtcaactctgttaactctaagattcctaaggcatgc
tgtgtcccgacagaactcagtgctatctcgatgctgtaccttgacgagaatgaaaaggtt
gtattaaagaactatcaggacatggttgtggagggttgtgggtgtcgctag

>gi568815578f:6670127_6879086|GENSCAN_predicted_peptide_5|185_aa
MGSIGDAQRRLSLGVRTHKGVSAQQVTVLVSSSLDSTLATPAGRATGSVQSSVHLHSSPE
WAGSCTSQNFPSQYPEERRFGPCLHPAEASGFPAPSPPPLPHPQLEQPFSASQNWCSRDG
RRAISPSPPAFSTREACEMTLPPKPSRITMEKDKHNRILFCVQTGRSQEILGTASVRFNK
RSGLR

>gi568815578f:6670127_6879086|GENSCAN_predicted_CDS_5|558_bp
atggggtcgattggtgatgcccagagaagactaagtttaggagtcagaacacacaagggt
gtgtctgctcaacaggtaactgtccttgttagtagctcattggattccacactggccacc
ccagcgggaagagcaacagggtcagtgcaaagctctgtccatcttcactcttcaccggaa
tgggcaggcagctgcacttctcagaatttcccctctcagtaccctgaggagaggcgcttt
ggtccgtgcttacaccccgctgaagccagtggatttccagctccctccccgcccccacta
ccccacccccagctggagcagcccttctcagcatcccagaactggtgttccagggatggg
aggagagccatttctccctcaccaccagcattttccacgagggaagcctgtgaaatgact
cttcctcccaagccgagtcgcattaccatggaaaaggacaaacacaataggatcctgttc
tgtgtccaaactggccgctcacaggagatcttaggcacagcttcagtcaggtttaacaaa
cgctcaggtttgcgatga

>gi568815578f:6670127_6879086|GENSCAN_predicted_peptide_6|120_aa
MVSARYRGHRQHLLQRLTIEDLHYWYDRDMKSTMQVLIGLRNLDIREKRTCSSHQGLNDH
PLPGTICQGTQQSHQALKLVLESSAAGTAPVAEASSHPAILSPDFLTVSHHKTIVHLAHI

>gi568815578f:6670127_6879086|GENSCAN_predicted_CDS_6|363_bp
atggtgagtgccaggtatagggggcatcggcaacatctgctacaacgtctaacaattgaa
gacctgcactactggtatgaccgtgatatgaaaagcaccatgcaagttctcataggactc
agaaatctggacatcagagaaaagagaacctgcagttctcaccagggactcaatgaccat
ccactgccaggcactatttgccaaggtacccagcaaagccatcaagctctcaagcttgtg
ctggagtcatcagcggcaggaaccgctccagtagcagaagccagctcacatccagctata
ctcagcccagacttcctaacggtatcacatcataaaaccatcgtgcatctggcacatatt
taa