GENSCAN 1.0	Date run:  4-Nov-116	Time: 06:04:45

Sequence gi568815589f:104469168_104670127 : 200960 bp : 36.89% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    732    727    6                               1.05
 1.04 Term -   2642   2568   75  2  0   79   44    76 0.372  -0.84
 1.03 Intr -   4486   4382  105  1  0   73   75    90 0.359   5.69
 1.02 Intr -   9334   9202  133  0  1   46  119    14 0.330   0.03
 1.01 Init -  26783  26590  194  2  2   67   60   168 0.360  10.39
 1.00 Prom -  32360  32321   40                              -3.75

 2.00 Prom +  33309  33348   40                              -8.95
 2.01 Init +  35414  35983  570  1  0   73   52   333 0.010  23.33
 2.02 Intr +  51840  52008  169  2  1   29   71   147 0.031   5.70
 2.03 Term +  53687  53853  167  0  2   21   38   125 0.082  -2.10
 2.04 PlyA +  54555  54560    6                               1.05

 3.02 PlyA -  54710  54705    6                               1.05
 3.01 Sngl -  57691  57086  606  1  0   87   44   205 0.427  11.94
 3.00 Prom -  58567  58528   40                              -4.95

 4.02 PlyA -  60508  60503    6                               1.05
 4.01 Sngl -  67205  66603  603  2  0   87   39   314 0.384  22.34
 4.00 Prom -  72447  72408   40                              -3.45

 5.00 Prom +  86530  86569   40                              -3.75
 5.01 Sngl + 100352 100963  612  1  0   99   42   420 0.802  34.44
 5.02 PlyA + 101435 101440    6                               1.05

 6.00 Prom + 116183 116222   40                              -3.75
 6.01 Init + 121580 121732  153  1  0   72   42    95 0.619   3.33
 6.02 Term + 123202 123363  162  0  0   14   48   214 0.941   6.95
 6.03 PlyA + 125437 125442    6                               1.05

 7.03 PlyA - 125553 125548    6                               1.05
 7.02 Term - 130100 129290  811  1  1   17   36   355 0.004  14.86
 7.01 Init - 136361 135508  854  2  2   38   89   510 0.027  40.26
 7.00 Prom - 138538 138499   40                              -6.95

 8.02 PlyA - 138686 138681    6                               1.05
 8.01 Sngl - 148719 148081  639  0  0   83   42   318 0.553  22.63
 8.00 Prom - 153762 153723   40                              -7.65

 9.00 Prom + 154058 154097   40                              -3.65
 9.01 Init + 155323 155533  211  0  1   68   57   144 0.551   8.29
 9.02 Term + 155993 156534  542  0  2   32   38   251 0.520   7.93
 9.03 PlyA + 157268 157273    6                               1.05

10.02 PlyA - 157423 157418    6                               1.05
10.01 Sngl - 165276 165061  216  0  0   68   53   253 0.942  14.72
10.00 Prom - 180458 180419   40                              -4.05

11.03 PlyA - 181443 181438    6                               1.05
11.02 Term - 187791 187614  178  2  1   65   48   167 0.270   6.58
11.01 Init - 192034 191925  110  1  2   23   84    85 0.302   1.34

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 165977 165724  254  0  2    7   48   242 0.851   6.92


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:104469168_104670127|GENSCAN_predicted_peptide_1|168_aa
MSKKNVQGTKSKRWGHKLHQKAVCSVKQEHGAKPRRLEVMGHKIQPTKDSNRQTKAYIGE
KSNHWIWRENKSGLDSFGTQKLFPVPWGMEVARTVGWGSLDFDRHQNDLAALNVAKGYRY
ELVFAKILDFEIHRVPFEDLWTVEGLQSSSETSVGHPVKLIAIGSQAT

>gi568815589f:104469168_104670127|GENSCAN_predicted_CDS_1|507_bp
atgtctaagaaaaatgttcaaggaacaaagtcaaagaggtggggccacaaacttcatcaa
aaggcggtttgcagtgtgaagcaggaacacggagcaaagccaaggcgtctggaagtcatg
ggacacaagatccaaccaacaaaagattcaaatcgtcagacgaaggcctatattggtgaa
aaaagtaaccattggatttggagagaaaataaaagtgggctggactcttttggaacccag
aaacttttccctgtcccctggggcatggaggtggcaagaactgtggggtggggttcattg
gattttgataggcatcaaaatgacctggctgcacttaacgttgcaaagggctacaggtat
gagctggtatttgctaagatcttggattttgaaattcatagagttccatttgaggatcta
tggactgtggagggcctacaaagcagctcagaaaccagtgttggtcacccagtcaaattg
attgctattggcagccaagctacatga

>gi568815589f:104469168_104670127|GENSCAN_predicted_peptide_2|301_aa
MGSTECVLLPMMAYDRYVAICNPLRYPVIMNRRTCVQIAAGSWMTGCLTAMVEMMSVLPL
SLCGNSIINHFTCEILAILKLVCVDTSLVQLIMLVISVLLLPMPMLLICISYAFILASIL
RISSVEGRSKAFSTCTAHLMVVVLFYGTALSMHLKPSAVDSQEIDKFMALVYAGQTPMLN
PIIYSLRNKEPPLVIPRQTGSGVDLQQTPADLQQRGLTVGRKTNKQKGIAHPLRDPIRRS
PTSKTKEKGNLHRKLRLKAAVKTTGDVQQGYAVLGHVRRIHRKRNKKDCNRFTEEFKLTG
M

>gi568815589f:104469168_104670127|GENSCAN_predicted_CDS_2|906_bp
atgggctccactgagtgtgtgctcctgcccatgatggcatatgaccggtatgtggccatc
tgcaaccccctgagataccctgtcatcatgaataggagaacctgtgtgcagattgcagct
ggctcctggatgacaggctgtctcactgccatggtggaaatgatgtctgtgctgccactg
tctctctgtggtaatagcatcatcaatcatttcacttgtgaaattctggccatcttgaaa
ttggtttgtgtggacacctccctggtgcagttaatcatgctggtgatcagtgtacttctt
ctccccatgccaatgctactcatttgtatctcttatgcatttatcctcgccagtatcctg
agaatcagctcagtggaaggtcgaagtaaagccttttcaacgtgcacagcccacctgatg
gtggtagttttgttctatgggacggctctctccatgcacctgaagccctccgctgtagat
tcacaggaaatagacaaatttatggctttggtgtatgccggacaaacccccatgttgaat
cctatcatctatagtctacggaacaaagagcctccgctggtgatacccaggcaaacaggg
tctggggtggaccttcagcaaactccagcagacctgcagcagaggggcttgactgttgga
aggaaaactaacaaacagaaaggaatagcacatccactcagagaccccatccgaaggtca
ccaacatcaaagaccaaagaaaaaggaaatttacataggaaattaaggctaaaagcagct
gtaaaaacgactggtgatgtgcagcaaggatatgctgtgcttggccatgtcagaagaatc
cacagaaaaagaaacaaaaaggattgtaataggtttactgaagagtttaaactcactgga
atgtaa

>gi568815589f:104469168_104670127|GENSCAN_predicted_peptide_3|201_aa
MAFDRYVAICNPLRYPIIMNKVVYVLLTSVSWLSGGINSTVQTSLAMRWPFCGNNIINHF
LCEILAVLKLACSDISVNIVTLAVSNIAFLVLPLLVIFFSYMFILYTILRTNSATGRHKA
FSTCSAHLTVVIIFYGTIFFMYAKPKSQDLLGKDNLQATEGLVSMFYGVVTPMLNPIIYS
LRNKDVKAAIKYLLSRKAINQ

>gi568815589f:104469168_104670127|GENSCAN_predicted_CDS_3|606_bp
atggcatttgatcgttatgtggccatctgtaaccctctgagataccccatcatcatgaac
aaggtggtgtatgtactgctgacttctgtatcatggctttctggtggaatcaattcaact
gtgcaaacatcacttgccatgcgatggcctttctgtgggaacaatattattaatcatttc
ttatgcgagatcttagctgtcctaaaattagcttgttctgatatatctgtcaatattgtt
accctagcagtgtcaaatattgctttcctagttcttcctctgctcgtgatttttttctcc
tatatgttcatcctctacaccatcttgcgaacgaactcggccacaggaagacacaaggca
ttttctacatgctcagctcacctgactgtggtgatcatattttatggtaccatcttcttt
atgtatgcaaaacctaagtcccaggacctccttgggaaagacaacttgcaagctacagag
gggcttgtttccatgttttatggggttgtgacccccatgttaaaccccataatctatagc
ttgagaaataaagatgtaaaagctgctataaaatatttgctgagcaggaaagctattaac
cagtaa

>gi568815589f:104469168_104670127|GENSCAN_predicted_peptide_4|200_aa
MAFDRYVAICNPLRYPIILSKVAYVLMASVSWLSGGINSAVQTLLAMRLPFCGNNIINHF
ACEILAVLKLACADISLNIITMVISNMAFLVLPLMVIFFSYMFILYTILQMNSATGRRKA
FSTCSAHLTVVIIFYGTIFFMYAKPKSQDLIGEEKLQALDKLISLFYGVVTPMLNPILYS
LRNKDVKAAVKYLLNKKPIH

>gi568815589f:104469168_104670127|GENSCAN_predicted_CDS_4|603_bp
atggcatttgatcgttatgtggccatctgcaacccactgagataccccatcatcctgagc
aaggtggcgtatgtattgatggcttctgtgtcctggctgtccggtggaataaattcagct
gtgcaaacattacttgccatgagactgcctttctgtgggaataatattatcaatcatttc
gcatgtgaaatattagctgtcctcaagctggcctgtgctgatatatccctcaatattatc
accatggtgatatcaaatatggccttcctggttcttccactgatggtcatttttttctcc
tatatgttcatcctctacaccatcttgcaaatgaattcagccacaggaagacgcaaggca
ttttccacgtgctcagctcacctgactgtggtgatcatattttacggtaccatcttcttt
atgtatgcgaaaccgaagtctcaagacctgattggggaagaaaaattgcaagcattagac
aagctcatttctctgttttatggggtagtgacacccatgctgaatcctatactctatagc
ttgagaaataaggatgtaaaagctgctgtaaaatatttgctgaacaaaaaaccaattcac
taa

>gi568815589f:104469168_104670127|GENSCAN_predicted_peptide_5|203_aa
MALDRYVAICYPLRYPVIMSKGAYVAMAAGSWVTGLVDSVVQTAFAMQLPFCANNVIKHF
VCEILAILKLACADISINVISMTGSNLIVLVIPLLVISISYIFIVATILRIPSTEGKHKA
FSTCSAHLTVVIIFYGTIFFMYAKPESKASVDSGNEDIIEALISLFYGVMTPMLNPLIYS
LRNKDVKAAVKNILCRKNFSDGK

>gi568815589f:104469168_104670127|GENSCAN_predicted_CDS_5|612_bp
atggcactggaccgctatgtggccatctgctacccactgagataccctgtcatcatgagc
aagggtgcctatgtggccatggcagctgggtcctgggtcactgggcttgtggactcagta
gtgcagacagcttttgcaatgcagttaccattctgtgctaataatgtcattaaacatttt
gtctgtgaaattctggctatcttgaaactggcctgtgctgatatttcaatcaatgtgatt
agtatgacagggtcgaatctgattgttctggttattccattgttagtaatttccatctct
tacatatttattgttgccactattctgaggattccttccactgaaggaaaacataaggcc
ttctccacctgctcagcccacctgacagtggtgattatattctatggaaccatcttcttc
atgtacgcaaagcctgagtctaaagcctctgttgattcaggtaatgaagacatcattgag
gccctcatctcccttttctatggagtgatgactcccatgcttaatcctctcatctatagt
ctgcgaaacaaggatgtaaaggctgctgtcaaaaacatactgtgtaggaaaaacttttct
gatggaaaatga

>gi568815589f:104469168_104670127|GENSCAN_predicted_peptide_6|104_aa
MTVVIVFYGTILFMYMKAKSKDSAFDKLIALFYGIVTPMLNPIIYSLRNTEYDVLEPVQN
KEDVNVEERLSSGCQSPSSMKGAYTQEEGVDPSTWLRTTHAKKS

>gi568815589f:104469168_104670127|GENSCAN_predicted_CDS_6|315_bp
atgacagtggtgattgtgttttatgggacaatcctcttcatgtacatgaaggcaaagtcc
aaagactctgcttttgacaaactgattgccctgttctatggcatagtcacccccatgctc
aatcctatcatctatagcctgaggaatacagagtatgatgttttggagcctgtccagaat
aaggaagatgtcaacgtggaagagaggctcagttcagggtgtcaaagtccaagcagcatg
aaaggagcatacacacaagaggaaggtgtggatcctagcacctggttgaggaccactcat
gcaaagaaaagctga

>gi568815589f:104469168_104670127|GENSCAN_predicted_peptide_7|554_aa
MYVVILLGNGTLILISILDPHLHTPMYFFLGNLSFLDICYTTTSIPSTLVSFLSERKTIS
LSGCAVQMFLGLAMGTTECVLLGMMAFDRYVAICNPLRYPIIMSKDAYVPMAAGSWIIGA
VNSAVQSVFVVQLPFCRNNIINHFTCEILAVMKLACADISDNEFIMLVATTLFILTPLLL
IIVSYTLIIVSIFKISSSEGRSKASSTCSAHLTVVIIFYGTILFMYMKPKSKETLNSDDL
DATDKIISMFYGVMTPMMNPLIYSLRNKDVKEAVKHLLNRRFFSNILDPHLHTPMYFFLG
NLSFLDICYTTTSIPSTLVSFLSERKTISLSGCAVQMFLSLAMGTTECVLLGVMAFDRYV
AICNPLRYPIIMSKDAYVPMAAGSWIIGAVNSAVQTVFVVQLPFCRNNIINHFTCEILAV
MKLACADISGNEFILLVTTTLFLLTPLLLIIVSYTLIILSIFKISSSEGRSKPSSTCSAR
LTVVITFCGTIFLMYMKPKSQETLNSDDLDATDKLIFIFYRVMTPMMNPLIYSLRNKDVK
EAVKHLLRRKNFNK

>gi568815589f:104469168_104670127|GENSCAN_predicted_CDS_7|1665_bp
atgtatgtggtcatccttctggggaatggtactctcattttaatcagcatcttggaccct
caccttcacacccctatgtacttctttctggggaacctctccttcttggacatctgctac
accaccacctctattccctccacgctagtgagcttcctttcagaaagaaagaccatttcc
ctttctggctgtgcagtgcagatgttcctcggcttggccatggggacaacagagtgtgtg
cttctgggcatgatggcctttgaccgctatgtggctatctgcaaccctctgagatatccc
atcatcatgagtaaggatgcctatgtacccatggcagctgggtcctggatcataggagct
gtcaattctgcagtacaatcagtgtttgtggtacaattgcctttctgcaggaataacatc
atcaatcatttcacctgtgaaattctggctgtcatgaaactggcctgtgctgacatctca
gacaatgagttcatcatgcttgtggccacaacattgttcatattgacacctttgttatta
atcattgtctcttacacgttaatcattgtgagcatcttcaaaattagctcttccgagggg
agaagcaaagcttcctctacctgttcagcccatctgactgtggtcataatattctatggg
accatcctcttcatgtacatgaagcccaagtctaaagagacacttaattcggatgacttg
gatgctaccgacaaaattatatccatgttctatggggtgatgactcccatgatgaatcct
ttaatctacagtcttagaaacaaggatgtgaaagaggcagtaaaacacctactgaacaga
aggttctttagcaacatcttggaccctcaccttcacacccctatgtacttctttctgggg
aacctctccttcttggacatctgctacaccaccacctctattccctccacgctagtgagc
ttcctttcagaaagaaagaccatttccctttctggctgtgcagtgcagatgttcctcagc
ttggccatggggacaacagagtgtgtgcttctgggcgtgatggcctttgaccgctatgtg
gctatctgcaaccctctgagatatcccatcatcatgagtaaggatgcctatgtacccatg
gcagctgggtcctggatcataggagctgtcaattctgcagtacaaacagtgtttgtggta
caattgcctttctgcaggaataacatcatcaatcatttcacctgtgaaattctagctgtc
atgaaactggcctgtgctgacatctcaggcaatgagttcatcctgcttgtgaccacaaca
ttgttcctattgacacctttgttattaattattgtctcttacacgttaatcattttgagc
atcttcaaaattagctcttcggaggggagaagcaaaccttcctctacctgctcagctcgt
ctgactgtggtgataacattctgtgggaccatcttcctcatgtacatgaagcccaagtct
caagagacacttaattcagatgacttggatgccactgacaaacttatattcatattctac
agggtgatgactcccatgatgaatcctttaatctacagtcttagaaacaaggatgtgaag
gaggcagtaaaacacctactgagaagaaaaaattttaacaagtaa

>gi568815589f:104469168_104670127|GENSCAN_predicted_peptide_8|212_aa
MGTTECVLLGMMAFDRYVAICNPLRYPIIMSKNAYVPMAVGSWFAGIVNSAVQTTFVVQL
PFCRKNVINHFSCEILAVMKLACADISGNEFLMLVATILFTLMPLLLIVISYSLIISSIL
KIHSSEGRSKAFSTCSAHLTVVIIFYGTILFMYMKPKSKETLNSDDLDATDKIISMFYGV
MTPMMNPLIYSLRNKDVKEAVKHLPNRRFFSK

>gi568815589f:104469168_104670127|GENSCAN_predicted_CDS_8|639_bp
atggggacaacagagtgtgtgcttctgggcatgatggcctttgaccgctatgtggctatc
tgcaaccctctgagatatcccatcatcatgagcaagaatgcctatgtacccatggctgtt
gggtcctggtttgcagggattgtcaactctgcagtacaaactacatttgtagtacaattg
cctttctgcaggaagaatgtcatcaatcatttctcatgtgaaattctagctgtcatgaag
ttggcctgtgctgacatctcaggcaatgagttcctcatgcttgtggccacaatattgttc
acattgatgccactgctcttgatagttatctcttactcattaatcatttccagcatcctc
aagattcactcctctgaggggagaagcaaagctttctctacctgctcagcccatctgact
gtggtcataatattctatgggaccatcctcttcatgtatatgaagcccaagtctaaagag
acacttaattcagatgacttggatgctaccgacaaaattatatccatgttctatggggtg
atgactcccatgatgaatcctttaatctacagtcttagaaacaaggatgtgaaagaggca
gtaaaacacctaccgaacagaaggttctttagcaagtga

>gi568815589f:104469168_104670127|GENSCAN_predicted_peptide_9|250_aa
MWKRLWNWVTGRRWKSLEGSEEDRKMWESLELPTDLLNGFTQNVDSNMDNKVQAEVVSDG
DEKLVGSWSKAAPDVAKRGQCRARAMASEGVSLKPQKLPHGVEPASAPKSRIGVWKPLPR
LQKMYGNTWMSRQKFAAGMGCSWRTSDRAVQEGKVGLEPPHRVPTGALPSGAVRRGPPPS
RLQNGRSTNSLHHLPGKATDTQYQPVKVAEKEAVLCKATGSELPKTMGMHFLHQCDLDMR
PESKEIILEL

>gi568815589f:104469168_104670127|GENSCAN_predicted_CDS_9|753_bp
atgtggaagcgactttggaactgggtaacaggcagaagatggaagagtttggagggctca
gaagaagacaggaaaatgtgggaaagtttagaacttcctacagacttgctgaatggcttt
acccaaaatgttgatagcaatatggataataaggtccaggctgaggtggtctcagatgga
gatgagaaacttgttgggagctggagcaaagctgctccagatgtggctaaaaggggccaa
tgcagagctcgggccatggcttcagagggggtaagcctcaagcctcagaagcttccacat
ggtgttgagcctgcaagtgcaccgaagtcaagaattggggtttggaaacctctacctaga
cttcagaagatgtatggaaacacctggatgtccaggcagaagtttgctgcagggatgggg
tgctcatggagaacttctgatagggcagtgcaggagggaaaagtggggttggaaccccca
cacagagtccctactggggcactgcctagtggagctgtgagaagagggccaccaccctcc
agactccagaatggtagatctaccaacagcttgcaccatttgcctggaaaagccacagac
actcaataccagcctgtgaaagtagctgagaaggaggctgtactctgcaaagccacaggg
tcagagctgcccaagaccatgggaatgcacttcttgcatcagtgtgacctggatatgaga
ccagagtcaaaggagatcattttggagctttaa

>gi568815589f:104469168_104670127|GENSCAN_predicted_peptide_10|71_aa
MPVFTELQAAEPERAVTFPGGSDLGTPRAKAVTSLGGLRLLASPSFRVPPPRLDASAQHG
SCCGTLSPAAG

>gi568815589f:104469168_104670127|GENSCAN_predicted_CDS_10|216_bp
atgcccgtgttcactgagctgcaggcggcagaaccagagagagctgtaacatttcctggg
ggctcagacctcgggactcccagagcaaaagctgtaacatcccttgggggtctgcggttg
ctggcatctccaagttttcgggtgccaccacctcgtctagacgccagtgcccaacacgga
agctgctgtggcacgctgagtccagccgcaggctga

>gi568815589f:104469168_104670127|GENSCAN_predicted_peptide_11|95_aa
MSSNAQRSGSHTLSNACKWLELTVMLVGAIRLGLNAITILFMYAKPKAKDSSGADKEQVT
DKIISLFYGVVTPMLNPLIYSLRNKDVKAAVKSIL

>gi568815589f:104469168_104670127|GENSCAN_predicted_CDS_11|288_bp
atgagtagtaatgcccagagatctgggtctcatactctctccaatgcctgcaagtggttg
gaactgacagtgatgctggttggggcaatcaggcttggactgaatgccataaccatcctt
ttcatgtatgcaaagcccaaggctaaagactcttctggtgcagacaaagaacaagtcaca
gacaaaatcatctccctgttctatggagtggtgacacctatgcttaatcctcttatctat
agtttgaggaacaaagacgtgaaggcagctgtgaagagtatactgtga