GENSCAN 1.0	Date run:  4-Nov-116	Time: 06:02:47

Sequence gi568815595r:128473283_128673729 : 200447 bp : 48.98% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.13 PlyA -   1668   1663    6                               1.05
 1.12 Term -   8036   7737  300  2  0   74   50   286 0.983  18.62
 1.11 Intr -   8662   8537  126  1  0   77   82   165 0.999  15.68
 1.10 Intr -  10723  10578  146  2  2  112   62   210 0.997  20.80
 1.09 Intr -  12735  12445  291  1  0   49  103   335 0.487  28.21
 1.08 Intr -  13086  12880  207  1  0  138   27    60 0.523   3.95
 1.07 Intr -  13794  13521  274  0  1  118  101   378 0.998  39.21
 1.06 Intr -  15586  15493   94  0  1   96   62    66 0.099   4.77
 1.05 Intr -  17523  17445   79  1  1   52   81    36 0.124  -2.09
 1.04 Intr -  18739  18503  237  2  0   -1   97   142 0.261   3.79
 1.03 Intr -  22288  22209   80  0  2   96   66    61 0.079   3.89
 1.02 Intr -  31453  31278  176  1  2   93   90    73 0.403   6.74
 1.01 Init -  31658  31629   30  2  0   83   44    24 0.085  -2.74
 1.00 Prom -  32121  32082   40                              -5.56

 2.00 Prom +  32407  32446   40                             -11.92
 2.01 Init +  34144  34351  208  0  1   90   75   143 0.317  12.23
 2.02 Intr +  35476  35687  212  2  2   38  -20   222 0.203   5.03
 2.03 Intr +  49836  50006  171  2  0   99   69    41 0.595   3.44
 2.04 Term +  50081  50221  141  1  0  130   55    41 0.597   2.93
 2.05 PlyA +  51693  51698    6                               1.05

 3.00 Prom +  57774  57813   40                              -7.16
 3.01 Init +  60836  60994  159  1  0   86   88    64 0.432   6.02
 3.02 Term +  64819  65016  198  0  0   23   34   290 0.971  14.50
 3.03 PlyA +  66005  66010    6                               1.05

 4.04 PlyA -  66327  66322    6                               1.05
 4.03 Term -  67933  67760  174  1  0   76   44    69 0.220  -0.94
 4.02 Intr -  73551  73397  155  1  2   31   96    82 0.258   3.09
 4.01 Init -  74385  74313   73  0  1  104   17   130 0.316   6.73
 4.00 Prom -  75939  75900   40                              -5.96

 5.15 PlyA -  79854  79849    6                               1.05
 5.14 Term -  81987  81919   69  0  0   92   52    59 0.747   0.64
 5.13 Intr -  82512  82451   62  1  2  110   90    58 0.801   6.65
 5.12 Intr -  82767  82631  137  2  2   31   80    77 0.523   1.41
 5.11 Intr -  85231  85127  105  0  0   18   91    77 0.241   0.33
 5.10 Intr -  90037  89936  102  0  0   74   66    46 0.051   0.29
 5.09 Intr -  94959  94811  149  0  2   85   19    92 0.195   1.03
 5.08 Intr -  97316  97239   78  2  0   87   56    90 0.507   5.45
 5.07 Intr - 100357 100214  144  1  0   79   81    23 0.295   1.18
 5.06 Intr - 102570 102533   38  1  2   72   99    26 0.270   0.08
 5.05 Intr - 103706 103618   89  1  2  109   47    63 0.337   3.91
 5.04 Intr - 110973 110820  154  1  1   87   66    57 0.143   2.53
 5.03 Intr - 131000 130977   24  0  0  143   75    13 0.559   3.50
 5.02 Intr - 135025 134720  306  2  0   -8   36   218 0.177   3.42
 5.01 Init - 139803 139683  121  0  1   79   80    90 0.315   5.68
 5.00 Prom - 140514 140475   40                              -5.86

 6.03 PlyA - 141132 141127    6                               1.05
 6.02 Term - 144777 144302  476  1  2   81   48   176 0.087   7.95
 6.01 Init - 145870 145735  136  1  1   83  100    11 0.116   2.12
 6.00 Prom - 146819 146780   40                              -6.76

 7.11 PlyA - 146914 146909    6                              -0.45
 7.10 Term - 147311 147129  183  2  0   77   41   425 0.999  34.24
 7.09 Intr - 149127 148882  246  0  0  116   89   313 0.999  31.86
 7.08 Intr - 152371 152252  120  1  0  112   81   313 0.999  33.69
 7.07 Intr - 152730 152592  139  2  1   92   89   203 0.994  21.27
 7.06 Intr - 153550 153451  100  2  1   81   89   152 0.999  13.77
 7.05 Intr - 156837 156669  169  0  1   65   52   169 0.847  10.52
 7.04 Intr - 158875 158666  210  1  0  121   86   194 0.999  21.61
 7.03 Intr - 164823 164517  307  2  1  104  115   310 0.999  31.75
 7.02 Intr - 171701 171637   65  2  2  111  121    79 0.998  11.02
 7.01 Init - 177518 177258  261  2  0   89  109   480 0.999  45.26

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:128473283_128673729|GENSCAN_predicted_peptide_1|679_aa
MPVTTRTLSVALLGGSKDGHRSSQCHMTPAGGQSPRILAKFPGWTLHGSSRVMCPESISQ
DGSDWLGQRQTESARANGTLELHWRPALLVKEGLDGRIREPGRARAAAEASGERFPAGLT
NCRQIVPNETDLPVVRPPAPAAPNKPWLFVEEGEARPDCLRVSAGFRGEPARLEGLEQRL
KTPADSGGCVDPPREFVWGPSLYNGREEDLCARPTRTIEPISGLEVSGEHFQGRCRLHPD
PEPPPPAMEVAPEQPRWMAHPAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLD
SQGNPYYANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHH
NPWTVSPFSKTPLHPSAAGGPGGPLSVYPGAGASSSAGGSAARGEDKDGVKYQVSLTESM
KMESGSPLRPGLATMGTQPATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPASSFTPK
QRSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSA
ARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMS
NKSKKSKKGAECFEELSKCMQEKSSPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHP
SSSLSFGHPHPSSMVTAMG

>gi568815595r:128473283_128673729|GENSCAN_predicted_CDS_1|2040_bp
atgcctgtgaccaccaggactctttcagttgctctcctgggtggcagtaaagatggccac
cgcagctcccagtgccacatgaccccagcaggagggcagtccccgaggattcttgccaag
tttccaggttggactctccatggatcctccagagtcatgtgcccagaatcaatcagccag
gatggctctgactggctgggccagagacagacagaaagtgcccgagcaaatggtacccta
gagctccactggcggcctgccctgctggttaaggaaggtctggatggcaggattcgagaa
ccaggtagggcccgtgcggcagccgaggcgtctggggagcgtttcccagccgggctgaca
aattgcagacaaattgtgcctaacgaaacggatttaccagttgtcaggccgccggccccg
gccgctccaaataaaccgtggctgttcgtggaggagggagaagcacggcccgattgtctc
cgggtctcagcagggttccgcggggagcctgccaggcttgaaggcctggaacagcgcctc
aagaccccagcagattctgggggctgcgttgaccctccccgggagtttgtttggggccca
agtctgtacaatgggagggaggaagacttgtgcgcccggcccacacgaaccatagagccg
atctccgggctagaagtgagtggggagcacttccagggccgttgccgtctgcacccagac
cctgagccgccgccgccggccatggaggtggcgcccgagcagccgcgctggatggcgcac
ccggccgtgctgaatgcgcagcaccccgactcacaccacccgggcctggcgcacaactac
atggaacccgcgcagctgctgcctccagacgaggtggacgtcttcttcaatcacctcgac
tcgcagggcaacccctactatgccaaccccgctcacgcgcgggcgcgcgtctcctacagc
cccgcgcacgcccgcctgaccggaggccagatgtgccgcccacacttgttgcacagcccg
ggtttgccctggctggacgggggcaaagcagccctctctgccgctgcggcccaccaccac
aacccctggaccgtgagccccttctccaagacgccactgcacccctcagctgctggaggc
cctggaggcccactctctgtgtacccaggggctggggcctcatcttccgcggggggtagt
gcagcccgaggagaggacaaggacggcgtcaagtaccaggtgtcactgacggagagcatg
aagatggaaagtggcagtcccctgcgcccaggcctagctactatgggcacccagcctgct
acacaccaccccatccccacctacccctcctatgtgccggcggctgcccacgactacagc
agcggactcttccaccccggaggcttcctggggggaccggcctccagcttcacccctaag
cagcgcagcaaggctcgttcctgttcagaaggccgggagtgtgtcaactgtggggccaca
gccacccctctctggcggcgggacggcaccggccactacctgtgcaatgcctgtggcctc
taccacaagatgaatgggcagaaccgaccactcatcaagcccaagcgaagactgtcggcc
gccagaagagccggcacctgttgtgcaaattgtcagacgacaaccaccaccttatggcgc
cgaaacgccaacggggaccctgtctgcaacgcctgtggcctctactacaagctgcacaat
gttaacaggccactgaccatgaagaaggaagggatccagactcggaaccggaagatgtcc
aacaagtccaagaagagcaagaaaggggcggagtgcttcgaggagctgtcaaagtgcatg
caggagaagtcatcccccttcagtgcagctgccctggctggacacatggcacctgtgggc
cacctcccgcccttcagccactccggacacatcctgcccactccgacgcccatccacccc
tcctccagcctctccttcggccacccccacccgtccagcatggtgaccgccatgggctag

>gi568815595r:128473283_128673729|GENSCAN_predicted_peptide_2|243_aa
MQPGLGLCLPLPSMHSNCGKTCAKYMDATNHWQRNRKHIPVARQMRGDGFIHILQEEIKL
IDRSKCEWTGGLNRGADNIQTSTQASLPATAVPFSNGLCRRGCKMVAAAPTPAPFCGQVQ
WEECEVFFQKLLQILISFSWRFLTSGWEHHKAMWITLIPGTMGPKCLWTNVWTNAPRALM
LSGDSQALSTGHSQLSVVAMGPPVLRTSSGAPPPMPPGTMLSFPRVSAGPFQACGLCGIQ
PVD

>gi568815595r:128473283_128673729|GENSCAN_predicted_CDS_2|732_bp
atgcagccagggctggggctctgcttgccattgccctctatgcactctaactgtggcaaa
acctgtgcaaagtacatggatgctaccaaccactggcaaaggaataggaagcatattcct
gtggcccggcaaatgcgtggggatggcttcatccacatcctgcaggaagaaattaaatta
attgacaggtccaaatgtgagtggacaggtggccttaatcggggtgctgacaacatccag
acgagcacgcaggcttctctccctgccacggcggtgccattctccaacggactctgccgc
cgtggctgcaagatggtggcagcagctccaacccctgcacccttttgtggccaagtccag
tgggaagaatgtgaggtcttcttccagaagcttctgcagattctcattagcttcagctgg
agattcctcacttctggttgggaacaccacaaagccatgtggatcaccctcatccctgga
acgatggggcccaaatgcctatggacaaatgtgtggacaaatgccccccgggctctgatg
ctctctggagacagccaagccctaagcactggccattcacagctctctgtggtggctatg
ggtccacctgtcctccggactagctctggagccccccctcccatgcctcctggaacaatg
ctgagcttcccccgtgtgtctgcaggtcctttccaggcttgtggcctgtgtgggatccag
cctgtggactga

>gi568815595r:128473283_128673729|GENSCAN_predicted_peptide_3|118_aa
MMRRRDHEFNSGYSKFEMPVWHYTVQEMMQYRGLKYRRGAYTSDQDLKIINKEFLHEEIH
KDLLVMGAYEISNKSGGAGSLHSHLKVTDSAGHILYSKEDATKGKFAFILEDYDMFEV

>gi568815595r:128473283_128673729|GENSCAN_predicted_CDS_3|357_bp
atgatgagaaggagagatcatgagttcaactctgggtattccaaatttgagatgcctgtg
tggcattacactgttcaggaaatgatgcagtatcgaggtctgaagtacaggagaggagcc
tacacttcagaccaagatttgaaaattatcaacaaagagttcctccatgaggagatccac
aaggacctgctagtgatgggtgcgtacgagatctccaacaagtctgggggtgctggcagc
ctgcacagccacctcaaggtcacagattctgctggccacattctctactccaaagaggat
gcaaccaaagggaaatttgcctttatcctggaagattatgacatgtttgaagtgtga

>gi568815595r:128473283_128673729|GENSCAN_predicted_peptide_4|133_aa
MGAALLLLRLIWTLVMAGLSQHVGASQLPDMRVRLSWLVQPPAVYRHMKELSRNQSRLPR
TQEPFSCSTELRAKQKEPFRGASLVLGPGPSSGATVLPDMSLLSTSGGESQPVLESPSMA
PHGCIAKKKQKCV

>gi568815595r:128473283_128673729|GENSCAN_predicted_CDS_4|402_bp
atgggggccgccttgctcctgttgagactgatttggaccttagtcatggctggcctgagt
cagcacgtgggagccagccaattgccagatatgcgagtgaggttatcctggcttgttcag
ccaccagctgtctataggcacatgaaagagctcagcaggaatcagtccaggttacccaga
acacaagaaccgttcagctgctccacagaactgcgagcaaaacaaaaggagccattcagg
ggtgcatccttagttctaggccctggaccaagctctggggctacagtattgccagatatg
tcccttctttctacaagtggaggtgaaagtcagccagtcctggaaagccccagcatggct
ccacatggatgcattgccaagaagaagcagaagtgtgtgtga

>gi568815595r:128473283_128673729|GENSCAN_predicted_peptide_5|525_aa
MSLALGIQSGVGRVPATGTLCSPQRCLQSGNDKEPVHALPAGGDGNPRPHALAAPGCPAG
RQLPVQETQPREGRRKVPRLRGAQRGLAPDDRLRNGLLPRVSRSLQRPKSPADLEHLQAL
GRGPGAIPAALAWELRLLVVAPGVQSPAGAGPFPSTGREPSRTINNDYKTNSLVTNDGSL
QVFTLRRSTPLRKKLNNEASLRKHSACCLGGPEDTGWVPVVEVPGQHLHIADVLPVEGDP
QMTQGPPDSQPLGTLGQGGWKLLGIVGSLAPETLGGLGTEFGPCTHPLPFDMYPVAIKVA
PNGSQAMTKLNIGTGILQQALSWGHAAPRPQQPAHIAALILQNGPSSCNGLAGQQSAIAK
GKDSGAWSTIFTLMTSKWIIFSPNFSPDSRLINPTADSSIVRSLGQQQDGSSHGEAEEST
PAQEASGSPHQGSEMDRQPARPQEMGGFREAPQLELTQPVQLDLAQFPGGSRGGGRWGDC
GAGPMALAALPSENKASCRNSGRMRLFPMPLLRLALRGKHPESGP

>gi568815595r:128473283_128673729|GENSCAN_predicted_CDS_5|1578_bp
atgtccctggccctggggatacagtcgggagtgggcagagtccccgccacagggaccttg
tgcagcccacagagatgcctgcagagtggaaatgataaggagcccgttcacgctctgcca
gccgggggtgacgggaacccacgtcctcacgccctggctgctcccggctgccccgcgggc
cggcagcttcccgttcaggaaactcagcctcgggaagggcggagaaaggtcccgcggctg
cgaggagcccagcggggcttggcgcctgatgaccggctccggaacgggctgttaccccgc
gtatctcggtctctgcagcggccaaagtcgcccgctgacctggagcacctgcaggccctg
ggcagaggacccggggccattcccgcagccctggcctgggagctccggcttctagtggtg
gctccgggtgtccagagcccggctggcgcagggcccttcccctccacggggagagagcct
tctagaaccataaacaatgactacaagacaaacagccttgtgaccaatgatgggagcttg
caagtgtttacactgcgtagatcaacacctttaagaaaaaaacttaacaatgaagcaagt
cttaggaagcacagtgcctgctgcctgggggggcctgaagacacaggatgggtccccgtt
gtggaggtgcccgggcagcacctgcatatagcagatgtgcttcctgtggaaggagacccc
cagatgacacagggacccccagactctcagcccctaggcaccctgggccagggtggttgg
aagcttctaggcattgtggggtctctggcaccagagacactcgggggtctggggaccgag
tttgggccctgtacccacccactaccatttgacatgtatcctgtggccattaaagtcgca
ccgaatggctctcaggccatgaccaaactgaacattgggactggaattttgcagcaagcc
ctcagctggggccatgctgccccccgcccccaacagccagcacacatcgctgctttgatt
ctgcaaaatggaccaagcagctgcaatggacttgccggacagcagagcgcaattgccaaa
ggcaaggactctggagcgtggagcaccatcttcacactgatgacttccaaatggattatc
ttcagccccaatttctcccctgactccaggctcataaatccaactgccgactccagcatt
gtcagaagcctggggcaacagcaagacggcagcagccatggcgaggcagaagagtcaacg
ccagcccaggaagcatcaggaagtccacatcaggggagtgagatggacagacagcctgca
cggccgcaggaaatgggtggcttccgcgaagccccccagctggagttgacacagcctgtc
cagctggacctggcccagtttccaggcggctccaggggcggggggcgctggggggactgt
ggcgccggtccgatggctctagcagcgctgccatctgagaacaaagcgtcctgcaggaat
tccggccggatgaggctctttcccatgccccttctgcggctggctctgcgcggaaagcat
cctgaatccggcccctga

>gi568815595r:128473283_128673729|GENSCAN_predicted_peptide_6|203_aa
MAKWRCSGHPSGSVPGQVDIQAWNYKVWCASGKCGAAGPRHGYGKGNPRAAVPHGGALLY
RGCIPPRAIWSAASPALFILLLSLNLFLRFLEQSESLAEIKITRWARVQIGGRPLLGRRA
SRRPEERAAPAPWCPFVTLRHVTRRAPGSMGEIAGADGGLGLEKSRMRGANLKAARLQQN
QSQFSGCGATYGCGLVNGLLWPD

>gi568815595r:128473283_128673729|GENSCAN_predicted_CDS_6|612_bp
atggcaaaatggaggtgctcgggacatccaagtgggagtgtccctgggcaggtggatatt
caggcctggaattataaggtctggtgtgcaagtggtaaatgtggggctgccgggcctaga
catggttatggaaaagggaacccccgggcggctgtgcctcacggaggggccctgctttac
cgcggctgcataccacctcgggccatttggtcagctgcttcaccagctctcttcatcctc
ttactctccctgaatctttttcttcgttttttggagcagtcagaaagcttggccgaaatc
aagataactcgctgggcccgcgtgcagattggtgggcgccctctgctgggccggcgggcc
tctcgcaggcctgaggagcgagctgcgcctgcgccctggtgtcccttcgtaacactgcgg
cacgtcacgaggcgggcaccggggagtatgggcgaaatcgcaggcgcagacggcgggctc
gggctagaaaagtcgcgcatgcgtggggctaatttaaaggcggcgcggctccaacagaac
caaagccaattctccggctgtggcgccacctacgggtgtgggctcgtaaacggcctcctc
tggccggactag

>gi568815595r:128473283_128673729|GENSCAN_predicted_peptide_7|599_aa
MEAPAAGLFLLLLLGTWAPAPGSASSEAPPLINEDVKRTVDLSSHLAKVTAEVVLAHLGG
GSTSRATSFLLALEPELEARLAHLGVQVKGEDEEENNLEVRETKIKGKSGRFFTVKLPVA
LDPGAKISVIVETVYTHVLHPYPTQITQSEKQFVVFEGNHYFYSPYPTKTQTMRVKLASR
NVESYTKLGNPTRSEDLLDYGPFRDVPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWG
NIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKDVYYRDEIGNVSTSHLLIL
DDSVEMEIRPRFPLFGGWKTHYIVGYNLPSYEYLYNLGDQYALKMRFVDHVFDEQVIDSL
TVKIILPEGAKNIEIDSPYEISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHY
TFNKVLMLQEPLLVVAAFYILFFTVIIYVRLDFSITKDPAAEARMKVACITEQVLTLVNK
RIGLYRHFDETVNRYKQSRDISTLNSGKKSLETEHKALTSEIALLQSRLKTEGSDLCDRV
SEMQKLDAQVKELVLKSAVEAERLVAGKLKKDTYIENEKLISGKRQELVTKIDHILDAL

>gi568815595r:128473283_128673729|GENSCAN_predicted_CDS_7|1800_bp
atggaggcgccagccgccggcttgtttctgctcctgttgcttgggacttgggccccggcg
ccgggcagcgcctcctccgaggcaccgccgctgatcaatgaggacgtgaagcgcacagtg
gacctaagcagccacctggctaaggtgacggccgaggtggtcctggcgcacctgggcggc
ggctccacgtcccgagctacctctttcctgctggctttggagcctgagctcgaggcccgg
ctggcgcacctgggcgtgcaggtaaagggagaagatgaggaagagaacaatttggaagta
cgtgaaaccaaaattaagggtaaaagtgggagattcttcacagtcaagctcccagttgct
cttgatcctggggccaagatttcagtcattgtggaaacagtctacacccatgtgcttcat
ccgtatccaacccagatcacccagtcagagaaacagtttgtggtgtttgaggggaaccat
tatttctactctccctatccaacgaagacacaaaccatgcgtgtgaagcttgcctctcga
aatgtggagagctacaccaagctggggaaccccacgcgctctgaggacctactggattat
gggcctttcagagatgtgcctgcctatagtcaggatacttttaaagtacattatgagaac
aacagccctttcctgaccatcaccagcatgacccgagtcattgaagtctctcactggggt
aatattgctgtggaagaaaatgtggacttaaagcacacaggagctgtgcttaaggggcct
ttctcacgctatgattaccagagacagccagatagtggaatatcctccatccgttctttt
aaggatgtttattaccgggatgagattggcaatgtttctaccagccacctccttattttg
gatgactctgtagagatggaaatccggcctcgcttccctctctttggcgggtggaagacc
cattacatcgttggctacaacctcccaagctatgagtacctctataatttgggtgaccag
tatgcactgaagatgaggtttgtggaccatgtgtttgatgaacaagtgatagattctctg
actgtgaagatcatcctgcctgaaggagccaagaacattgaaattgatagtccctatgaa
atcagccgtgccccagatgagctgcactacacctatctggacacatttggccgccctgtg
attgttgcctacaagaaaaatctggtagaacagcacattcaggacattgtggtccactac
acgttcaacaaggtgctcatgctgcaggagcccctgctggtggtggcggccttctacatc
ctgttcttcaccgttatcatctatgttcggctggacttctccatcaccaaggatccagcc
gcagaagccaggatgaaggtagcctgcatcacagagcaggtcttgaccctggtcaacaag
agaataggcctttaccgtcactttgacgagaccgtcaataggtacaagcaatcccgggac
atctccaccctcaacagtggcaagaagagcctggagactgaacacaaggccttgaccagt
gagattgcactgctgcagtccaggctgaagacagagggctctgatctgtgcgacagagtg
agcgaaatgcagaagctggatgcacaggtcaaggagctggtgctgaagtcggcggtggag
gctgagcgcctggtggctggcaagctcaagaaagacacgtacattgagaatgagaagctc
atctcaggaaagcgccaggagctggtcaccaagatcgaccacatcctggatgccctgtag