GENSCAN 1.0	Date run:  4-Nov-116	Time: 06:01:40

Sequence gi568815597r:19820310_20023559 : 203250 bp : 43.48% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  20224  20263   40                              -2.66
 1.01 Init +  24849  24909   61  2  1   93   76    11 0.417   1.81
 1.02 Intr +  40183  40257   75  2  0   83   89    44 0.204   3.49
 1.03 Term +  52096  52232  137  2  2   77   42   153 0.445   7.78
 1.04 PlyA +  54540  54545    6                               1.05

 2.00 Prom +  56273  56312   40                              -5.86
 2.01 Init +  62205  62425  221  2  2   65   76   454 0.754  40.00
 2.02 Intr +  70076  70224  149  2  2   68   78    96 0.691   6.48
 2.03 Intr +  74059  74171  113  2  2   71   96    66 0.993   5.80
 2.04 Intr +  77231  77353  123  1  0  108   76   185 0.983  20.08
 2.05 Intr +  83964  84089  126  2  0   73   13   122 0.596   4.08
 2.06 Intr +  84582  84678   97  2  1   70   92    81 0.987   6.28
 2.07 Intr +  86123  86307  185  0  2   36   95    83 0.904   3.31
 2.08 Term +  87261  87437  177  2  0  108   41   230 0.950  17.99
 2.09 PlyA +  90103  90108    6                               1.05

 3.05 PlyA -  90343  90338    6                               1.05
 3.04 Term - 100140  99998  143  1  2   72   54   240 0.986  17.09
 3.03 Intr - 102095 101989  107  1  2   68   78   136 0.850  10.46
 3.02 Intr - 102446 102308  139  0  1  142   81   288 0.999  33.02
 3.01 Init - 103250 103211   40  2  1   41  106    50 0.886   0.67
 3.00 Prom - 104170 104131   40                              -6.66

 4.00 Prom + 104267 104306   40                              -5.46
 4.01 Init + 105043 105101   59  0  2   39  105     2 0.772  -2.22
 4.02 Term + 106093 106294  202  1  1   59   50   383 0.831  28.46
 4.03 PlyA + 107765 107770    6                               1.05

 5.13 PlyA - 108673 108668    6                               1.05
 5.12 Term - 110584 110475  110  2  2   31   47    98 0.646  -1.33
 5.11 Intr - 112795 112705   91  1  1   48  101   171 0.716  13.97
 5.10 Intr - 115106 115038   69  2  0   63   80    52 0.321   1.28
 5.09 Intr - 132160 132070   91  0  1   74   89    53 0.293   4.00
 5.08 Intr - 133969 133797  173  1  2   50   21   111 0.062  -0.66
 5.07 Intr - 154117 153999  119  2  2   87   75    13 0.249   0.08
 5.06 Intr - 154672 154631   42  2  0   92   81    23 0.334   0.21
 5.05 Intr - 157812 157706  107  2  2   39   83    87 0.739   3.16
 5.04 Intr - 158215 158071  145  2  1   87   85   151 0.982  14.04
 5.03 Intr - 161604 161573   32  2  2  118   41    12 0.091  -2.73
 5.02 Intr - 163580 163387  194  2  2  -12   81   150 0.219   2.59
 5.01 Init - 164301 164140  162  0  0   88   80   149 0.628  11.88
 5.00 Prom - 164819 164780   40                              -3.06

 6.02 PlyA - 164908 164903    6                               1.05
 6.01 Sngl - 172784 172269  516  2  0   21   43   209 0.496   5.74
 6.00 Prom - 172919 172880   40                              -4.96

 7.00 Prom + 178292 178331   40                              -2.26
 7.01 Init + 186297 186497  201  2  0   60   86    95 0.089   5.38
 7.02 Term + 192344 192526  183  1  0   39   38   123 0.215  -0.06
 7.03 PlyA + 198318 198323    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 177765 178022  258  2  0   72   53   165 0.889   6.53


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:19820310_20023559|GENSCAN_predicted_peptide_1|90_aa
MTERGGKKDTMFSKCDTEFKEKRREQQWEELAPFMAIWVVEQVSPGWGPGTGADDAVVNN
EFTQDDDDCKYCGPLGSLAQTPNKDIAMEL

>gi568815597r:19820310_20023559|GENSCAN_predicted_CDS_1|273_bp
atgactgaaaggggaggaaagaaagacacaatgttttccaaatgtgatacagaattcaag
gaaaagagaagagagcaacagtgggaagaacttgctccattcatggccatctgggtggtg
gagcaggtgtctccagggtggggtcctggcacaggtgctgatgatgcagttgtaaataat
gagtttacacaggatgacgatgactgcaaatactgtgggccattaggatctctggcacag
acaccaaacaaagacattgctatggagctgtaa

>gi568815597r:19820310_20023559|GENSCAN_predicted_peptide_2|396_aa
MSRKQAAKSRPGSGSRKAEAERKRDERAARRALAKERRNRPESGGGGGCEEEFVSFANQL
QALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPF
EKHVASLAKPGTFAGNDAIVAFARNHQLNVVIHQLNAPLWQIRGTEKSSVRELHIAYRYG
EHYDSVRRINDNSEAPAHLQTDMLHQDESNKREKIKTKGMDSEDDLRDEVEDAVQKVCNA
TGCSDFNLIVQNLEAENYNIESAIIAVLRMNQGKRNNAEENLEPSGRVLKQCGPLWEEGG
SGARIFGNQGLNEGRTENNKAQASPSEENKANKNQLAKVTNKQRREQQWMEKKKRQEERH
RHKALESRGSHRDNNRSEAEANTQVTLVKTFAALNI

>gi568815597r:19820310_20023559|GENSCAN_predicted_CDS_2|1191_bp
atgtcccgaaagcaggcggcgaagagccggccgggcagcggcagccggaaagccgaggcc
gagcgcaagcgggacgagcgggcggcgcgccgggccctggccaaggagcggcggaatcgg
ccggagtctggcggcggcggcggctgcgaggaggagttcgtcagcttcgccaaccagctg
caggccctggggctgaagctgcgggaggtgccgggggacggcaattgcttgttcagagct
cttggtgatcaattggagggacactcacgaaatcatctcaagcacagacaggagacagtg
gactacatgataaagcagcgggaagattttgaaccctttgtagaagatgacattcctttt
gagaagcatgtggccagtttggcaaagcctggtacttttgctggcaatgatgcaattgta
gcctttgcaagaaatcatcagttgaatgtagtgattcatcaacttaatgcccctttgtgg
cagattcgtggtacagagaaaagcagcgtgagggagttacacatcgcatatcggtatgga
gagcactacgacagtgttcggaggatcaatgacaactcagaggcacctgcacatctccag
acggatatgcttcatcaagatgaatcaaataaaagagaaaagatcaagacaaagggaatg
gactctgaagacgacctgagagatgaagtagaggatgctgtccagaaagtttgtaatgca
actggatgttcagattttaatttaatagtccagaacctggaagctgaaaattataatatt
gaatctgcaataattgccgtgcttcggatgaaccaagggaagagaaataatgcagaagag
aatcttgagcccagtggtcgagtgctgaagcagtgtggccctttgtgggaggagggtggc
agtggtgccagaatctttggaaatcagggcttaaatgaaggcaggaccgaaaacaataag
gcacaggccagccctagtgaagaaaacaaagcaaataaaaaccagctcgcaaaggtcaca
aacaaacagaggcgagaacagcagtggatggagaagaagaagcggcaggaggagaggcac
cgccacaaagccctggagagcagaggtagccacagggacaataacagaagcgaagcagag
gcgaacacgcaggtcaccttggtgaagaccttcgccgctctcaacatctga

>gi568815597r:19820310_20023559|GENSCAN_predicted_peptide_3|142_aa
MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSALQYNDYGCYCGIGGSHWPVDQTDW
CCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRRNL
GTYNRKYAHYPNKLCTGPTPPC

>gi568815597r:19820310_20023559|GENSCAN_predicted_CDS_3|429_bp
atgaaatctccccacgtgctggtgttcctttgcctcctggtggctctggtcaccgggaac
ctggttcagtttggggtgatgatcgagaagatgacaggcaagtccgccctgcagtacaac
gactatggctgttactgcggcatcggtggctcccactggccggtggaccagactgactgg
tgctgccacgcccacgactgctgctacgggcgtctggagaagctgggctgtgagcccaaa
ctggaaaagtatcttttctctgtcagcgaacgtggcattttctgcgccggcaggaccacc
tgccagcggctgacctgcgagtgtgacaagagggctgccctctgctttcgccgcaacctg
ggcacctacaaccgcaaatatgcccattatcccaacaagctgtgcaccgggcccaccccg
ccctgctga

>gi568815597r:19820310_20023559|GENSCAN_predicted_peptide_4|86_aa
MLGSSHPVSEKTCGEKGSESLEATTIIIIIITISIIIVNITIITITIIVITINITIIITI
AITITIFITINIIYMVFICVPTQISH

>gi568815597r:19820310_20023559|GENSCAN_predicted_CDS_4|261_bp
atgctgggctcttctcaccctgtttcagagaagacttgcggggagaaggggtcagagagc
ttagaagccaccaccatcatcatcatcataatcactatcagtatcatcatcgtcaatatt
accatcatcaccatcaccatcattgtcatcaccatcaatattaccatcatcatcaccatt
gccatcaccatcaccatcttcatcaccatcaatatcatttatatggtttttatctgtgtc
cctacccaaatctcacattga

>gi568815597r:19820310_20023559|GENSCAN_predicted_peptide_5|444_aa
MPEPPLSAAVGSCAARASPTSAIPCSMAPSPIDHPRAEECGTQRSTCRQLHLRQVGSFTP
EPVRPRTHQKEETPNTSEHQKEQTPDTPPLRTVTLTVRDRGFILEVSETKNPPIPVTVCV
TTYHMMSFTSLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCC
VTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCGNSSSYWPAGRKQEGFRWEIPTWTSYS
PTCFSNNTHLGCWVWIPSQRHPAQGTQMVKEVDLRLSFHLLGCSTRLNPSSLAILVISVI
GFLFGEQQDLHQTPGVSVTEFLTVWQWFSNLSKHRNYTEPCKKYFQGPIPGVSNSAPCIW
TGIVTCFDQMDVAKVLLQDNDDDGGGDDDDDGGGVSGNDCDGDDSDSNVRQGPNEPYPDF
IACLKDAAQKAILDAHVRETIVQL

>gi568815597r:19820310_20023559|GENSCAN_predicted_CDS_5|1335_bp
atgcctgagcctcccctctccgccgccgtgggctcctgcgcggcccgagcctcccccacg
agcgccatcccctgctccatggcgcccagtcccattgaccacccaagggctgaggagtgt
ggcacacagcgcagcacttgcaggcagctccacctgcggcaggtcggcagcttcactcct
gagccagtgagaccacgaacccaccagaaggaagaaactccaaacacatctgaacatcag
aaggaacaaactccggacacgccgcctttaagaactgtaacactcactgtgagggaccgc
ggcttcattcttgaagtcagtgagaccaagaacccaccaattccggtcacagtatgtgtc
accacctatcacatgatgtcatttactagcctactgcaggcccatgggaatttggtgaat
ttccacagaatgatcaagttgacgacaggaaaggaagccgcactcagttatggcttctac
ggctgccactgtggcgtgggtggcagaggatcccccaaggatgcaacggatcgctgctgt
gtcactcatgactgttgctacaaacgtctggagaaacgtggatgtggcaccaaatttctg
agctacaagtttagcaactcggggagcagaatcacctgtggcaatagcagctcctactgg
cctgctgggagaaagcaggaagggttccgctgggaaattcccacctggaccagctacagc
cccacctgtttctccaataacacgcatctgggctgctgggtgtggatcccttcacaaagg
caccctgcacaggggacacagatggtcaaggaggtggatttgagactgagttttcatctc
cttggctgcagcacccgattaaatccttcttccttggcaatacttgtcatctcagtgatt
ggctttctgtttggcgagcagcaggacctacatcaaacccctggtgtttcagtaacagaa
tttctaacagtgtggcagtggttctccaacttgagcaagcatcggaattacacggagcct
tgtaaaaaatatttccagggcccaatccctggagtttctaattcagctccttgcatctgg
actggcattgtaacttgctttgatcaaatggatgtggcaaaagtgctgctgcaggataat
gatgatgatggtggtggtgatgatgatgatgatggtggtggtgttagtggtaatgattgt
gatggtgatgacagtgatagtaatgtcagacagggccctaatgaaccttacccagacttc
attgcctgcctaaaagatgcagctcaaaaggctatcttggacgcacatgtccgagagaca
attgtccaactatag

>gi568815597r:19820310_20023559|GENSCAN_predicted_peptide_6|171_aa
MRQKIKKDIQDLNAALDQEDLIDIYRTLHHKSRDYTFFSVPHSTYSKIDHIIGNKTLLSR
CKRIEIITVSLSDHSAIKLELRIKKLSQNCTTTWKLNNLLLNDYWVTNKIKAEITKFFET
SEKKETTYQNLWDTFKAVCKGKFVTLNAHIRKQETSKIGTLILQLKELEKQ

>gi568815597r:19820310_20023559|GENSCAN_predicted_CDS_6|516_bp
atgagacagaaaattaaaaaggacattcaggacttgaacgcagctctggaccaagaggac
ctaatagatatctacagaaccctccaccacaaatcaagagactatacgttcttctcagta
ccacatagcacttattctaaaatcgaccacataattggaaataaaacactcctcagcaga
tgcaaaagaatagaaatcataacagtcagcctctcagaccatagtgcaataaaattagaa
ctaaggattaagaaactcagtcaaaactgcacaactacatggaaactgaacaaccttctc
ctgaatgactactgggtaaccaacaaaattaaagcagaaataacgaagttctttgaaacc
agtgagaaaaaagagacaacataccagaatctctgggacacatttaaagcagtgtgtaaa
ggcaaatttgtaacactaaatgcccacatcagaaagcaggaaacatctaaaattggcacc
cttatattacaattaaaagaactagagaagcaatag

>gi568815597r:19820310_20023559|GENSCAN_predicted_peptide_7|127_aa
MSELLFTIATKRIKYPGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGIMNIM
KMAIMPKFCGLWGDPTVMVPPDILMESLCGSLDAMAPLGIALVEAVCSGPTPVAVLFLGP
KALWDIL

>gi568815597r:19820310_20023559|GENSCAN_predicted_CDS_7|384_bp
atgagtgaactcctattcacaattgctacaaagagaataaaatacccaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaacgaaataaaa
gaggacacaaataaatggaagaacattccatgctcatggataggaataatgaatatcatg
aaaatggccataatgcccaagttttgtggtctttggggtgaccccactgtcatggttcca
ccagacatccttatggagtctctctgtggcagtcttgatgccatggccccactgggcatt
gccttagtggaggctgtctgcagcggccccacccctgtggcagttctcttcctgggccct
aaggctctctgggacatactttga