Result of FASTA (omim) for pF1KB7199
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7199, 467 aa
  1>>>pF1KB7199 467 - 467 aa - 467 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.6699+/-0.000426; mu= 3.5429+/- 0.026
 mean_var=346.8726+/-77.541, 0's: 0 Z-trim(120.7): 1585  B-trim: 1961 in 1/54
 Lambda= 0.068864
 statistics sampled from 34193 (36201) to 34193 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.424), width:  16
 Scan time:  8.600

The best scores are:                                      opt bits E(85289)
NP_003404 (OMIM: 300265,306955,314390) zinc finger ( 467) 3303 342.3 1.7e-93
NP_001317590 (OMIM: 300265,306955,314390) zinc fin ( 457) 2912 303.4 8.2e-82
NP_003403 (OMIM: 600470,616602) zinc finger protei ( 447) 1790 192.0 2.9e-48
NP_009060 (OMIM: 603073,609637) zinc finger protei ( 532) 1720 185.1   4e-46
XP_011519412 (OMIM: 603073,609637) PREDICTED: zinc ( 427) 1577 170.8 6.6e-42
NP_115529 (OMIM: 608948) zinc finger protein ZIC 4 ( 334) 1346 147.7 4.6e-35
NP_001161851 (OMIM: 608948) zinc finger protein ZI ( 372) 1346 147.7 4.9e-35
NP_001161850 (OMIM: 608948) zinc finger protein ZI ( 384) 1346 147.8   5e-35
XP_016862803 (OMIM: 608948) PREDICTED: zinc finger ( 291)  922 105.5   2e-22
XP_011509275 (OMIM: 165230,610829,615849) PREDICTE (1461)  603 74.7 1.9e-12
XP_011509273 (OMIM: 165230,610829,615849) PREDICTE (1521)  603 74.8 1.9e-12
XP_011509272 (OMIM: 165230,610829,615849) PREDICTE (1539)  603 74.8 1.9e-12
XP_011509274 (OMIM: 165230,610829,615849) PREDICTE (1553)  603 74.8 1.9e-12
NP_005261 (OMIM: 165230,610829,615849) zinc finger (1586)  603 74.8   2e-12
XP_011509271 (OMIM: 165230,610829,615849) PREDICTE (1670)  603 74.8   2e-12
XP_011513576 (OMIM: 146510,165240,174200,174700,17 (1521)  600 74.5 2.3e-12
XP_016867486 (OMIM: 146510,165240,174200,174700,17 (1579)  600 74.5 2.4e-12
NP_000159 (OMIM: 146510,165240,174200,174700,17570 (1580)  600 74.5 2.4e-12
XP_011509276 (OMIM: 165230,610829,615849) PREDICTE (1444)  596 74.0   3e-12
XP_006712485 (OMIM: 165230,610829,615849) PREDICTE (1569)  596 74.1 3.1e-12
XP_016859307 (OMIM: 165230,610829,615849) PREDICTE (1653)  596 74.1 3.2e-12
XP_005251445 (OMIM: 610192,610199) PREDICTED: zinc ( 708)  583 72.3 4.8e-12
XP_005251444 (OMIM: 610192,610199) PREDICTED: zinc ( 708)  583 72.3 4.8e-12
XP_011516069 (OMIM: 610192,610199) PREDICTED: zinc ( 708)  583 72.3 4.8e-12
XP_016869850 (OMIM: 610192,610199) PREDICTED: zinc ( 775)  583 72.4   5e-12
XP_011516068 (OMIM: 610192,610199) PREDICTED: zinc ( 775)  583 72.4   5e-12
NP_689842 (OMIM: 610192,610199) zinc finger protei ( 775)  583 72.4   5e-12
XP_005251443 (OMIM: 610192,610199) PREDICTED: zinc ( 775)  583 72.4   5e-12
XP_011516067 (OMIM: 610192,610199) PREDICTED: zinc ( 868)  583 72.4 5.4e-12
NP_001035878 (OMIM: 610192,610199) zinc finger pro ( 930)  583 72.5 5.6e-12
XP_011516066 (OMIM: 610192,610199) PREDICTED: zinc ( 930)  583 72.5 5.6e-12
XP_011516065 (OMIM: 610192,610199) PREDICTED: zinc ( 930)  583 72.5 5.6e-12
NP_001161081 (OMIM: 165220) zinc finger protein GL (1065)  577 72.0 9.2e-12
NP_001153517 (OMIM: 165220) zinc finger protein GL ( 978)  576 71.8 9.4e-12
NP_005260 (OMIM: 165220) zinc finger protein GLI1  (1106)  577 72.0 9.4e-12
XP_011536491 (OMIM: 165220) PREDICTED: zinc finger (1106)  577 72.0 9.4e-12
NP_671726 (OMIM: 610378) zinc finger protein GLIS1 ( 620)  554 69.4 3.3e-11
XP_016855900 (OMIM: 610378) PREDICTED: zinc finger ( 629)  554 69.4 3.3e-11
XP_016855898 (OMIM: 610378) PREDICTED: zinc finger ( 791)  554 69.5 3.8e-11
XP_016855899 (OMIM: 610378) PREDICTED: zinc finger ( 795)  554 69.5 3.8e-11
XP_016855897 (OMIM: 610378) PREDICTED: zinc finger ( 795)  554 69.5 3.8e-11
XP_005253184 (OMIM: 603433) PREDICTED: zinc finger ( 435)  466 60.4 1.1e-08
XP_016873745 (OMIM: 603433) PREDICTED: zinc finger ( 606)  466 60.6 1.4e-08
NP_001269586 (OMIM: 603433) zinc finger protein 14 ( 607)  466 60.6 1.4e-08
XP_016873742 (OMIM: 603433) PREDICTED: zinc finger ( 621)  466 60.6 1.4e-08
XP_016873741 (OMIM: 603433) PREDICTED: zinc finger ( 622)  466 60.6 1.4e-08
XP_016873743 (OMIM: 603433) PREDICTED: zinc finger ( 637)  466 60.6 1.4e-08
XP_016873744 (OMIM: 603433) PREDICTED: zinc finger ( 637)  466 60.6 1.4e-08
NP_001269585 (OMIM: 603433) zinc finger protein 14 ( 637)  466 60.6 1.4e-08
NP_003433 (OMIM: 603433) zinc finger protein 143 i ( 638)  466 60.6 1.4e-08


>>NP_003404 (OMIM: 300265,306955,314390) zinc finger pro  (467 aa)
 initn: 3303 init1: 3303 opt: 3303  Z-score: 1799.6  bits: 342.3 E(85289): 1.7e-93
Smith-Waterman score: 3303; 100.0% identity (100.0% similar) in 467 aa overlap (1-467:1-467)

               10        20        30        40        50        60
pF1KB7 MTMLLDGGPQFPGLGVGSFGAPRHHEMPNREPAGMGLNPFGDSTHAAAAAAAAAAFKLSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MTMLLDGGPQFPGLGVGSFGAPRHHEMPNREPAGMGLNPFGDSTHAAAAAAAAAAFKLSP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 AAAHDLSSGQSSAFTPQGSGYANALGHHHHHHHHHHHTSQVPSYGGAASAAFNSTREFLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 AAAHDLSSGQSSAFTPQGSGYANALGHHHHHHHHHHHTSQVPSYGGAASAAFNSTREFLF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 RQRSSGLSEAASGGGQHGLFAGSASSLHAPAGIPEPPSYLLFPGLHEQGAGHPSPTGHVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RQRSSGLSEAASGGGQHGLFAGSASSLHAPAGIPEPPSYLLFPGLHEQGAGHPSPTGHVD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 NNQVHLGLRGELFGRADPYRPVASPRTDPYAAGAQFPNYSPMNMNMGVNVAAHHGPGAFF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NNQVHLGLRGELFGRADPYRPVASPRTDPYAAGAQFPNYSPMNMNMGVNVAAHHGPGAFF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 RYMRQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RYMRQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 EFEGCDRRFANSSDRKKHMHVHTSDKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EFEGCDRRFANSSDRKKHMHVHTSDKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPA
              370       380       390       400       410       420

              430       440       450       460       
pF1KB7 ASSGYESSTPPAIASANSKDTTKTPSAVQTSTSHNPGLPPNFNEWYV
       :::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ASSGYESSTPPAIASANSKDTTKTPSAVQTSTSHNPGLPPNFNEWYV
              430       440       450       460       

>>NP_001317590 (OMIM: 300265,306955,314390) zinc finger   (457 aa)
 initn: 2912 init1: 2912 opt: 2912  Z-score: 1589.8  bits: 303.4 E(85289): 8.2e-82
Smith-Waterman score: 2912; 100.0% identity (100.0% similar) in 408 aa overlap (1-408:1-408)

               10        20        30        40        50        60
pF1KB7 MTMLLDGGPQFPGLGVGSFGAPRHHEMPNREPAGMGLNPFGDSTHAAAAAAAAAAFKLSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTMLLDGGPQFPGLGVGSFGAPRHHEMPNREPAGMGLNPFGDSTHAAAAAAAAAAFKLSP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 AAAHDLSSGQSSAFTPQGSGYANALGHHHHHHHHHHHTSQVPSYGGAASAAFNSTREFLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAAHDLSSGQSSAFTPQGSGYANALGHHHHHHHHHHHTSQVPSYGGAASAAFNSTREFLF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 RQRSSGLSEAASGGGQHGLFAGSASSLHAPAGIPEPPSYLLFPGLHEQGAGHPSPTGHVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQRSSGLSEAASGGGQHGLFAGSASSLHAPAGIPEPPSYLLFPGLHEQGAGHPSPTGHVD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 NNQVHLGLRGELFGRADPYRPVASPRTDPYAAGAQFPNYSPMNMNMGVNVAAHHGPGAFF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNQVHLGLRGELFGRADPYRPVASPRTDPYAAGAQFPNYSPMNMNMGVNVAAHHGPGAFF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 RYMRQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYMRQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 EFEGCDRRFANSSDRKKHMHVHTSDKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPA
       ::::::::::::::::::::::::::::::::::::::::::::::::            
NP_001 EFEGCDRRFANSSDRKKHMHVHTSDKPYICKVCDKSYTHPSSLRKHMKCCPAWYPGQSLI
              370       380       390       400       410       420

              430       440       450       460       
pF1KB7 ASSGYESSTPPAIASANSKDTTKTPSAVQTSTSHNPGLPPNFNEWYV
                                                      
NP_001 PDEELDTDVGMQQPALHNTTYPKCRVNAEPTVQEMIY          
              430       440       450                 

>>NP_003403 (OMIM: 600470,616602) zinc finger protein ZI  (447 aa)
 initn: 1851 init1: 1275 opt: 1790  Z-score: 987.5  bits: 192.0 E(85289): 2.9e-48
Smith-Waterman score: 2017; 64.5% identity (81.9% similar) in 476 aa overlap (3-467:1-447)

               10        20           30        40        50       
pF1KB7 MTMLLDGGPQFPGLGVGSFGAPRHH---EMPNREPAGMGLNPFGDSTHAAAAAAAAAAFK
         ::::.:::.:..:: .::: :::   .. .:. .:.:.:::.:.          .:::
NP_003   MLLDAGPQYPAIGVTTFGASRHHSAGDVAERD-VGLGINPFADGM---------GAFK
                 10        20        30         40                 

        60        70        80          90       100       110     
pF1KB7 LSPAAAHDLSSGQSSAFTPQGSGYANA--LGHHHHHHHHHHHTSQVPSYGGAASAAFNST
       :.:.. :.:.:. ..::: :. ::: :  ::::::  :       : ::   .:::::::
NP_003 LNPSS-HELASAGQTAFTSQAPGYAAAAALGHHHHPGH-------VGSY---SSAAFNST
       50         60        70        80                  90       

         120       130       140       150       160       170     
pF1KB7 REFLFRQRSSGLSEAASGGGQHGLFAGSASSLHAPAGIPEPPSYLLFPGLHEQGAGHPSP
       :.::::.:. : . ::....::.:::.::... .: :  .  ..:::::::::.::: ::
NP_003 RDFLFRNRGFG-DAAAAASAQHSLFAASAGGFGGPHGHTDAAGHLLFPGLHEQAAGHASP
       100        110       120       130       140       150      

         180       190       200       210       220       230     
pF1KB7 TGHVDNNQVHLGLRGELFGRADPYRPVASPRTDPYAAGAQFPNYSPMNMNMGVNVAAHHG
         .: :.:..::. :... : . :  :.:::.. :::  :. .:.:::.::    :::::
NP_003 --NVVNGQMRLGFSGDMYPRPEQYGQVTSPRSEHYAA-PQLHGYGPMNVNM----AAHHG
          160       170       180       190        200             

         240       250       260       270       280       290     
pF1KB7 PGAFFRYMRQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNH
        ::::::::::::::: ::::.  ::. :::::..:::::::::::::.::::::::.::
NP_003 AGAFFRYMRQPIKQELICKWIEPEQLANPKKSCNKTFSTMHELVTHVTVEHVGGPEQSNH
     210       220       230       240       250       260         

         300       310       320       330       340       350     
pF1KB7 VCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGE
       .:.::::::::: :::::::::::::::::::::::::::::.:::::::::::::::::
NP_003 ICFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGE
     270       280       290       300       310       320         

         360       370       380       390       400       410     
pF1KB7 KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYICKVCDKSYTHPSSLRKHMKVHES--Q
       :::::::::::::::::::::::::::::::::.::.::::::::::::::::::::  :
NP_003 KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSLRKHMKVHESSSQ
     330       340       350       360       370       380         

           420       430       440        450          460       
pF1KB7 GSDSSPAASSGYESSTPPAIASANSKD-TTKTPSAVQTSTSHNPG---LPPNFNEWYV
       ::. ::::::::::::::.:.: .. . ::.. :  .... :. :   :  :::::::
NP_003 GSQPSPAASSGYESSTPPTIVSPSTDNPTTSSLSPSSSAVHHTAGHSALSSNFNEWYV
     390       400       410       420       430       440       

>>NP_009060 (OMIM: 603073,609637) zinc finger protein ZI  (532 aa)
 initn: 1929 init1: 1152 opt: 1720  Z-score: 949.1  bits: 185.1 E(85289): 4e-46
Smith-Waterman score: 1926; 63.9% identity (79.1% similar) in 479 aa overlap (3-453:1-463)

               10        20                  30         40         
pF1KB7 MTMLLDGGPQFPGLGVGSFGAPRHH----------EMPNREPA-GMGLNPFGDSTHAAAA
         ::::.:::::..:::::.  .::          :: .:: . . . : : ::     :
NP_009   MLLDAGPQFPAIGVGSFARHHHHSAAAAAAAAAEMQDRELSLAAAQNGFVDS-----A
                 10        20        30        40        50        

      50        60        70        80         90       100        
pF1KB7 AAAAAAFKLSPAAAHDLSSGQSSAFTPQGSG-YANALGHHHHHHHHHHHTSQVPSYGGAA
       ::  .::::.:.: :.:: ::::::: :: : : .. .          :...: ::.:  
NP_009 AAHMGAFKLNPGA-HELSPGQSSAFTSQGPGAYPGSAAAAAAAAALGPHAAHVGSYSGP-
            60         70        80        90       100       110  

      110       120       130       140       150       160        
pF1KB7 SAAFNSTREFLFRQRSSGLSEAASGGGQHGLFAGSASSLHAPAGIPEPPSYLLFPGLHEQ
          :::::.::::.:  :....: ::::::::. .:..::   .  .  ..:::::: ::
NP_009 --PFNSTRDFLFRSR--GFGDSAPGGGQHGLFGPGAGGLHHAHS--DAQGHLLFPGLPEQ
               120         130       140       150         160     

      170       180       190       200       210        220       
pF1KB7 GAGHPSPTGHVDNNQVHLGLRGELFGRADPYRPVASPRTDPYAAGAQFPN-YSPMNMNMG
        . : :   .: :.:..::: ::.:::.. :: :::::::::.: ::. : :.:::::::
NP_009 HGPHGSQ--NVLNGQMRLGLPGEVFGRSEQYRQVASPRTDPYSA-AQLHNQYGPMNMNMG
         170         180       190       200        210       220  

       230                240        250       260       270       
pF1KB7 VNVAA---------HHGPGAFFRYMRQP-IKQELSCKWIDEAQLSRPKKSCDRTFSTMHE
       .:.::         :: ::::::::::  ::::: :::::  ::: :::::..:::::::
NP_009 MNMAAAAAHHHHHHHHHPGAFFRYMRQQCIKQELICKWIDPEQLSNPKKSCNKTFSTMHE
            230       240       250       260       270       280  

       280       290       300       310       320       330       
pF1KB7 LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK
       :::::..::::::::.::::.::::::::: :::::::::::::::::::::::::::::
NP_009 LVTHVSVEHVGGPEQSNHVCFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGK
            290       300       310       320       330       340  

       340       350       360       370       380       390       
pF1KB7 IFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYICKVCDKSY
       .::::::::::::::::::::.:::::::::::::::::::::::::::::.::.:::::
NP_009 VFARSENLKIHKRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSY
            350       360       370       380       390       400  

       400       410         420       430       440          450  
pF1KB7 THPSSLRKHMKVHES--QGSDSSPAASSGYESSTPPAIASANSKDTTKT---PSAVQTST
       :::::::::::::::  :::.:::::::::::::::...: ...  ...   :.:. ...
NP_009 THPSSLRKHMKVHESSPQGSESSPAASSGYESSTPPGLVSPSAEPQSSSNLSPAAAAAAA
            410       420       430       440       450       460  

            460                                                    
pF1KB7 SHNPGLPPNFNEWYV                                             
       .                                                           
NP_009 AAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHSG
            470       480       490       500       510       520  

>>XP_011519412 (OMIM: 603073,609637) PREDICTED: zinc fin  (427 aa)
 initn: 1528 init1: 1124 opt: 1577  Z-score: 873.3  bits: 170.8 E(85289): 6.6e-42
Smith-Waterman score: 1783; 65.5% identity (78.8% similar) in 429 aa overlap (3-408:1-413)

               10        20                  30         40         
pF1KB7 MTMLLDGGPQFPGLGVGSFGAPRHH----------EMPNREPA-GMGLNPFGDSTHAAAA
         ::::.:::::..:::::.  .::          :: .:: . . . : : ::     :
XP_011   MLLDAGPQFPAIGVGSFARHHHHSAAAAAAAAAEMQDRELSLAAAQNGFVDS-----A
                 10        20        30        40        50        

      50        60        70        80         90       100        
pF1KB7 AAAAAAFKLSPAAAHDLSSGQSSAFTPQGSG-YANALGHHHHHHHHHHHTSQVPSYGGAA
       ::  .::::.:.: :.:: ::::::: :: : : .. .          :...: ::.:  
XP_011 AAHMGAFKLNPGA-HELSPGQSSAFTSQGPGAYPGSAAAAAAAAALGPHAAHVGSYSG--
            60         70        80        90       100       110  

      110       120       130       140       150       160        
pF1KB7 SAAFNSTREFLFRQRSSGLSEAASGGGQHGLFAGSASSLHAPAGIPEPPSYLLFPGLHEQ
          :::::.::::.:  :....: ::::::::. .:..::   .  .  ..:::::: ::
XP_011 -PPFNSTRDFLFRSR--GFGDSAPGGGQHGLFGPGAGGLHHAHS--DAQGHLLFPGLPEQ
               120         130       140       150         160     

      170       180       190       200       210        220       
pF1KB7 GAGHPSPTGHVDNNQVHLGLRGELFGRADPYRPVASPRTDPYAAGAQFPN-YSPMNMNMG
        . : :   .: :.:..::: ::.:::.. :: :::::::::.: ::. : :.:::::::
XP_011 HGPHGSQ--NVLNGQMRLGLPGEVFGRSEQYRQVASPRTDPYSA-AQLHNQYGPMNMNMG
         170         180       190       200        210       220  

       230                240        250       260       270       
pF1KB7 VNVAA---------HHGPGAFFRYMRQP-IKQELSCKWIDEAQLSRPKKSCDRTFSTMHE
       .:.::         :: ::::::::::  ::::: :::::  ::: :::::..:::::::
XP_011 MNMAAAAAHHHHHHHHHPGAFFRYMRQQCIKQELICKWIDPEQLSNPKKSCNKTFSTMHE
            230       240       250       260       270       280  

       280       290       300       310       320       330       
pF1KB7 LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK
       :::::..::::::::.::::.::::::::: :::::::::::::::::::::::::::::
XP_011 LVTHVSVEHVGGPEQSNHVCFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGK
            290       300       310       320       330       340  

       340       350       360       370       380       390       
pF1KB7 IFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYICKVCDKSY
       .::::::::::::::::::::.:::::::::::::::::::::::::::::.::.:::::
XP_011 VFARSENLKIHKRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSY
            350       360       370       380       390       400  

       400       410       420       430       440       450       
pF1KB7 THPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAIASANSKDTTKTPSAVQTSTSHNPG
       :::::::::::                                                 
XP_011 THPSSLRKHMKSPLVPPPGFCLAGP                                   
            410       420                                          

>>NP_115529 (OMIM: 608948) zinc finger protein ZIC 4 iso  (334 aa)
 initn: 1270 init1: 856 opt: 1346  Z-score: 750.4  bits: 147.7 E(85289): 4.6e-35
Smith-Waterman score: 1356; 60.9% identity (77.1% similar) in 340 aa overlap (120-453:13-330)

      90       100       110       120       130       140         
pF1KB7 HHHHHHHHTSQVPSYGGAASAAFNSTREFLFRQRSSGLSEAASGGGQHGLFAGSASSLHA
                                     .:   . :.:..:..:.::    .:::   
NP_115                   MRYKTSLVMRKRLRLYRNTLKESSSSSGHHGPQLTAASS---
                                 10        20        30            

     150       160       170       180       190       200         
pF1KB7 PAGIPEPPSYLLFPGLHEQGAGHPSPTGHVDNNQVHLGLRGELFGRADPYRPVASPRTDP
              ::  .::::::.   . ::.  . :. ..::: :....: .:. :  . :.: 
NP_115 -------PS--VFPGLHEEPP-QASPSRPL-NGLLRLGLPGDMYARPEPFPPGPAARSDA
             40          50          60        70        80        

     210       220       230       240       250       260         
pF1KB7 YAAGAQFPNYSPMNMNMGVNVAAHHGPGAFFRYMRQPIKQELSCKWIDEAQLSRPKKSCD
        ::.: . .:.  .::. ::.:: :::::::::::::::::: :::.     . :.  :.
NP_115 LAAAAALHGYG--GMNLTVNLAAPHGPGAFFRYMRQPIKQELICKWLAADGTATPSL-CS
       90         100       110       120       130       140      

     270       280       290       300       310       320         
pF1KB7 RTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFP
       .:::::::::::::.:::::::: ::.:.::::::.:: :::::::::::::::::::::
NP_115 KTFSTMHELVTHVTVEHVGGPEQANHICFWEECPRQGKPFKAKYKLVNHIRVHTGEKPFP
         150       160       170       180       190       200     

     330       340       350       360       370       380         
pF1KB7 CPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYI
       ::::::::.::::::::::::::::::::.::::::.:::::::::::: ::::::::: 
NP_115 CPFPGCGKVFARSENLKIHKRTHTGEKPFRCEFEGCERRFANSSDRKKHSHVHTSDKPYT
         210       220       230       240       250       260     

     390         400       410       420       430           440   
pF1KB7 CKV--CDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAIASANS----KDTTK
       :::  ::: ::::::::::::::       ::  ::::.:.:: :..: .:    :. . 
NP_115 CKVRGCDKCYTHPSSLRKHMKVH-----GRSPPPSSGYDSATPSALVSPSSDCGHKSQVA
         270       280            290       300       310       320

           450       460       
pF1KB7 TPSAVQTSTSHNPGLPPNFNEWYV
       . .:: . :.              
NP_115 SSAAVAARTADLSE          
              330              

>>NP_001161851 (OMIM: 608948) zinc finger protein ZIC 4   (372 aa)
 initn: 1270 init1: 856 opt: 1346  Z-score: 749.9  bits: 147.7 E(85289): 4.9e-35
Smith-Waterman score: 1357; 58.0% identity (75.0% similar) in 364 aa overlap (100-453:27-368)

      70        80        90       100       110       120         
pF1KB7 QSSAFTPQGSGYANALGHHHHHHHHHHHTSQVPSYGGAASAAFNSTREFLFRQR----SS
                                     ..:  . : :  .     ...:.:     .
NP_001     MNGPCQSLRKAEGLLEGCTSAVTVFRKLPLDSKAQSQKMRYKTSLVMRKRLRLYRN
                   10        20        30        40        50      

         130       140       150       160       170       180     
pF1KB7 GLSEAASGGGQHGLFAGSASSLHAPAGIPEPPSYLLFPGLHEQGAGHPSPTGHVDNNQVH
        :.:..:..:.::    .:::          ::  .::::::.   . ::.  . :. ..
NP_001 TLKESSSSSGHHGPQLTAASS----------PS--VFPGLHEEPP-QASPSRPL-NGLLR
         60        70                    80         90        100  

         190       200       210       220       230       240     
pF1KB7 LGLRGELFGRADPYRPVASPRTDPYAAGAQFPNYSPMNMNMGVNVAAHHGPGAFFRYMRQ
       ::: :....: .:. :  . :.:  ::.: . .:. ::..  ::.:: ::::::::::::
NP_001 LGLPGDMYARPEPFPPGPAARSDALAAAAALHGYGGMNLT--VNLAAPHGPGAFFRYMRQ
            110       120       130       140         150       160

         250       260       270       280       290       300     
pF1KB7 PIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPRE
       :::::: :::.     . :.  :..:::::::::::::.:::::::: ::.:.::::::.
NP_001 PIKQELICKWLAADGTATPSL-CSKTFSTMHELVTHVTVEHVGGPEQANHICFWEECPRQ
              170       180        190       200       210         

         310       320       330       340       350       360     
pF1KB7 GKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGC
       :: :::::::::::::::::::::::::::::.::::::::::::::::::::.::::::
NP_001 GKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFRCEFEGC
     220       230       240       250       260       270         

         370       380       390         400       410       420   
pF1KB7 DRRFANSSDRKKHMHVHTSDKPYICKV--CDKSYTHPSSLRKHMKVHESQGSDSSPAASS
       .:::::::::::: ::::::::: :::  ::: ::::::::::::::       ::  ::
NP_001 ERRFANSSDRKKHSHVHTSDKPYTCKVRGCDKCYTHPSSLRKHMKVH-----GRSPPPSS
     280       290       300       310       320            330    

           430           440       450       460       
pF1KB7 GYESSTPPAIASANS----KDTTKTPSAVQTSTSHNPGLPPNFNEWYV
       ::.:.:: :..: .:    :. . . .:: . :.              
NP_001 GYDSATPSALVSPSSDCGHKSQVASSAAVAARTADLSE          
          340       350       360       370            

>>NP_001161850 (OMIM: 608948) zinc finger protein ZIC 4   (384 aa)
 initn: 1270 init1: 856 opt: 1346  Z-score: 749.8  bits: 147.8 E(85289): 5e-35
Smith-Waterman score: 1356; 60.9% identity (77.1% similar) in 340 aa overlap (120-453:63-380)

      90       100       110       120       130       140         
pF1KB7 HHHHHHHHTSQVPSYGGAASAAFNSTREFLFRQRSSGLSEAASGGGQHGLFAGSASSLHA
                                     .:   . :.:..:..:.::    .:::   
NP_001 LERIENNNTLWEKAQSQKMRYKTSLVMRKRLRLYRNTLKESSSSSGHHGPQLTAASS---
             40        50        60        70        80            

     150       160       170       180       190       200         
pF1KB7 PAGIPEPPSYLLFPGLHEQGAGHPSPTGHVDNNQVHLGLRGELFGRADPYRPVASPRTDP
              ::  .::::::.   . ::.  . :. ..::: :....: .:. :  . :.: 
NP_001 -------PS--VFPGLHEEPP-QASPSRPL-NGLLRLGLPGDMYARPEPFPPGPAARSDA
             90         100         110       120       130        

     210       220       230       240       250       260         
pF1KB7 YAAGAQFPNYSPMNMNMGVNVAAHHGPGAFFRYMRQPIKQELSCKWIDEAQLSRPKKSCD
        ::.: . .:.  .::. ::.:: :::::::::::::::::: :::.     . :.  :.
NP_001 LAAAAALHGYG--GMNLTVNLAAPHGPGAFFRYMRQPIKQELICKWLAADGTATPSL-CS
      140         150       160       170       180       190      

     270       280       290       300       310       320         
pF1KB7 RTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFP
       .:::::::::::::.:::::::: ::.:.::::::.:: :::::::::::::::::::::
NP_001 KTFSTMHELVTHVTVEHVGGPEQANHICFWEECPRQGKPFKAKYKLVNHIRVHTGEKPFP
         200       210       220       230       240       250     

     330       340       350       360       370       380         
pF1KB7 CPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYI
       ::::::::.::::::::::::::::::::.::::::.:::::::::::: ::::::::: 
NP_001 CPFPGCGKVFARSENLKIHKRTHTGEKPFRCEFEGCERRFANSSDRKKHSHVHTSDKPYT
         260       270       280       290       300       310     

     390         400       410       420       430           440   
pF1KB7 CKV--CDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAIASANS----KDTTK
       :::  ::: ::::::::::::::       ::  ::::.:.:: :..: .:    :. . 
NP_001 CKVRGCDKCYTHPSSLRKHMKVH-----GRSPPPSSGYDSATPSALVSPSSDCGHKSQVA
         320       330            340       350       360       370

           450       460       
pF1KB7 TPSAVQTSTSHNPGLPPNFNEWYV
       . .:: . :.              
NP_001 SSAAVAARTADLSE          
              380              

>>XP_016862803 (OMIM: 608948) PREDICTED: zinc finger pro  (291 aa)
 initn: 994 init1: 580 opt: 922  Z-score: 523.4  bits: 105.5 E(85289): 2e-22
Smith-Waterman score: 932; 58.0% identity (76.5% similar) in 243 aa overlap (120-362:63-288)

      90       100       110       120       130       140         
pF1KB7 HHHHHHHHTSQVPSYGGAASAAFNSTREFLFRQRSSGLSEAASGGGQHGLFAGSASSLHA
                                     .:   . :.:..:..:.::    .:::   
XP_016 LERIENNNTLWEKAQSQKMRYKTSLVMRKRLRLYRNTLKESSSSSGHHGPQLTAASS---
             40        50        60        70        80            

     150       160       170       180       190       200         
pF1KB7 PAGIPEPPSYLLFPGLHEQGAGHPSPTGHVDNNQVHLGLRGELFGRADPYRPVASPRTDP
              ::  .::::::.   . ::.  . :. ..::: :....: .:. :  . :.: 
XP_016 -------PS--VFPGLHEE-PPQASPSRPL-NGLLRLGLPGDMYARPEPFPPGPAARSDA
             90          100        110       120       130        

     210       220       230       240       250       260         
pF1KB7 YAAGAQFPNYSPMNMNMGVNVAAHHGPGAFFRYMRQPIKQELSCKWIDEAQLSRPKKSCD
        ::.: . .:.  .::. ::.:: :::::::::::::::::: :::.     . :.  :.
XP_016 LAAAAALHGYG--GMNLTVNLAAPHGPGAFFRYMRQPIKQELICKWLAADGTATPSL-CS
      140         150       160       170       180       190      

     270       280       290       300       310       320         
pF1KB7 RTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFP
       .:::::::::::::.:::::::: ::.:.::::::.:: :::::::::::::::::::::
XP_016 KTFSTMHELVTHVTVEHVGGPEQANHICFWEECPRQGKPFKAKYKLVNHIRVHTGEKPFP
         200       210       220       230       240       250     

     330       340       350       360       370       380         
pF1KB7 CPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYI
       ::::::::.:::::::::::::::.:   . .:                           
XP_016 CPFPGCGKVFARSENLKIHKRTHTAEAANRSKFLRS                        
         260       270       280       290                         

     390       400       410       420       430       440         
pF1KB7 CKVCDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAIASANSKDTTKTPSAVQ

>>XP_011509275 (OMIM: 165230,610829,615849) PREDICTED: z  (1461 aa)
 initn: 502 init1: 394 opt: 603  Z-score: 344.6  bits: 74.7 E(85289): 1.9e-12
Smith-Waterman score: 617; 32.6% identity (60.4% similar) in 371 aa overlap (103-453:147-508)

             80        90       100       110       120       130  
pF1KB7 AFTPQGSGYANALGHHHHHHHHHHHTSQVPSYGGAASAAFNSTREFLFRQRSSGLSEAAS
                                     :::  ...:.. .  : : .  . ..    
XP_011 SLDLQRMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGALSPA--FTFPHPINPVAYQQI
        120       130       140       150         160       170    

            140       150       160        170            180      
pF1KB7 GGGQHGLFAGSASSLHAPAGIPEPPSYLLF-PGLHEQGAGHPSPTGHV-----DNNQVHL
        . :.::  ::: . :.:  :   :..:   :    .  . :.  .       :.:: . 
XP_011 LSQQRGL--GSAFG-HTPPLIQPSPTFLAQQPMALTSINATPTQLSSSSNCLSDTNQNKQ
          180          190       200       210       220       230 

        190       200       210       220       230       240      
pF1KB7 GLRGELFGRADPYRPVASPRTDPYAAGAQFPNYSPMNMNMGVNVAAHHGPGAFFRYMRQP
       . .. . . ..:       ..     : . :  ::. ...: .:..: . :  .   .. 
XP_011 SSESAVSSTVNPVAIHKRSKVKTEPEGLR-PA-SPLALTQG-QVSGHGSCGCALPLSQEQ
             240       250       260         270        280        

           250          260          270       280       290       
pF1KB7 I---KQELS---CKWIDEAQLSRPK---KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC
       .   :..:.   ::   :. . . .   ..: . ..:...:: :.. ::. : :... ::
XP_011 LADLKEDLDRDDCKQEAEVVIYETNCHWEDCTKEYDTQEQLVHHINNEHIHG-EKKEFVC
      290       300       310       320       330       340        

       300       310       320       330       340       350       
pF1KB7 YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP
        :. : :: : :::.: :: :.: ::::::  : : ::.: ..: :::: : :.::::::
XP_011 RWQACTREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKP
       350       360       370       380       390       400       

       360       370       380        390         400       410    
pF1KB7 FKCEFEGCDRRFANSSDRKKHMH-VHTSDKPYICKV--CDKSYTHPSSLRKHMKVHESQG
       . :: :::.. :.:.::: ::.. .:...::::::.  : : :: :::::::.:. ..  
XP_011 YVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPD
       410       420       430       440       450       460       

          420       430       440         450       460            
pF1KB7 SDSSPAASSGYESSTPPAIASANSKDTTKT--PSAVQTSTSHNPGLPPNFNEWYV     
       .  .    .  .  ::    ...:.  :.   : ....:..                   
XP_011 AHVTKKQRNDVHLRTPLLKENGDSEAGTEPGGPESTEASSTSQAVEDCLHVRAIKTESSG
       470       480       490       500       510       520       

XP_011 LCQSSPGAQSSCSSEPSPLGSAPNNDSGVEMPGTGPGSLGDLTALDDTPPGADTSALAAP
       530       540       550       560       570       580       




467 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 05:53:28 2016 done: Fri Nov  4 05:53:29 2016
 Total Scan time:  8.600 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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