GENSCAN 1.0	Date run:  4-Nov-116	Time: 05:53:54

Sequence gi568815575f:137466692_137670067 : 203376 bp : 41.12% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   7114   7225  112  0  1   65   37   113 0.181   4.32
 1.02 Term +  14920  15095  176  2  2   51   34   135 0.193   1.34
 1.03 PlyA +  15743  15748    6                               1.05

 2.00 Prom +  16181  16220   40                              -2.75
 2.01 Init +  19346  19424   79  1  1   68   26    77 0.320   0.77
 2.02 Intr +  24013  24120  108  2  0   91   97    38 0.558   4.34
 2.03 Intr +  27530  27567   38  0  2   97   80    49 0.588   2.06
 2.04 Intr +  31366  31531  166  0  1   61   69   122 0.505   6.21
 2.05 Intr +  40261  40335   75  2  0   64  116    19 0.107   0.87
 2.06 Term +  44237  44370  134  0  2   83   41    95 0.616   1.57
 2.07 PlyA +  44517  44522    6                               1.05

 3.12 PlyA -  45316  45311    6                               1.05
 3.11 Term -  48682  48460  223  0  1  108   43   158 0.905   8.71
 3.10 Intr -  51923  51818  106  0  1   80   31    81 0.090  -0.05
 3.09 Intr -  59186  59055  132  0  0   50   34   136 0.024   4.10
 3.08 Intr -  64384  64348   37  1  1   61   96    14 0.033  -3.58
 3.07 Intr -  77773  77636  138  1  0   62  116    97 0.849   9.64
 3.06 Intr -  79209  78967  243  0  0   -7   62   212 0.761   5.87
 3.05 Intr -  79339  79256   84  1  0   46   69    94 0.792   2.40
 3.04 Intr -  81105  80909  197  1  2   30   36   287 0.708  15.91
 3.03 Intr -  81790  81736   55  1  1   94   65    32 0.613  -0.87
 3.02 Intr -  83005  82869  137  2  2   96    6   141 0.959   6.07
 3.01 Init -  83465  83396   70  2  1   61   42   106 0.855   2.56
 3.00 Prom -  85603  85564   40                              -9.45

 4.00 Prom +  86869  86908   40                              -4.25
 4.01 Init +  92072  92125   54  1  0   56   77    35 0.018   0.53
 4.02 Intr +  96795  97057  263  2  2   86   77   314 0.976  25.46
 4.03 Intr +  97278  97382  105  0  0   73   65    75 0.214   2.11
 4.04 Intr +  98955  99349  395  0  2   64   60   301 0.792  18.27
 4.05 Intr +  99831 101060 1230  1  0  119  110  1047 0.889  96.36
 4.06 Intr + 102211 102374  164  2  2  121   86   241 0.961  25.97
 4.07 Intr + 103200 103369  170  2  2   47   88   129 0.901   6.62
 4.08 Intr + 105669 105778  110  0  2   -2   15    75 0.036  -9.79
 4.09 Intr + 107278 107428  151  2  1  102   89   120 0.989  11.80
 4.10 Intr + 107911 108024  114  1  0   63   87    84 0.953   4.44
 4.11 Intr + 108896 109049  154  2  1   15   94   183 0.500  10.75
 4.12 Intr + 110431 110494   64  0  1   70   64   108 0.045   3.97
 4.13 Intr + 111978 112048   71  1  2   78  121    27 0.094   2.98
 4.14 Intr + 122160 122276  117  2  0   76   34    86 0.550   1.74
 4.15 Intr + 134089 134337  249  0  0   89   54   180 0.158  11.41
 4.16 Term + 138705 139082  378  2  0   -2   48   253 0.210   6.10
 4.17 PlyA + 139614 139619    6                               1.05

 5.03 PlyA - 141062 141057    6                               1.05
 5.02 Term - 168324 168215  110  1  2   80   53    63 0.838  -0.31
 5.01 Init - 171509 171443   67  2  1   67   88    52 0.745   4.39
 5.00 Prom - 174312 174273   40                              -3.65

 6.00 Prom + 176466 176505   40                              -6.15
 6.01 Init + 190249 190316   68  0  2   62   95    81 0.881   6.80
 6.02 Intr + 192849 192994  146  0  2   25   80   133 0.951   5.21
 6.03 Term + 193877 194130  254  0  2   48   46   279 0.927  14.52
 6.04 PlyA + 194398 194403    6                              -0.45

 7.00 Prom + 194877 194916   40                             -12.13
 7.01 Sngl + 195033 195605  573  2  0   68   43   484 0.999  37.81
 7.02 PlyA + 198858 198863    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  91512  91222  291  0  0   76   48   207 0.846  10.90
S.002 Init +  95483  95485    3  1  0   66  101     0 0.956  -0.85
S.003 Term + 110431 110580  150  0  0   70   45   186 0.941   9.43


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:137466692_137670067|GENSCAN_predicted_peptide_1|95_aa
MLKGPCDWRVLNDEENMEGDEVQRGWQGPDVEGIIDQEQPFESMPQGSTFGDGSVNVCRI
WPFSYLRKEIKSDIRKGSFFRAAAALKIEARESCY

>gi568815575f:137466692_137670067|GENSCAN_predicted_CDS_1|288_bp
atgctcaaaggaccctgtgactggagggtcctgaatgatgaggaaaacatggaaggagat
gaggttcaaagaggttggcaaggaccagatgtggagggcattatagatcaggaacaaccc
tttgagtctatgccacagggctccacatttggtgatggctcagtcaatgtttgtcggatc
tggcccttctcttatttgaggaaagaaatcaaaagtgacataaggaaaggtagttttttc
agggcagctgcagctctcaagattgaagctcgagaaagctgctattga

>gi568815575f:137466692_137670067|GENSCAN_predicted_peptide_2|199_aa
MGCFITSYLEKSVPRRKEAGLDAIFFDIKIQSSDHTVLLSGMPFLSLFLCKFLSHILALS
PTGWDSYSKPDKGFQNTTDRLLYKEKEFIWLKVLETAELKNMAPAFGKDLCAASFHGRIW
NARKRKGEQETFISYCHLLELAACAGPAPECELLEELEKTTLNFIWNQKRACIAKTIRGK
KNKVGGIMLPDFKLYYRLQ

>gi568815575f:137466692_137670067|GENSCAN_predicted_CDS_2|600_bp
atgggctgtttcatcaccagttacttagagaaaagtgtgccaaggcgaaaggaagcaggc
ttggatgccattttctttgacataaaaattcagtcctcagatcatactgttttgctgtct
ggaatgcccttcctctcccttttcctgtgtaaattcttatcccacattctagccctatct
cctacaggatgggactcctacagtaaacccgacaaaggattccaaaataccacagacagg
ttgctttataaagaaaaagagtttatttggctcaaagttctggagactgcagagctcaag
aacatggcaccagcatttggcaaggacctttgtgctgcatcattccatggaagaatatgg
aatgcaaggaagcgcaagggagagcaagaaacattcatctcatattgccacctattagag
ttagctgcatgtgcaggccctgcccctgagtgtgagctccttgaagaattggaaaaaact
actttaaacttcatatggaaccaaaaaagagcctgcatagccaagacaatccgaggcaag
aagaacaaagttggaggcatcatgctacctgacttcaaactatactacaggctacagtaa

>gi568815575f:137466692_137670067|GENSCAN_predicted_peptide_3|473_aa
MRPRTLLAWLPERPPGPNEAPAHFSRDFPTLPREAVPTPEGPLNDMGLGRAQSPEPEAQL
ETPTGRKEPGLPSSSPCGLVPWRAGPAGVNQFKCELDGCSSRFANSCDWEMSTHAHMGDQ
LQASGKPVATRTQAEEQKETPAPGLTPEQPLPRLYTINICFQPDRSRFLTQLVPGVLQAY
VPLEHDSGTVREPAAAQPGNAHSLRESYRTHLAACESLARGTEAVQKMPYVPELPAMIIG
ISRALGSTSSLGLQRARSSVNKGQSSLIQWLIFTRNIRRLPQGDVGQQEDSVLPFISFPM
CSPVGKVKRCLLTYYVPPIAVFQQVKHKGSKKRPATMNQNSQTAPGEKEKPLTELRQVSM
DVHKVLILLDLAGIICAPAYEGLEGRAYSYYFQSPQYPKWTPADWMVPAHIGEGRSLLSP
LIQMPISSGTTFTDISRNNALSGYLNPVKLTPKINHHNYHLDADNCKWLPAFL

>gi568815575f:137466692_137670067|GENSCAN_predicted_CDS_3|1422_bp
atgaggccgcggacactgctggcctggctccccgagcgcccgcccggccctaacgaggcg
ccggcgcatttttcgagggacttccccacccttccgagagaggccgtccccaccccggag
gggccactaaatgacatgggccttggcagagctcagagccctgaaccagaggctcagcta
gagacgcccacaggcaggaaggaaccggggctcccctcttcttctccctgtggccttgtt
ccgtggagagcaggccctgccggcgtaaaccagttcaagtgtgaactcgacggctgtagt
agtcggtttgccaacagttgtgactgggagatgagcactcacgcgcatatgggcgaccag
ctccaggcctctgggaagcctgtggctacccgaacacaggcggaagagcagaaagaaacg
ccagcgccaggtctgacccccgagcagcctctgccgcggttgtacaccattaacatctgc
ttccagccagatcgaagtcgcttccttacccagcttgtccccggtgtgctacaagcctac
gtgcctctagagcacgactctggcactgtccgggagcccgctgcggcccagccggggaac
gcgcatagtctgagggaaagttacaggacgcacctggcagcttgcgagtcgctggcccga
gggaccgaggctgttcagaaaatgccttatgttccagagctcccggcgatgattattggt
atttcgagggcgcttgggtccacatctagcttgggtcttcaaagggcgaggtcaagtgta
aataagggccaatcctccttgatccagtggctcatctttacacggaacatccgaagactg
ccccaaggggatgtgggccaacaggaagattctgtccttcccttcatttcctttccaatg
tgttctccggtgggtaaagtgaagagatgcttacttacgtactatgtgcctcctattgca
gtatttcaacaagttaagcacaaaggaagtaaaaaacggccagcaacaatgaaccagaat
tcccagacagctccaggggagaaagagaagcctttgacagaattaagacaagtcagtatg
gatgtgcacaaagtccttatcttactggaccttgctggaatcatttgtgcacctgcctat
gagggccttgaaggaagggcttattcctactactttcagtctccccagtaccccaaatgg
accccagccgattggatggtgcctgctcatattggcgagggtagatctttactgagtcca
ctgattcaaatgccaatctcttctggaaccaccttcacagacatatccagaaataatgct
ttatctggatatctcaacccagtcaagttgacacctaaaattaaccatcacaactaccat
cttgatgcagacaactgcaagtggcttcctgcttttctatag

>gi568815575f:137466692_137670067|GENSCAN_predicted_peptide_4|1262_aa
MELLENTLASGTKSGYTLNNDTPSEPHSQDGPGCPVKGSIARDFGLAESPQVCPLNKHPP
PRPPPPHFSVDDLIELCLFVPGTTEHVLEAINYRNVAVSKRTLGTGLENRCPRDQLSEEI
QTFSNQLLSQGRLGLVGGEERICALQLQRGHVLKVVRQRGPKQDWTLSAASPPSAQQWDR
SSRGKEPARGGGKPARVPAASRRLPAGAWPQFPAATQARWSPLAAARQPPPHLPGTRRLP
NQRGSLGRGCHVLRSALPISLAAANGQSGRRSGDSCSDGKLQPLVAPWGSPRSVQPPPPL
SDYGTSEISSFAGTLSHFGRIACAQNVPPMTMLLDGGPQFPGLGVGSFGAPRHHEMPNRE
PAGMGLNPFGDSTHAAAAAAAAAAFKLSPAAAHDLSSGQSSAFTPQGSGYANALGHHHHH
HHHHHHTSQVPSYGGAASAAFNSTREFLFRQRSSGLSEAASGGGQHGLFAGSASSLHAPA
GIPEPPSYLLFPGLHEQGAGHPSPTGHVDNNQVHLGLRGELFGRADPYRPVASPRTDPYA
AGAQFPNYSPMNMNMGVNVAAHHGPGAFFRYMRQPIKQELSCKWIDEAQLSRPKKSCDRT
FSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCP
FPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYICK
VCDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAIASANSKDTTKTPSAVQTS
TSHNPGLPPNFNECLNAMNRDWDDYTCDEQVTWSVYHSQPRHSDLDLDIEGPLAAVSRRS
PGLRGRFAPHRLPASLGRRGCKAGISLCLIRTWGQYEPKQWRTLRSRRVGFCSEGVGDRV
ESRFAVPRPRSSWEGGEGRKISGTNSSRLGLRGDQRPNGKVSPLGVVQCHAFGLLKVWGS
SRGPPWEGPQCCPAWYPGQSLIPDEELDTDVEQELCSFRQAVEYNNGIVEKALGKKKTSN
RRVPCKVTVAQSQGEKVGKNWKRQEKRRKGMQVKQPCGMDILCTWERESTEIVRLCIELS
GALSQRKVEPSSISSHLPTEGEFGLALDSGESPIPVVRASALASLNVVWSALGPYVNINK
IDKPLAIPRKKRENTQINNIRDEKRDITTDTAEMQGIISGQFQLYASKLEKLEEMDKFPD
TYNLPRLNHEEIQNLNIPITGNEIKAIIKIISVKKSTGLDGFTGEFYQTFKEELIPILLK
LF

>gi568815575f:137466692_137670067|GENSCAN_predicted_CDS_4|3789_bp
atggagcttttggaaaacactttggcaagtggcacaaagtcaggctacactttgaacaac
gacaccccctcagaaccgcactctcaggatgggcccggctgtcccgtgaagggctccatt
gcccgggattttggcctggctgaatcgcctcaggtctgcccccttaacaagcatccaccc
ccccggcccccacctccccacttctcggttgatgatctaattgaattatgcctttttgtt
ccagggactacagagcacgtgctggaggcaattaattatcggaatgtggccgtatcaaaa
cggacactgggcaccggtctcgagaaccgctgtccgcgggaccagctcagtgaggaaatc
caaactttttcaaaccaactacttagccaagggcggttggggttggtgggaggtgaagag
aggatctgcgccctgcagctacagaggggacatgttctcaaggtggtgaggcagcggggg
cccaagcaggactggacgttgagcgccgcgtctcctccatcggcgcagcagtgggaccga
tcctcgcggggcaaagagcccgcgaggggtgggggaaagcccgcgagagtcccggcggcg
tcccgccgtttgccggctggagcctggccccagttccccgcagccactcaagcccggtgg
agcccactcgcggccgcccggcagccgccgcctcacctgccaggcacccggcggctgccc
aatcagcgggggtcgctcggccgcggctgccatgttctccgctccgcgctgccaatcagc
ctcgcggcggccaatgggcagtccggccggaggtcaggagactcttgcagtgacggaaag
ttgcagcccctggtagcgccttgggggtctccccgcagtgtccaaccgccgccacccctt
tccgactacggcacttcggagatctcctccttcgccggtaccctctctcacttcggccgg
atcgcctgtgcccagaacgtcccacccatgacgatgctcctggacggaggcccgcagttc
cctgggctgggagtgggcagcttcggcgcgccgcgccaccacgagatgcccaaccgtgag
ccggcaggcatggggctgaatcccttcggggactcaacccacgccgccgccgccgccgcc
gccgccgctgccttcaagctgagccctgccgcggcgcacgatctatcttcaggccagagc
tcggctttcacgccgcagggttcgggctacgccaacgccctgggccaccatcaccaccac
catcaccatcatcaccacaccagccaggtgcccagctacggtggcgctgcctctgccgcc
ttcaactcaacgcgcgagtttctgttccgccagcgcagctccgggctcagtgaggcggcc
tcgggtggcgggcagcacgggctcttcgccggctcggcgagcagcctgcatgctccagct
ggcatccccgagccccctagctacttgctgtttcccgggctgcatgagcagggcgctggg
cacccgtcgcccacagggcacgtggacaacaaccaggtccacctggggctgcgtggggag
ctgttcggccgtgctgacccataccgcccagtggccagcccgcgcacggacccctacgcg
gccggcgctcagtttcctaactacagccccatgaacatgaacatgggagtgaacgtggcg
gcccaccacgggcccggcgccttcttccgttatatgcggcagcctatcaagcaggagctg
tcgtgcaagtggatcgacgaggctcagctgagccggcccaagaagagctgcgaccggacc
ttcagcaccatgcatgagctggtgacacatgtcaccatggagcatgtggggggcccggag
cagaacaaccacgtctgctactgggaggagtgcccccgggagggcaagtctttcaaggcg
aagtacaaactggtcaaccacatccgagtgcacacgggcgagaagcccttcccatgcccc
ttcccgggctgcgggaagatctttgcccgttctgagaacctcaagatccacaagaggacc
cacacaggtgagaaacctttcaaatgtgaatttgaaggctgtgacagacgctttgccaac
agcagcgaccgtaagaagcacatgcatgtgcatacctcggacaagccctatatctgcaaa
gtgtgcgacaagtcctacacgcacccgagctccctgcgcaaacacatgaaggttcatgaa
tctcaagggtcagattcctcccctgctgccagttcaggctatgaatcttccactccaccc
gctatagcttctgcaaacagtaaagataccactaaaaccccttctgcagttcaaactagc
accagccacaaccctggacttcctcctaattttaacgaatgcctgaatgccatgaacaga
gattgggatgactacacatgtgatgagcaggtaacctggtcagtctatcactcccaaccc
agacattccgatcttgaccttgacattgaggggcccttggcggccgtaagccggcggtcg
cccgggctccgaggacgcttcgcgccccatcgcctcccagcctcattaggccggcggggc
tgtaaagcaggaatcagcctctgcctaatccggacctggggtcaatacgagcccaaacaa
tggcgcacacttcgcagccgtcgagtcggattttgcagcgagggggttggggatagagtt
gaaagccgctttgcagtgccgcggcctcggtcgagctgggagggaggggaggggaggaaa
ataagcggcacgaactcttccaggttgggtcttcgtggagaccaacggccaaacggaaaa
gtcagccctcttggggttgtccagtgtcacgcatttgggctcctgaaggtgtggggcagt
tcccgtgggccaccttgggaagggccccagtgttgtcctgcttggtatccgggacagtct
ctaattcctgacgaagaacttgatactgacgttgaacaagaactgtgttctttcagacag
gcagtggagtataataatggaattgttgaaaaagccctaggaaagaaaaaaacatctaac
agaagagtcccatgtaaggtgactgtagctcagtcacaaggcgagaaagtaggcaagaac
tggaagagacaagagaaaaggagaaaagggatgcaagtcaaacaaccctgtggcatggac
attctgtgtacttgggagagggagagcacagagattgtgaggctttgcattgaactcagt
ggtgccctgtcacagcggaaagtagaaccaagcagtattagttcacatctgcccacagag
ggagaatttggactggccctagacagtggggagtctcccatcccagtggtcagagcttca
gctctggcaagcctgaatgtggtctggagtgctctagggccctacgtgaatataaataaa
attgacaaacctttagccataccaagaaaaaaaagagagaatacccaaataaataacatc
agagatgaaaaacgtgacattacgactgatactgcagaaatgcaagggatcattagtggc
caattccaactatatgccagcaagttggaaaagctagaggaaatggataaattcccagat
acatataacctaccaagactgaaccatgaagaaatccaaaacctgaacataccaataaca
ggtaacgagatcaaagccataataaaaattatctcagtaaagaaaagcacaggacttgat
ggcttcactggtgaattctatcaaacatttaaagaagaactaataccaatcctactgaag
ctattctga

>gi568815575f:137466692_137670067|GENSCAN_predicted_peptide_5|58_aa
MKVGAKGTGMVMKAVFTVEVLEVHFEEKVQSLHSIAVRHTFHTLKEGNSKLVLKCLAD

>gi568815575f:137466692_137670067|GENSCAN_predicted_CDS_5|177_bp
atgaaagtgggagcaaagggaactggcatggtaatgaaggcagtctttactgtggaagta
ttagaagttcattttgaagaaaaagttcaaagtctacattctattgctgtcagacatact
tttcacaccttgaaggaagggaattcaaaattggttttgaagtgtcttgcagactga

>gi568815575f:137466692_137670067|GENSCAN_predicted_peptide_6|155_aa
MASADGVNFMGSEAFHEAGAMACLIQAKALTLFNSMKSERSEEAAEEKMEASRGRFMKFK
ERSHVHNIKVQRTLAVSHDPVKLVTTSPLPAEMDIPLFSGSITQVRSPVGSAMSLIPEDG
LPPILISTGVKGDYAVEDKPSQIYFRNAAVGRRWP

>gi568815575f:137466692_137670067|GENSCAN_predicted_CDS_6|468_bp
atggcatctgcagatggtgtgaacttcatgggcagtgaggcttttcatgaagctggagca
atggcctgcctaatccaggccaaggccctaactctcttcaattctatgaagtctgagaga
agtgaggaagctgcagaagaaaagatggaagctagcagaggtcgcttcatgaagtttaag
gaaagaagccatgtccataacataaaagtacaaagaaccctggctgtgtcacacgaccca
gtcaagctagtaactaccagtcctctaccagcagagatggatattcctctattctctggc
agtataactcaggtcagaagtcctgttggaagtgcaatgagccttattcctgaagatggc
cttcctcctattctcatctccactggtgtaaaaggagactatgctgtggaagataaacca
tcacagatttatttcagaaatgcagcagttggaagacggtggccctga

>gi568815575f:137466692_137670067|GENSCAN_predicted_peptide_7|190_aa
MKDFTITRGKAHAEDPQEHIHTQWVDDDKNVSKGVVSPIDGKSMETITNVKIFYGSECKA
NGKVIRWTEVFFPENPDQHNCLSDPADHSRLTEHVTKAFCLALCPHLKLLKEDGMTKLGL
RVTLDSDQVGYQAGRNGQPLPSQCMNDLDSALVPVIHGGACQLSEGSVVMELIVIFKSCH
GRLNHQQLAS

>gi568815575f:137466692_137670067|GENSCAN_predicted_CDS_7|573_bp
atgaaggacttcaccatcacccgtgggaaggcgcacgcagaggatccccaggagcacatc
cacacccaatgggtggatgatgacaagaacgttagcaagggcgtcgtaagtcctatagat
gggaagtccatggagactataacaaatgtgaagatattctatggatcagaatgtaaagca
aatggaaaagtcatcagatggacagaggtgtttttcccagaaaatcctgaccagcacaat
tgcctcagtgatcctgcagatcacagtagattgactgagcatgttaccaaggctttttgt
cttgctctctgtcctcacctgaagcttctgaaggaagatggaatgaccaaactgggacta
cgtgtgacacttgattcagatcaggtcggctatcaagcagggagaaatggccagcccctt
ccctcgcagtgcatgaatgatctggacagcgccttggtgccggtgatccatggaggggcc
tgtcagctcagtgagggctctgtcgtcatggaactcattgttatttttaaaagttgccac
ggccgcctcaaccatcagcaactagcatcctga