GENSCAN 1.0	Date run:  4-Nov-116	Time: 05:53:16

Sequence gi568815592f:38948841_39186070 : 237230 bp : 44.20% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    612    730  119  2  2   67   94    70 0.957   4.76
 1.02 Intr +   2478   2680  203  0  2   76   86   135 0.995  11.03
 1.03 Intr +  22752  22825   74  1  2   96   91    50 0.059   5.23
 1.04 Intr +  33506  33622  117  1  0   58   87    79 0.673   5.46
 1.05 Intr +  35366  35467  102  1  0   44   89   101 0.518   6.17
 1.06 Intr +  41172  41332  161  2  2   92  113    83 0.992   9.99
 1.07 Intr +  51788  51845   58  2  1  113  101     7 0.031   3.39
 1.08 Intr +  51962  52062  101  1  2   74   59    42 0.040  -1.19
 1.09 Intr +  59974  60130  157  1  1   85  107    45 0.714   6.11
 1.10 Intr +  63608  63797  190  1  1  102   95    25 0.907   3.76
 1.11 Intr +  69849  69947   99  1  0   68   86    82 0.756   6.08
 1.12 Intr +  77706  77827  122  1  2   89   49   108 0.892   7.21
 1.13 Intr +  81265  81548  284  0  2   69  108   132 0.883   9.52
 1.14 Intr +  84468  84582  115  0  1   60   99    66 0.668   5.35
 1.15 Term +  87666  87737   72  2  0   70   44    55 0.099  -2.79
 1.16 PlyA +  89721  89726    6                              -0.45

 2.06 PlyA -  90608  90603    6                               1.05
 2.05 Term -  91144  90828  317  2  2  -39   46   365 0.789  14.70
 2.04 Intr -  92262  92112  151  0  1  103  110    18 0.793   5.24
 2.03 Intr -  94422  94311  112  2  1   99   39    56 0.795   2.18
 2.02 Intr -  95173  95024  150  0  0   61   82    53 0.411   1.28
 2.01 Init -  97793  97753   41  2  2   91   85    19 0.558   1.56
 2.00 Prom -  98401  98362   40                              -6.46

 3.00 Prom +  99171  99210   40                              -8.56
 3.01 Init + 100001 100259  259  1  1  112   94   224 0.525  20.70
 3.02 Intr + 100710 100888  179  1  2   64   43    63 0.278  -0.96
 3.03 Intr + 107557 107653   97  0  1   86  109   102 0.998  11.68
 3.04 Intr + 108632 108739  108  0  0   78   77   149 0.854  13.06
 3.05 Intr + 116871 116989  119  1  2   54   70   154 0.975  10.38
 3.06 Intr + 117357 117463  107  2  2   88  110   209 0.993  22.11
 3.07 Intr + 124022 124175  154  2  1   68   89   225 0.871  20.67
 3.08 Intr + 124770 124929  160  2  1  119   78   241 0.993  25.76
 3.09 Intr + 129482 129542   61  0  1  143   84   108 0.999  13.69
 3.10 Intr + 130117 130186   70  1  1  100   84    98 0.990   9.78
 3.11 Intr + 130272 130360   89  2  2  100   64   133 0.999  10.87
 3.12 Intr + 130724 130862  139  2  1   92   62   221 0.999  20.37
 3.13 Intr + 131858 131899   42  1  0  101   99    19 0.841   2.74
 3.14 Term + 137066 137233  168  1  0   51   53   161 0.721   6.78
 3.15 PlyA + 139208 139213    6                               1.05

 4.03 PlyA - 141014 141009    6                               1.05
 4.02 Term - 156936 156592  345  0  0   93   48   181 0.075   9.09
 4.01 Init - 166372 166043  330  1  0   40   94   251 0.644  16.22
 4.00 Prom - 171368 171329   40                              -3.76

 5.06 PlyA - 171526 171521    6                              -0.45
 5.05 Term - 172636 172527  110  2  2   50   46    79 0.280  -1.43
 5.04 Intr - 178971 178855  117  1  0   82   68    62 0.464   4.04
 5.03 Intr - 182460 182367   94  0  1   99   70    20 0.611   0.84
 5.02 Intr - 184498 184260  239  2  2   48   65   104 0.321   1.43
 5.01 Init - 187146 187089   58  0  1   42  111    58 0.838   4.97
 5.00 Prom - 198698 198659   40                              -3.46

 6.06 PlyA - 200090 200085    6                               1.05
 6.05 Term - 212011 211922   90  1  0   83   43    73 0.163   0.02
 6.04 Intr - 223617 223472  146  1  2   95   48    80 0.284   4.70
 6.03 Intr - 223881 223730  152  2  2   73   57    61 0.423   1.31
 6.02 Intr - 224635 224603   33  0  0   92   84    35 0.269   0.84
 6.01 Init - 229917 229841   77  0  2   90   57    44 0.117   2.06

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  42001  42166  166  1  1   99   48    87 0.843   3.19


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:38948841_39186070|GENSCAN_predicted_peptide_1|657_aa
ISRNEKGWKSWFDKDAPEEEIIPDGYNDSLDTCHKLLLIRSWCPDRTVFQARKYIADSLE
EKYTEPVILNLEKTWEESDTRTPLICFLSMGSDPTNQIDALAKKLKLECRTISMGQGQEV
HARKLIQMSMQQERRKFGPLGWNIPYEFNSADFSASVQFIQNHLDECDIKKGVSWNTVRY
MIGEVQYGGRVTDDFDKRLLNCFARVWFSEKMFEPSFCFYTGYKIPLCKTLDQYFEYIQS
LPSLDNPEVFGLHPNADITWDRLVSGKQAQGSHRFYMMSMEKCLPQNQSLVPKRLGTAVL
KDVQEFLRLEMRYQSNTASAVLETITNIQPKESGGGVGETREAIVYRLSEDMLSKLPPDY
IPHENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFTELLERNAQFSTWIFEGRPNVFWM
TGFFNPQGHLDSCEWAPHVKQCGRGKPGQHGVMEGKEKESSFLTAMRQEVTRAHKGWALD
TVTIHNEVLRQTKEEITSPPGEGVYIYGLYMDGAAWDRRNGKLMESTPKVLFTQLPVLHI
FAINSTAPKDPKLYVCPIYKKPRRTDLTFITVVYLRTVLSPDHWILRGVALLCDIKYYPR
EMKVYVHTKTYIPVLIEALLEEPTIGNNPNAHQQHLALTADKNRGFEHSSLDLHPTF

>gi568815592f:38948841_39186070|GENSCAN_predicted_CDS_1|1974_bp
atatctcgtaatgagaaggggtggaaaagctggtttgataaagatgctccagaggaggaa
attatccctgatggatataatgattcactagatacctgccataaacttttacttatcagg
tcttggtgcccagaccgtactgtttttcaagcaagaaagtatattgcagattctttggag
gagaagtacacagaaccagttatcttaaatctggagaaaacttgggaagaaagtgatacc
cggacacctctgatatgcttcctgtccatgggatctgaccccaccaatcaaattgatgca
ttggccaagaaactgaaactggaatgtagaactatctcaatggggcaaggacaagaagta
catgctcgaaagctgattcagatgtcaatgcagcaggagcgacgaaaatttggcccctta
ggatggaatattccctacgaattcaattctgctgacttttcagccagtgttcagtttatt
cagaatcaccttgatgaatgcgatattaagaaaggtgtatcatggaatacggttcggtac
atgatcggagaagtacaatatggaggcagagtgacagatgactttgacaaacgtctactt
aattgctttgccagagtctggttcagtgagaagatgtttgaaccgtcattctgcttttat
actggatataaaatccccttatgcaaaaccttagaccagtattttgaatacatccagtca
ctgccatccctagataaccctgaagtctttgggcttcaccctaatgctgatatcacatgg
gaccgtctagtttcaggaaaacaagctcagggctcccacagattttacatgatgtctatg
gaaaaatgtcttccacaaaaccagtccctggtgccaaaaaggttgggaaccgctgtctta
aaggatgtgcaggagtttctcagattggagatgaggtatcagagtaacactgcttctgct
gttcttgaaacaattaccaacattcaacccaaagagagtggaggtggtgtgggagagacc
cgggaggctattgtttatagattatctgaagatatgctgagtaaactccctcctgattac
attcctcatgagaatctgagagatgctctggacaacatgtatgatgctcgtatacctcag
ctctggaaaagagtgtcttgggattcgtccacactgggcttctggttcactgaacttttg
gaaagaaatgctcagttttctacgtggatatttgaagggaggcctaatgtgttttggatg
actggtttctttaatccccaaggtcacctggactcttgtgaatgggctcctcatgtcaaa
cagtgtggaagagggaaaccaggacagcatggtgtcatggaaggcaaggagaaggagagt
agcttcctcacagcaatgaggcaagaagtgacccgtgcccacaaaggctgggcactggac
actgtgaccatccacaatgaagttctgagacagaccaaggaggagatcacgtcaccccct
ggggaaggtgtgtatatttatgggctctacatggatggagcagcctgggacagacggaat
gggaagctcatggaatccacccccaaggtactcttcacgcagttacccgtgctccacatc
tttgccattaactccacggcacccaaggaccccaagctgtatgtgtgtcctatttacaag
aaacccaggcgaactgatttgaccttcatcactgtggtatatttacgaacagtgttgtcc
ccggatcactggatcctgagaggagtggcccttttgtgtgacatcaagtattaccctaga
gaaatgaaagtgtatgtccatacaaagacatacattccagtgctcatagaagctttattg
gaagagccaacaattggaaataatccaaatgcccatcaacagcatctggctttgactgca
gataagaaccgaggttttgaacactcaagtcttgatttacatccaaccttctaa

>gi568815592f:38948841_39186070|GENSCAN_predicted_peptide_2|256_aa
MDGQEWMDKYPIQRLALARQSEDLLLREGRDLSSGPGIHFLPGEPGCQQVLGAKGGITRG
CLFSPLSSLLRVHQLCQVSSRQQVQLLMPRGSGAEHHFLAQTFMGRRRGQPSTRIFSEKN
GPGARSGEAAAGFQGQGLAPALSKAASESPPDKEWCSITKSPCQVKDMKIKSLKVYLFSL
SIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKE
LLIAVCRTNILSIILV

>gi568815592f:38948841_39186070|GENSCAN_predicted_CDS_2|771_bp
atggatggacaggagtggatggataaataccccatccagaggctggcccttgccagacag
tctgaagatctgctgctgagagaaggcagagacctcagcagtgggccaggaatccacttt
ctgccaggagaacctggctgccagcaagtcctgggggcaaaggggggtatcacgagagga
tgcctctttagccctctatcttccctgctgcgggtgcaccagctgtgccaggtctcatcc
aggcagcaagtacagctgctaatgcccaggggctctggtgcagaacatcacttcctggct
cagaccttcatggggaggagaagaggccagccaagcacccgaattttctctgaaaagaat
ggccctggagccaggagtggggaagctgctgctggctttcagggacaaggattagcacca
gcactgagtaaagctgcctcagagtcccccccagacaaggagtggtgctccatcaccaag
tcaccttgccaggtcaaggacatgaagatcaaatccctgaaggtctatctcttctctctg
tccatcaaggagtttgaggtcactgacttcctcctgggggtgcccctcaaggacaaggtt
ctgaagctcatgtttgtgcaaaagcagcccaaggctggccggcggatcaggttcaaagtg
attgtcaccataagggactgcaatgataacgtcagtctgggtgttgagtggcccaaggag
ttactcattgctgtctgcaggaccaacatcctctccatcatcctggtgtag

>gi568815592f:38948841_39186070|GENSCAN_predicted_peptide_3|583_aa
MAGAPGPLRLALLLLGMVGRAGPRPQVRSRDPDDTGGGGWLCGLQAQCPGGGPRDLNETP
RPLAGASESLGGSRDWRLGAPGLEGPASVANRQKAQCPPGSSQAPPLTHSADLPFSSCTD
SRPQEKAYWDTQEHLGSLVPPESRPQGATVSLWETVQKWREYRRQCQRSLTEDPPPATDL
FCNRTFDEYACWPDGEPGSFVNVSCPWYLPWASSVPQGHVYRFCTAEGLWLQKDNSSLPW
RDLSECEESKRGERSSPEEQLLFLYIIYTVGYALSFSALVIASAILLGFRHLHCTRNYIH
LNLFASFILRALSVFIKDAALKWMYSTAAQQHQWDGLLSYQDSLSCRLVFLLMQYCVAAN
YYWLLVEGVYLYTLLAFSVLSEQWIFRLYVSIGWGVPLLFVVPWGIVKYLYEDEGCWTRN
SNMNYWLIIRLPILFAIGVNFLIFVRVICIVVSKLKANLMCKTDIKCRLAKSTLTLIPLL
GTHEVIFAFVMDEHARGTLRFIKLFTELSFTSFQGLMVAILYCFVNNEVQLEFRKSWERW
RLEHLHIQRDSSMKPLKCPTSSLSSGATAGSSMYTATCQASCS

>gi568815592f:38948841_39186070|GENSCAN_predicted_CDS_3|1752_bp
atggccggcgcccccggcccgctgcgccttgcgctgctgctgctcgggatggtgggcagg
gccggcccccgcccccaggtgagatccagggaccccgacgacaccgggggaggcgggtgg
ctctgcgggctgcaggcgcagtgtcctggtggagggccccgggacttgaacgaaactccg
agaccgctggcgggggcatccgaaagcctcggggggagtagggactggagacttggtgcc
cctgggctggaaggcccagcctctgtagcaaacaggcagaaggctcagtgcccccctgga
agcagccaggcgcccccactcacccactctgctgacctcccattctcatcctgcactgac
agcaggccccaagagaaggcatactgggacacgcaagaacacctgggctccttggtgcca
ccagagagcaggccacagggtgccactgtgtccctctgggagacggtgcagaaatggcga
gaataccgacgccagtgccagcgctccctgactgaggatccacctcctgccacagacttg
ttctgcaaccggaccttcgatgaatacgcctgctggccagatggggagccaggctcgttc
gtgaatgtcagctgcccctggtacctgccctgggccagcagtgtgccgcagggccacgtg
taccggttctgcacagctgaaggcctctggctgcagaaggacaactccagcctgccctgg
agggacttgtcggagtgcgaggagtccaagcgaggggaaagaagctccccggaggagcag
ctcctgttcctctacatcatctacacggtgggctacgcactctccttctctgctctggtt
atcgcctctgcgatcctcctcggcttcagacacctgcactgcaccaggaactacatccac
ctgaacctgtttgcatccttcatcctgcgagcattgtccgtcttcatcaaggacgcagcc
ctgaagtggatgtatagcacagccgcccagcagcaccagtgggatgggctcctctcctac
caggactctctgagctgccgcctggtgtttctgctcatgcagtactgtgtggcggccaat
tactactggctcttggtggagggcgtgtacctgtacacactgctggccttctcggtctta
tctgagcaatggatcttcaggctctacgtgagcataggctggggtgttcccctgctgttt
gttgtcccctggggcattgtcaagtacctctatgaggacgagggctgctggaccaggaac
tccaacatgaactactggctcattatccggctgcccattctctttgccattggggtgaac
ttcctcatctttgttcgggtcatctgcatcgtggtatccaaactgaaggccaatctcatg
tgcaagacagacatcaaatgcagacttgccaagtccacgctgacactcatccccctgctg
gggactcatgaggtcatctttgcctttgtgatggacgagcacgcccgggggaccctgcgc
ttcatcaagctgtttacagagctctccttcacctccttccaggggctgatggtggccata
ttatactgctttgtcaacaatgaggtccagctggaatttcggaagagctgggagcgctgg
cggcttgagcacttgcacatccagagggacagcagcatgaagcccctcaagtgtcccacc
agcagcctgagcagtggagccacggcgggcagcagcatgtacacagccacttgccaggcc
tcctgcagctga

>gi568815592f:38948841_39186070|GENSCAN_predicted_peptide_4|224_aa
MLSRGFCHAGARRPARAERRQLLCGLRARAPLSANGREARAMEQRLAEFRAARKRAGLAA
QPPAASQGAQTPGEKAEAAATLKAAPGWLKRFLVWKPRPASARAQPGLVQEAAQPQGSTS
ETPWNTAIPLPSCWDQSFLTNITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTR
GPEEKKEGEKSAYSVFNPGCEAIQGTLTAEQLERELQLRPLAGR

>gi568815592f:38948841_39186070|GENSCAN_predicted_CDS_4|675_bp
atgctcagcaggggcttctgccacgcaggcgcacggcggccggcgcgggccgagcggagg
caactgctgtgcggcctgcgggcgcgcgctcccttatcggccaacggacgcgaggcgcgc
gccatggaacagcggttagctgagtttcgggcggcgcggaaacgggcgggtctggcggcc
caaccccctgctgccagtcagggcgcacaaaccccaggagagaaggcggaagcagcagcg
actctaaaggcagccccaggctggctaaagcggttcctggtatggaaacctaggcccgcg
agtgcccgggcccagcccggcctagttcaggaagcggctcagccccagggcagcacatca
gagacaccatggaacacagccattcctctgccgtcgtgctgggaccagtctttcctgacc
aatatcaccttcttgaaggttcttctctggttggtcctgctgggactgtttgtggaactg
gaatttggcctggcatattttgtcctgtccttgttctattggatgtacgtcgggacacga
ggccctgaagagaagaaagagggagagaagagcgcctactctgtgttcaatccaggctgt
gaagccatccagggcaccctgactgcagagcagttggagcgcgagttacagttgagaccc
ctggcagggagatag

>gi568815592f:38948841_39186070|GENSCAN_predicted_peptide_5|205_aa
MTLGPQINQPEEHLANFKSGTTVNIYTDSKYVFHILHHLAVIWAETGFLTMQWSSIINAS
LIKTRLKAALLPKKAGVIHCEGHQKASDPIAQGNAYADKKDATNQGPSEKNGSFPNNSIC
SEKQGISLWKKHSTMEMSTIEPPTMESSTMGPSTMESLTTEPSMSLAALEIRVSLREVGE
STCDFQEEEEKSGWLSNGHSFILEQ

>gi568815592f:38948841_39186070|GENSCAN_predicted_CDS_5|618_bp
atgaccttgggtcctcagatcaaccagcccgaggaacatctcgccaatttcaaatcaggg
actacagtcaatatttatactgactctaaatatgtcttccatatcctgcaccaccttgct
gttatatgggctgaaacaggtttcctcactatgcaatggtcttccatcattaatgcctct
ttaataaaaactcgtctcaaggctgctttgcttccaaagaaagctggagttattcactgt
gagggccatcaaaaggcatcagatcccatcgctcagggcaacgcttatgctgataagaaa
gatgctacaaaccaagggccgagtgagaagaatggttcatttccgaacaattcaatctgc
tccgagaaacaaggaattagcctgtggaagaaacactccaccatggaaatgtctaccata
gaacccccaaccatggaatcctccaccatggggccctccaccatggaatccctcaccaca
gagccttccatgtctttagcagctctggaaattcgagtgagtttaagggaagtaggggag
agtacctgtgacttccaggaggaagaggagaaatcaggttggctgtccaatggacacagt
tttattctggaacagtga

>gi568815592f:38948841_39186070|GENSCAN_predicted_peptide_6|165_aa
MKKPVGAKDPAVLLTLPPISNNIPLRPGSYGAAASRGTFSNNTSGFQSGLIHPHSQETFG
NLWEGVGVPLASHGSSPGMLLNVLQCPDKTSMESRGPKRQPLPAKAGMSCPDSPQGPSPW
NLLVLAVLAFSESDNLPSVFLHLRDTSLVTMGGTIVSCEGLEFSA

>gi568815592f:38948841_39186070|GENSCAN_predicted_CDS_6|498_bp
atgaaaaagcctgtaggtgcaaaagaccctgctgtgctcctcactttgcccccaatatcc
aacaacatcccactgaggccaggcagctacggtgcagctgcttcccgggggaccttttcc
aacaacaccagtggttttcagtcaggattgattcacccacactcccaggagacgtttggc
aacttgtgggagggagtaggggtgccactggcatctcatgggtcgagcccagggatgctg
ctcaacgtcctacaatgcccagataaaacaagcatggagagcaggggccccaaaaggcag
ccattgccagcaaaggctgggatgagctgcccagacagcccgcagggcccaagcccctgg
aatctgctggtgttggctgttttggccttctcagagtcagataacctgccctctgtcttc
ctccatcttcgtgacacctccctggtcacaatgggaggaaccatcgtctcctgtgagggc
ctggagttttctgcctag