GENSCAN 1.0	Date run:  4-Nov-116	Time: 05:50:15

Sequence gi568815587f:30131903_30333797 : 201895 bp : 38.21% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  16767  16833   67  2  1   39  119    62 0.457   5.69
 1.02 Intr +  41139  41318  180  1  0   77   92    32 0.013   1.42
 1.03 Term +  45371  45558  188  0  2   86   48    95 0.030   1.97
 1.04 PlyA +  46183  46188    6                               1.05

 2.00 Prom +  46360  46399   40                              -9.15
 2.01 Init +  47941  48292  352  0  1   54   77   205 0.422  13.37
 2.02 Intr +  49120  50107  988  2  1   28   72   417 0.176  23.09
 2.03 Intr +  50424  51323  900  0  0   31   39   355 0.062  14.38
 2.04 Intr +  57688  57808  121  1  1   68  115    92 0.049   9.48
 2.05 Intr +  78629  78708   80  1  2   94   75    76 0.157   4.33
 2.06 Term +  86519  86744  226  2  1   66   53   171 0.088   6.67
 2.07 PlyA +  89809  89814    6                               1.05

 3.00 Prom +  99077  99116   40                              -3.75
 3.01 Init + 100001 100159  159  1  0   79   73    98 0.915   5.74
 3.02 Term + 101668 101898  231  0  0   99   43   154 0.982   7.49
 3.03 PlyA + 102829 102834    6                               1.05

 4.04 PlyA - 103099 103094    6                               1.05
 4.03 Term - 114016 113870  147  1  0   47   53   131 0.417   2.42
 4.02 Intr - 124526 124412  115  1  1  114   76    63 0.324   7.23
 4.01 Init - 131547 131399  149  0  2   83   23    80 0.234   0.61
 4.00 Prom - 132371 132332   40                              -5.15

 5.02 PlyA - 132488 132483    6                               1.05
 5.01 Sngl - 134106 133441  666  0  0   66   43   327 0.994  21.92
 5.00 Prom - 134311 134272   40                              -8.05

 6.03 PlyA - 134471 134466    6                               1.05
 6.02 Term - 136290 136063  228  0  0   65   54   260 0.748  15.95
 6.01 Init - 143085 143071   15  0  0   90   92     6 0.465   1.66
 6.00 Prom - 143586 143547   40                              -6.45

 7.00 Prom + 145821 145860   40                              -2.35
 7.01 Init + 150475 150647  173  0  2   68   77   129 0.426   8.80
 7.02 Intr + 163524 163695  172  0  1   74    9   107 0.230   0.42
 7.03 Term + 163794 164006  213  2  0   22   42   254 0.531  10.45
 7.04 PlyA + 164665 164670    6                               1.05

 8.00 Prom + 169043 169082   40                              -1.65
 8.01 Init + 175920 175995   76  2  1   47   93    65 0.412   4.20
 8.02 Intr + 188450 188595  146  0  2   83   73    25 0.276  -0.42
 8.03 Intr + 188938 189005   68  0  2   87  105    39 0.608   2.28
 8.04 Intr + 190367 190488  122  2  2   82   36    54 0.433  -1.18
 8.05 Term + 191204 191595  392  0  2   71   45   329 0.934  21.06
 8.06 PlyA + 193883 193888    6                               1.05

 9.00 Prom + 198393 198432   40                              -9.95
 9.01 Init + 199050 199472  423  2  0   69   42   201 0.261   9.99
 9.02 Intr + 200964 201091  128  2  2   92   96    58 0.382   5.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  57743  57808   66  1  0  108  115    72 0.877  13.04
S.002 Term +  86533  86744  212  2  2   81   53   183 0.892  10.57
S.003 Init + 108222 108331  110  2  2  107   22   102 0.830   5.24
S.004 Term + 108395 108587  193  2  1   44   43   131 0.812   0.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:30131903_30333797|GENSCAN_predicted_peptide_1|144_aa
MIQWVVSRDDFCGCIDIIIEKPARQEPTQDACLSFHRRASSRARAQSQPLCSTHEASAPN
FSNPTLPAFRGNVLVRCWSLLICHTEARGGFPQSWEVPPLWLCRVQLSWAGVECLQLFQA
HDANCQWIYHSGVWRTVTLFSQFH

>gi568815587f:30131903_30333797|GENSCAN_predicted_CDS_1|435_bp
atgattcagtgggtagttagcagggatgatttctgtggctgcattgacattatcattgaa
aagcctgcaaggcaggagcccacacaggatgcctgcctcagctttcaccggagagcatca
tcaagggccagagcccagtctcagcctctctgctccactcatgaggcctctgctccaaac
ttctcaaaccctacacttcctgctttcagaggaaatgttcttgtgcgttgctggagtttg
ctaatatgtcacactgaggcaagaggtgggttcccacagtcttgggaagttccacccctg
tggctttgcagagtacagctttcatgggctggtgttgagtgtctgcagcttttccaggca
catgatgcaaactgtcagtggatctaccattctggggtctggaggacagtgactctcttc
tcacagttccactag

>gi568815587f:30131903_30333797|GENSCAN_predicted_peptide_2|888_aa
MEDEMNEMKQEEKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTLQD
IIQENFPNLERQANIQIQEIQRTPQRYSLRRETPRHKIVRFTKVEMKEKMLRAAREKDRS
TRQKVNKDTQEMNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSKADHIVGSKAFLSK
CKRTEIITNCLSDHSAVKLELRIKKLTQNRSTTWKLNNLLLNDYWVNNEMKAEIKMFFET
NENKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELEKQEQTHSKASR
RQEITKIRAELKEIQTQKTLQKINESRRWFLERINKIDRLLARLIKKKREENQIDAIKND
KGDITTDPTEIQTTIRESYKHLYKNKLENLEEMNKFLDTYIFPRLNQEEAESLNRPITGS
EIEAIINSLPTKKSPGPDGFTAEFYQRTNDINHTIISIDAEKAFDKMQQLFMLKTLSKLG
IDGSYLKIIRAIYDKPTANIILNGQKLEAFPLKTGARQGCPLSPLLFNVVLEVLARAIRQ
EKEIKGIQLGKEEVKLSLFAHDMIVYLENPIISAQNLLKLISNFSKVSGYKINVQKSQAF
LYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKEKYKPLLNEIKEDTNKWKN
IPCSWIGRINIVKMAILPKVIYRFNAIPIKPPITFFTELEKTTLKFIWNQKRARIAKSIL
SQKNKAGGITLPDFKLYYKATVTKTAWWPICREYVFFTALNHPGNMAFMVPLTMDVASET
HTACDHMATKYQGMLSDSSSAADSKAPEHLRLNSSHSLGPGNYLRAVLTAHDASCMNAKV
LANNAGVELHEWERDAGFPDEIEECSSPSNAVPYFVTEPQRKQFFHLP

>gi568815587f:30131903_30333797|GENSCAN_predicted_CDS_2|2667_bp
atggaagatgaaatgaatgaaatgaagcaagaagagaagtttagagaaaaaagaataaaa
agaaacgaacaaagcctacaagaaatatgggactatgtgaaaagaccaaatctacgtctc
attggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagaaaggcaggccaacattcaaattcaggaaata
cagagaactccacaaagatactctttgagaagagaaactccaagacacaaaattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaagacagatca
acgagacagaaagttaacaaggatacccaggaaatgaactcagctctgcaccaagcggac
ctaatagacatctacagaactctccaccccaaatcaacagaatatacattcttttcagca
ccacaccacacctattccaaagctgaccacatagttggaagtaaagcattcctcagcaaa
tgtaaaagaacagaaattataacaaactgtctctcagaccacagcgcagtcaaactagaa
ctaaggattaagaaactcactcaaaaccgctcaactacatggaaactgaacaacctgctc
ctgaatgactactgggtaaataacgaaatgaaggcagaaataaagatgttctttgaaacc
aatgagaacaaagacacaacataccagaatctctgggacacattcaaagcagtgtgtaga
gggaaatttatagcactaaatgcccacaagagaaagcaggaaagatctaaaattgacacc
ctaacatcacaattaaaagaactagaaaagcaagagcaaacacattcaaaagctagcaga
aggcaagaaataactaaaatcagagcagaactgaaggaaatacagacacaaaaaaccctt
caaaaaattaatgaatccaggagatggtttttggaaaggatcaacaaaattgatagactg
ctagcaagactaataaagaagaaaagagaggagaatcaaatagatgcaataaaaaatgat
aaaggggatatcaccactgatcccacagaaatacaaactaccatcagagaatcctataaa
cacctctacaaaaataagctagaaaatctagaagaaatgaataaattccttgacacatac
atcttcccaagactaaaccaggaagaagctgaatctctgaatagaccaataacaggctct
gaaattgaggcaataatcaatagcttaccaaccaaaaaaagtccaggaccagatggattc
acagctgaattctaccagagaaccaacgacataaaccacacgattatctcaatagatgca
gaaaaggcctttgacaaaatgcaacaactcttcatgctaaaaactctcagtaaattaggt
attgatgggtcgtatctcaaaataataagagctatttatgacaaacccacagccaatatc
atactgaatgggcaaaaactggaagcattccctttgaaaactggcgcaagacagggatgt
cctctatcaccactcctattcaacgtagtgttggaagttctggccagggcaataaggcag
gagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtccctctttgca
catgacatgattgtatatctggaaaaccccatcatctcagcccaaaatctcctcaagctg
ataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattc
ttatacaccaataacagacaaacagagagccaaatcatgagtgaactcccattcacaatt
gcttcaaagagaataaaatacctaggaatccaattgacaagggatgtgaaggacctcttc
aaggagaaatacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaac
attccatgctcatggataggaagaatcaatatcgtgaaaatggccatactgcccaaggta
atttatagattcaatgccatccccatcaagccaccaataactttcttcacagaattagaa
aaaactaccttaaagttcatatggaaccaaaaaagagcccgcatcgccaagtcaatccta
agccaaaagaacaaagctggaggcatcacgctacctgacttcaaactatactacaaggct
acagtaaccaaaacagcatggtggcccatatgcagagaatatgtgttcttcactgccctc
aaccatccaggaaacatggccttcatggtcccactgaccatggatgtggcttcagagacc
cacactgcctgtgaccacatggcaacaaagtaccagggaatgctcagtgactcatcctct
gcagctgattcgaaggcacctgagcacctcaggctgaacagctctcattccctaggaccc
gggaactacttgagagcagtcctcactgcacatgatgccagctgcatgaatgccaaagtt
cttgccaacaatgctggtgttgaactacatgaatgggagagggatgctggcttccctgat
gaaatagaagaatgctcctctccctctaacgctgtgccctactttgtcactgagccccaa
agaaaacagttctttcatctgccttga

>gi568815587f:30131903_30333797|GENSCAN_predicted_peptide_3|129_aa
MKTLQFFFLFCCWKAICCNSCELTNITIAIEKEECRFCISINTTWCAGYCYTRDLVYKDP
ARPKIQKTCTFKELVYETVRVPGCAHHADSLYTYPVATQCHCGKCDSDSTDCTVRGLGPS
YCSFGEMKE

>gi568815587f:30131903_30333797|GENSCAN_predicted_CDS_3|390_bp
atgaagacactccagtttttcttccttttctgttgctggaaagcaatctgctgcaatagc
tgtgagctgaccaacatcaccattgcaatagagaaagaagaatgtcgtttctgcataagc
atcaacaccacttggtgtgctggctactgctacaccagggatctggtgtataaggaccca
gccaggcccaaaatccagaaaacatgtaccttcaaggaactggtatacgaaacagtgaga
gtgcccggctgtgctcaccatgcagattccttgtatacatacccagtggccacccagtgt
cactgtggcaagtgtgacagcgacagcactgattgtactgtgcgaggcctggggcccagc
tactgctcctttggtgaaatgaaagaataa

>gi568815587f:30131903_30333797|GENSCAN_predicted_peptide_4|136_aa
MDETGNHHSQQTIARTENQTPHVLTRRWELNNENTWTQEGEHYTLGPVVGESTRKYLMNS
EVEMYLWQEACSGFLGQSREESAIGKEQGNTFTDSSVQSIDIFVGHYPAYRHRLHNLKVN
PDMACDSLEEMQHDGA

>gi568815587f:30131903_30333797|GENSCAN_predicted_CDS_4|411_bp
atggatgaaactggaaaccatcattctcagcaaactatcgcaaggacagaaaaccaaaca
ccgcatgttctcactcgtaggtgggaactgaacaatgagaacacatggacacaggaaggg
gaacattacacactggggcctgttgtgggtgagagcaccagaaagtatttgatgaattct
gaagttgaaatgtacctgtggcaagaagcttgttcagggttcttaggacaatctagagaa
gagtcagctataggaaaggagcagggtaatacattcacagattccagtgttcagagcata
gatatctttgtgggtcattatcctgcttaccgccacaggttacataatcttaaagttaac
cctgatatggcttgtgattcactagaagaaatgcagcacgatggagcctga

>gi568815587f:30131903_30333797|GENSCAN_predicted_peptide_5|221_aa
MKNDKGDITTNPTEIQTTIREYYKHLYANKLENLEEMDKFLNTYILPRLNREEVESLNRP
ITGSEIEAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSTEKEGILPKSFYEA
SIILIPKPGRDTTKKENFRPISLMNINAKILNKILANRIQQPIKKLIHHDQMGFISGMQG
WFNIHKSINVIHHINRTKDKNHMIISIDAEKAFDKIQQPSS

>gi568815587f:30131903_30333797|GENSCAN_predicted_CDS_5|666_bp
atgaaaaatgataaaggggatatcaccaccaatcccacagaaatacaaactaccatcaga
gaatactataaacacctgtatgcaaacaaactagaaaatctagaagaaatggataaattc
ctcaacacatacatcctcccaagactaaaccgggaagaagttgaatctctgaatagacca
ataacaggctctgaaattgaggcaataatcaatagcttaccaaccaaaaaaagtccagga
ccagatggattcacagccgaattctaccagaggtacaaagaggagctggtaccattcctt
ctgaaactattccaatcaacagaaaaagagggaatcctccctaagtcattttatgaggcc
agcatcatcctaataccaaaacctggcagagacacaaccaaaaaagagaattttagacca
atatccttgatgaacattaatgcaaaaatcctcaataaaatactggcaaacagaatccag
cagcccatcaaaaagcttatccatcatgatcaaatgggcttcatctctgggatgcaaggc
tggttcaacatacacaaatcaataaatgtaatccatcatataaacagaaccaaagacaaa
aaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaaccttca
tcctag

>gi568815587f:30131903_30333797|GENSCAN_predicted_peptide_6|80_aa
MLIVNECSSSPAMEQSWTENDFDELREEGFRRSNYSELQEEIRTNGKEVKSFEKKLDKWI
SRITNAEKSLKDLMELKTKA

>gi568815587f:30131903_30333797|GENSCAN_predicted_CDS_6|243_bp
atgctcattgttaacgaatgcagctcctcaccagcaatggaacaaagctggacggagaat
gactttgacgagttgagagaagaaggcttcagacgatcaaactactccgagctacaggag
gaaattcgaaccaatggcaaagaagtaaaaagctttgaaaaaaaattagacaaatggata
agtaggataaccaatgcagagaagtccttaaaggacctgatggagctgaaaaccaaggca
tga

>gi568815587f:30131903_30333797|GENSCAN_predicted_peptide_7|185_aa
MAAGHASLYKAGPGRMWSVCRPQPLPEGALHPGTPNKGNAGAAPVIEGGSPKAQERTWSI
NGRLQLTMGESSRRVDPADRHVPTHPHSPTITASPELLCQYALTHSCTPFFVYMWHQLAN
KGRWSHTPPPSLNCITTTTGKIALHRGQQFCIHQHPNPTPTTTSANIHTDASGLAPLLQV
VTDAL

>gi568815587f:30131903_30333797|GENSCAN_predicted_CDS_7|558_bp
atggcagcagggcatgcctccctctacaaggctggtccaggaaggatgtggtcagtctgc
cggccacagcctctgcctgagggagcgctgcatcctggaacacctaacaaaggaaatgca
ggtgcagcaccagtgatcgaagggggctcccctaaggcacaggaaaggacatggtccatc
aacggccgactgcaactgaccatgggggagagctccagaagagtggaccctgcagataga
catgtaccaacccaccctcactctcccaccatcacagcctctcctgagctgctctgccag
tacgcacttacccacagctgcacccccttctttgtttacatgtggcatcaacttgcaaac
aaaggccggtggtcccacaccccacccccttccctgaactgcatcaccactaccactggc
aaaattgccctacatagaggccagcagttctgcatccaccagcaccccaaccccacacca
accaccaccagtgcaaacatccacactgatgccagtggccttgctcccctgctccaggtt
gtcactgatgcactgtga

>gi568815587f:30131903_30333797|GENSCAN_predicted_peptide_8|267_aa
MYLMATVLDSTAVATNGMHNSHDDKGIIFPIPPSSKDRTTTHRLTSPKTLIFQLRSLSYP
ALFFQLPAVYLHLEILVAPLAGTATMFLDITKSSGRSSRHQIACLVGEQYESGGRTIDAL
QKTAYSRCRELLARLGLVVARGLAGKRSVECGLCGLASCPKPGGGELKLRWKGNGGGPGE
EWESGDRPLGGEGARRRNGGTRGEVEEEARTREGDFQLLAGASHPYPRVVHLRRNALCQS
PAQVLPPLTSLRVVACPVGPGPSKLRF

>gi568815587f:30131903_30333797|GENSCAN_predicted_CDS_8|804_bp
atgtacctaatggccactgtactggacagcacagcagtagccactaatggaatgcataat
tctcatgatgataaaggtatcatcttccctatcccacccagctccaaagatagaactacc
actcacagactaacatctcccaaaactcttatcttccagctgagatccctctcttatcct
gccctcttcttccagctgccagctgtatatcttcacttggagatactagtagcacccctt
gctggtacagccacaatgtttctagacattaccaaatccagtgggaggagttctaggcat
caaatcgcttgcctagtcggcgagcagtatgaaagtggtgggaggaccatagacgcactg
cagaaaacagcttacagtagatgcagagaattactagcacgcttgggccttgtggtagcg
cggggactggctgggaagcggtcggtcgagtgtggcctgtgtggactcgcatcttgcccg
aagccgggcggaggagagctcaagctaaggtggaaggggaacgggggaggccctggagag
gagtgggagagtggagacaggcccctgggtggcgagggagcccggcggcgtaacggggga
acccggggagaggtggaagaggaggcccgcacacgtgagggggatttccagctgctggcc
ggggcctctcacccctacccccgcgtagttcatctgcgacgcaacgccttgtgtcaaagc
ccagcacaggttctgccgcctctgacctctctgagggtcgtcgcctgtcctgtaggccca
ggaccttcaaagctacgattttga

>gi568815587f:30131903_30333797|GENSCAN_predicted_peptide_9|184_aa
MDPCSVGVQLRTTNECHKTYYTRHTGFKTLQELSSNDMLLLQLRTGMTLSGNNTICFHHV
KIYIDRFEDLQKSCCDPFNIHKKLAKKNLHVIDLDDATFLSAKFGRQLVPGWKLCPKCTQ
IINGSVDVDTEDRQKRKPESDGRTAKALRSLQFTNPGRQTEFAPETGKREKRRLTKNATA
GSDS

>gi568815587f:30131903_30333797|GENSCAN_predicted_CDS_9|552_bp
atggatccatgttcagttggagtccagcttcgtactacaaatgagtgccataaaacctac
tatactcgtcacacaggttttaagactttgcaagaattgtcatcaaatgatatgctttta
cttcaacttagaactggaatgacactttctgggaacaatacaatttgctttcatcatgta
aaaatttacattgacagatttgaggatttacagaagtcatgttgtgacccatttaacata
cacaagaaattagccaaaaaaaatttgcatgtaattgacttagatgatgccacttttctg
agtgctaaatttggaagacagcttgtacctggttggaagctttgtccaaaatgcacacag
ataatcaatggaagtgtggatgttgatactgaagaccgccagaaaaggaaacctgagtca
gatggaagaactgctaaagctttgaggtcattacaatttacgaatccaggaaggcaaact
gaatttgctccagaaactggtaaaagagaaaaaagaaggcttacaaaaaatgcaaccgct
ggttcagacagn