GENSCAN 1.0	Date run:  4-Nov-116	Time: 05:43:34

Sequence gi568815595r:47462603_47677929 : 215327 bp : 45.03% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    569    564    6                               1.05
 1.02 Term -   6378   5751  628  2  1   68   49   160 0.034   3.93
 1.01 Init -  13416  13370   47  0  2   35   65   104 0.015   0.96
 1.00 Prom -  22439  22400   40                              -3.06

 2.15 PlyA -  24579  24574    6                               1.05
 2.14 Term -  33595  33467  129  1  0  115   43    96 0.985   5.98
 2.13 Intr -  35864  35684  181  1  1   76   85   172 0.712  15.57
 2.12 Intr -  39249  38992  258  2  0   81   42   230 0.703  14.28
 2.11 Intr -  41846  41728  119  2  2   83   82   100 0.053   8.16
 2.10 Intr -  51419  51068  352  1  1   58   65   143 0.006   4.33
 2.09 Intr -  79818  79723   96  2  0   46   80   108 0.210   4.92
 2.08 Intr -  80144  79842  303  1  0   55   47   117 0.091   0.01
 2.07 Intr -  87559  87355  205  2  1   45   67   295 0.759  21.36
 2.06 Intr - 100159 100048  112  1  1  122   55    92 0.036   9.25
 2.05 Intr - 104521 104450   72  1  0   78   70    37 0.553   0.50
 2.04 Intr - 106625 106550   76  1  1   81   73    78 0.700   5.12
 2.03 Intr - 110272 110084  189  0  0   74   89   414 0.393  38.80
 2.02 Intr - 115326 114231 1096  1  1  119  110  1013 0.988  95.63
 2.01 Init - 116091 115995   97  0  1  103   77   215 0.981  20.37
 2.00 Prom - 118898 118859   40                              -2.26

 3.11 PlyA - 119183 119178    6                               1.05
 3.10 Term - 128235 128051  185  1  2   98   38    75 0.012   1.21
 3.09 Intr - 147725 147464  262  2  1  109  110   203 0.989  21.66
 3.08 Intr - 159739 159605  135  1  0   43   87   120 0.267   8.16
 3.07 Intr - 160106 159966  141  2  0   88   62    27 0.158   0.65
 3.06 Intr - 172742 172588  155  0  2   29   47   138 0.900   3.59
 3.05 Intr - 173534 173420  115  2  1  108   91    90 0.927  11.32
 3.04 Intr - 176178 176123   56  1  2   68   98    77 0.643   5.40
 3.03 Intr - 198853 198692  162  2  0   30   97   175 0.369  12.55
 3.02 Intr - 199990 199732  259  1  1   95   47   159 0.346   9.54
 3.01 Intr - 212986 212873  114  1  0   58   86    85 0.533   5.94

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  47652  47543  110  1  2   83   48   131 0.912   7.27
S.002 Init -  51250  51068  183  1  0   60   65   154 0.880   8.75
S.003 Sngl -  58695  58543  153  0  0   91   44   151 0.947   5.30
S.004 Init -  89886  89736  151  0  1   71  100    26 0.854   2.30
S.005 Term - 100159  99998  162  1  0  122   42   127 0.959   9.44
S.006 Term - 167559 167416  144  0  0   84   48   110 0.921   4.51


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:47462603_47677929|GENSCAN_predicted_peptide_1|224_aa
MRTPLGARAEGGGAGGMFSLFYIETIDPGAICRKLKLDPFLTPYTKINSRWIKDLNVRPK
TIKTLEENLGNTIQAIGMGKDFMTKTPKAMATKAKIDKWDLIKLKSFYTAKETTIRLNRQ
PTEWEKIFTIYPSDKGLISRIYKELKQIYKKKIKQPYQKVGEAYEQTLLKRRHLCSQQTH
EKMLVVTGHQRNANQNHNEIPSHQLEWGSLKSQETTGAGEDVEK

>gi568815595r:47462603_47677929|GENSCAN_predicted_CDS_1|675_bp
atgcgcacgccgctgggcgcacgtgcggagggcggcggggcgggaggaatgttttcatta
ttctacatagaaactatcgatccaggagccatatgtagaaagctgaaactggatcccttc
cttacaccttatacaaaaatcaattcaagatggattaaagacttaaatgttagacctaaa
accataaaaaccctagaagaaaacctaggcaataccattcaggccataggcatgggcaag
gacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggat
ctaattaaactaaagagcttctacacagcaaaagaaactaccatcagactgaacaggcaa
cctacagagtgggagaaaatttttacaatctacccatctgacaaagggctaatatccaga
atctacaaagaacttaaacagatttacaagaaaaaaatcaaacaaccctatcaaaaagtg
ggtgaagcatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacat
gaaaaaatgcttgtcgtcactggccatcagagaaatgcaaatcaaaaccacaatgagata
ccctcacaccagttagaatggggatcattaaaaagtcaggaaacaacaggtgctggagag
gatgtggagaaatag

>gi568815595r:47462603_47677929|GENSCAN_predicted_peptide_2|1094_aa
MGRAGGGGPGRGPPPLLLFLGAALVLASGAVPAREAGSAVEAEELVKGSPAWEPPANDTR
EEAGPPAAGEDEASWTAPGGELAGPEEVLQESAAVTGTAWLEADSPGLGGVTAEAGSGDA
QALPATLQAPHEVLGQSIMPPAIPEATEASGPPSPTPGDKLSPASELPKESPLEVWLNLG
GSTPDPQGPELTYPFQGTLEPQPASDIIDIDYFEGLDGEGRGADLGSFPGSPGTSENHPD
TEGETPSWSLLDLYDDFTPFDESDFYPTTSFYDDLDEEEEEEEDDKDAVGGGDLEDENEL
LVPTGKPGLGPGTGQPTSRWHAVPPQHTLGSVPGSSIALRPRPGEPGRDLASSENGTECR
SGFVRHNGSCRSVCDLFPSYCHNGGQCYLVENIGAFCRCNTQDYIWHKGMRCESIITDFQ
VMCVAVGSAALVLLLLFMMTVFFAKKLYLLKTENTKLRRTNKFRTPSELHNDNFSLSTIA
EGSHPNLQTPFFFSEGEKKELLLEGLATQPDDPSAPHKIQEVLKSCLKEEESFNIQNSMS
PKLEGGKEQDPDDEEEEGEGKEKEKEKKKKKKKKKEKEKEKEKEKEKEKEKEKEKEKGRR
RRRRRRRRRRRRRRRRRTARFLVRPALWPARAEVHPCSTDGETETLGQTGSMSKATTRLP
GVTTRKPSAMALLLTLLATGMSSHRKKDLPLAPLASQALPNARHRTLASGIHRELSIDPA
NLQKSGGEHDQQEHTAGPSDTERDKLVTSPSSQECGAYRRRLTATCGEKEPGAGQRARPR
EEEYSVAWSLGGPLGGLGRHADLRGMSRQRPLAVAQRSPSFPTTWDSTDVYARAQRSHRG
TRLIGCGWLAKVALRMRASLREPGCRGVSLTMARERGQLVFLEGLKSAVDVVFQAQKEPH
PLQFLREANAGNLKPLFEFVREALKPVDSGEARWTYPVLLVDDLSVLLSLGMGAVAVLDF
IHYCRATVCWELKVLMELPSLRPPVTSKNSDSKEQASILYLMQGNMVVLVHDSGDAEDEE
NDILLNGLSHQSHLILRAEGLATGFCRDVHGQLRILWRRPSQPAVHRDQSFTYQYKIQDK
SVSFFAKGMSPAVL

>gi568815595r:47462603_47677929|GENSCAN_predicted_CDS_2|3285_bp
atggggcgagccgggggcgggggcccgggccgggggccgccgccactgctgctgtttctg
ggggccgcgctggtcctggcctctggggccgtgccggcgcgtgaggcgggcagcgcggtt
gaggccgaagagctggtgaagggcagcccggcgtgggagccgcctgccaacgacacgcgg
gaagaagccggcccaccagcggctggggaagatgaggcgtcgtggacggcgcccggtggc
gagctggccgggccagaagaggtgctgcaggagtcggctgcggtgaccggcaccgcctgg
ctggaagctgacagcccaggcctgggaggagtgaccgcagaggcgggcagcggcgatgcc
caggcccttccagctacgctccaggctccccacgaggtcctcgggcagtcaatcatgccc
cctgccattcctgaggctacagaggccagcgggccaccctcccccacccccggcgacaag
ctgagcccagcttctgaactccccaaggagagccccttggaggtttggctgaacctgggg
ggcagcacacccgaccctcaagggccagagctgacttacccatttcagggcaccctggag
ccccaaccggcatcagatatcattgacatcgactacttcgaaggactggatggtgagggt
cgtggcgcagatctggggagcttcccagggtcaccaggaacctcagagaaccaccctgat
actgagggagagaccccttcctggagcctgcttgacttatacgatgatttcacccccttc
gatgaatctgatttctaccccaccacatccttttatgatgacttggatgaagaggaggag
gaagaggaggatgacaaagatgcagtaggaggtggagacctagaagatgaaaatgagctt
ctagtgcccactgggaagcctggtctggggcccgggacaggccagcccaccagtcggtgg
catgctgtccctccacagcacactctggggtcggtccccggcagcagcatcgccctcagg
ccccgcccaggagagccaggcagggacttggcctccagtgaaaatggcactgagtgccgc
agtggctttgtgcggcataacggctcctgccggtcagtgtgcgacctcttcccaagttac
tgtcacaatggcggccagtgctacctggtggagaacataggggccttctgcaggtgcaac
acgcaggactacatctggcacaaggggatgcgctgcgagtccatcatcaccgacttccag
gtgatgtgcgtggccgtgggctcggctgccctcgtcctgctcctgctcttcatgatgacg
gtgttctttgccaagaagctctacctgctcaagacggagaataccaagctgcgtaggacc
aacaaattccggaccccatctgagctccacaatgataacttctccctctccaccattgcc
gagggctctcacccaaatcttcagacacctttcttcttctcagagggggaaaagaaagag
ctcctcttggagggcttggctacacagccggatgatcctagtgctccccacaaaatccag
gaggttctcaagtcctgcctgaaagaggaggagtcatttaacatccagaactccatgtcg
cccaaacttgagggtggcaaagagcaagacccggatgatgaagaagaagaaggagaaggg
aaggagaaggagaaggagaagaagaagaagaagaagaagaagaaggagaaggagaaggag
aaggagaaggagaaggagaaggagaaggagaaggagaaggagaaggagaagggaaggaga
aggagaaggaggagaaggagaaggagaaggagaaggagaaggagaaggaggacagcacgc
ttcctggtccggccggctctatggccagccagggcagaagttcacccttgttctacagat
ggagaaacagaaaccctggggcagaccgggtccatgtccaaggccacgacaaggttgcca
ggagtaaccaccagaaagccaagtgccatggctttgctcctcactctgctggcaactgga
atgagttcccacaggaaaaaagacctccctttggctcccctggcttcccaggccctgcca
aatgccagacaccggactctagcttctggcattcatagagaactatccatagaccctgcc
aacctgcaaaaaagtggaggagagcatgaccagcaggagcacactgcaggcccctctgac
acggagcgggacaagctggtaaccagcccaagctcccaggagtgtggggcatacagaagg
cgcttgacagccacgtgtggagaaaaggagcccggggctgggcagagagcgaggccaagg
gaagaagaatactcggtcgcgtggagccttgggggcccactgggagggctcgggcgccac
gcagatctgcgcggaatgagccgccagaggccgctggcagtcgcacagagaagcccatcg
tttcctaccacctgggactcgacggacgtctacgcgcgtgcgcagcggtcccatcgaggc
acccgcctcattggctgtggctggctcgcaaaagtggcattgcgcatgcgcgcttccttg
cgcgagccgggctgtcggggtgtcagcctgaccatggcgcgggagcgtgggcagcttgtg
ttccttgagggactcaagtctgcagtggacgtcgtcttccaggctcaaaaggagccacac
cccctgcagtttctcagggaggctaatgctgggaacttgaaaccattgtttgagtttgta
cgggaggccctgaagccagtagacagtggagaggctcggtggacgtacccggtgctgttg
gtggacgacctcagtgtgctcctgagcctgggcatgggggcggtggctgtgctagacttc
attcactactgcagagccaccgtgtgctgggaactaaaggtactcatggaactgccttct
ctgcgcccacctgtgacctccaagaactcagacagtaaggagcaggcttccatcttgtat
ctgatgcagggaaacatggtggtccttgtgcacgacagtggagatgcggaggatgaggag
aatgacatcctgctgaatggcctcagtcatcagagccatctgatactgcgggctgagggc
ctggccactggcttctgcagggatgtgcacgggcagctgaggatcctgtggaggagacca
tcgcagcccgcagtccaccgggatcagagcttcacttaccagtataagatacaggacaaa
agcgtgtccttttttgccaaaggaatgtctcctgctgttctgtga

>gi568815595r:47462603_47677929|GENSCAN_predicted_peptide_3|527_aa
VPAAQQMLNFPEKNKEKPVDLQNFGLRTDIYSKKTLAKALEMYKDDWNKVSEHVGSRTQD
ECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAA
KAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEG
AEEEKMEADPDGQQPEKAENKVENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKET
EENKELTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKKSFREERIVRGQT
ECQDGVVGGKVPPVLIFGPSGSWFALSFLIALLKHLAAVEERKIKSLVALLVETQMKKLE
IKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQHGQNPQ
QAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQH
MPGRMIPTVAANIHPSGSGPTPPGMPPMPGNILGPRVPLTAPNGMCK

>gi568815595r:47462603_47677929|GENSCAN_predicted_CDS_3|1584_bp
gttcctgctgctcaacagatgctaaattttcctgagaaaaacaaggaaaaaccagttgat
ttgcagaactttggtctccgtactgacatttactccaagaaaacattagcaaaggccctg
gagatgtacaaggatgattggaacaaagtgtcggaacatgttggaagtcgtactcaggat
gaatgcatcctccactttttgagacttcccattgaggacccataccttgagaattcagat
gcttcccttgggcctttggcctaccagcctgtccccttcagtcagtcaggaaatccagtt
atgagtactgttgcttttttggcatctgtggtggaccctcgcgtggcatctgctgcagca
aaagcggctttggaggagttttctcgggtccgggaggaggtaccactggaattggttgaa
gctcatgtcaagaaagtacaagaagcagcacgagcctctgggaaagtggatcccacctac
ggtctggagagcagctgcattgcaggcacagggcccgatgagccagagaagcttgaagga
gctgaagaggaaaaaatggaagccgaccctgatggtcagcagcctgaaaaggcagaaaat
aaagtggaaaatgaaacggatgaaggtgataaagcacaagatggagaaaatgaaaaaaat
agtgaaaaggaacaggatagtgaagtgagtgaggataccaaatcagaagaaaaggagact
gaagagaacaaagaactcactgatacatgtaaagaaagagaaagtgatactgggaagaag
aaagtagaacatgaaatttccgaaggaaatgttgccacagccgcagcagctgctcttgcc
tcagcggctaccaaagccaagaaaagttttagggaggaaaggatagtgaggggacagacc
gagtgccaggatggggtggtaggtggcaaagtacctcctgtcctcatctttggcccatca
gggtcctggtttgccctctccttcttgatagcccttttgaagcacctggctgcagtggaa
gaaagaaagatcaagtccctggtagctctcttggttgagacacaaatgaagaaactagag
atcaaacttcgacattttgaagagctggaaactatcatggacagagagaaagaagctcta
gaacaacagaggcagcagttgcttactgaacgccaaaacttccacatggaacagctgaag
tatgctgaattacgagcacgacagcaaatggaacagcagcagcatggccagaaccctcaa
caggcacaccagcactcaggaggacctggcctggccccacttggagcagcagggcaccct
ggcatgatgcctcatcaacagccccctccctaccctctgatgcaccaccagatgccacca
cctcatccaccccagccaggtcagataccaggcccaggttccatgatgcccgggcagcac
atgccaggccgcatgattcccactgttgcagccaacatccacccctctgggagtggccct
acccctcctggcatgccaccaatgccaggaaacatcttaggaccccgggtacccctgaca
gcacctaacggcatgtgtaagtaa