GENSCAN 1.0	Date run:  4-Nov-116	Time: 05:34:42

Sequence gi568815595f:136754461_136955696 : 201236 bp : 41.16% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9154   9286  133  0  1   68   55    68 0.105   1.85
 1.02 Intr +  17719  17935  217  2  1   62   72   123 0.354   4.74
 1.03 Intr +  25694  25847  154  2  1   10   98   155 0.270   7.85
 1.04 Intr +  33896  34002  107  1  2   77   31    97 0.164   0.99
 1.05 Intr +  35479  35550   72  1  0  106   84    10 0.213   0.00
 1.06 Intr +  37890  38002  113  0  2   73   71    69 0.301   2.80
 1.07 Term +  51390  51628  239  1  2   44   49   177 0.552   4.75
 1.08 PlyA +  53222  53227    6                               1.05

 2.08 PlyA -  54144  54139    6                               1.05
 2.07 Term -  54574  54470  105  1  0   86   49    79 0.152   1.23
 2.06 Intr -  63868  63738  131  2  2   69   30    74 0.039  -0.81
 2.05 Intr -  64808  64511  298  2  1   34   59   378 0.527  25.02
 2.04 Intr -  65176  65034  143  2  2   29  -61   160 0.245  -5.65
 2.03 Intr -  65736  65624  113  2  2   57   62    83 0.712   1.70
 2.02 Intr -  66087  65922  166  1  1   97   56   101 0.606   5.90
 2.01 Init -  68641  68566   76  1  1   70   77    29 0.721   1.30
 2.00 Prom -  73138  73099   40                              -5.55

 3.00 Prom +  83227  83266   40                              -4.85
 3.01 Sngl + 100001 101239 1239  1  0   70   42   537 0.688  42.86
 3.02 PlyA + 102173 102178    6                               1.05

 4.02 PlyA - 102197 102192    6                               1.05
 4.01 Sngl - 108378 107965  414  0  0   69   42   292 0.777  16.75
 4.00 Prom - 110483 110444   40                              -6.75

 5.00 Prom + 117190 117229   40                              -6.65
 5.01 Sngl + 118373 118873  501  1  0   30   44   282 0.807  13.79
 5.02 PlyA + 119678 119683    6                               1.05

 6.00 Prom + 121148 121187   40                              -6.15
 6.01 Sngl + 121241 121981  741  1  0   44   42   253 0.965  12.25
 6.02 PlyA + 121986 121991    6                               1.05

 7.02 PlyA - 122202 122197    6                               1.05
 7.01 Sngl - 135653 135423  231  2  0   97   36   157 0.537   4.92
 7.00 Prom - 138675 138636   40                              -4.65

 8.02 PlyA - 139658 139653    6                               1.05
 8.01 Sngl - 145616 144972  645  2  0  103   42   528 0.799  45.62
 8.00 Prom - 159633 159594   40                              -4.35

 9.00 Prom + 165209 165248   40                              -7.15
 9.01 Init + 173542 173767  226  0  1   71   82   322 0.999  28.58
 9.02 Intr + 191123 191835  713  0  2   73  123   622 0.969  54.43
 9.03 Term + 193799 193993  195  1  0  104   43   126 0.996   6.13
 9.04 PlyA + 194641 194646    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 112889 112575  315  2  0   65   50   164 0.944   6.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:136754461_136955696|GENSCAN_predicted_peptide_1|344_aa
MHHVPGKAADTQRHPVKAARREAVPCKATGAELPKTMGTHLLHQALWEANKAEELSPKSE
LYKVGGTGPQKECNFTREYSKTPTEFQAMAINLGPLCSLCPGIAGKKKSHHSGIRERAGG
NLFEEAPEPVPTGRMVHRCTGASTDDCSYGSRAMAGQLSSQEPSYSGTVCIILSTMWSSD
RPMRGAQGGQCQQTQKQHQLQAKRQLDVLPLQSKVKVFLTLLTSPGPSLPKDFLQVQLEA
PMRVTMLKANGTNRASSTRSAPCCLVIGRESPTRLSSGLWFITGSGEVLVFLSCEQRSLW
VQKPLIVILERQGEKPAKNETNNEEVELRNREKLGLDLVILGAK

>gi568815595f:136754461_136955696|GENSCAN_predicted_CDS_1|1035_bp
atgcaccatgtgcctggaaaagctgcagacactcaacgccatcctgtgaaagcagccagg
agggaggctgtaccctgcaaagccacaggggcagagctgcccaagaccatgggaacccac
ctcttgcatcaagctctttgggaggctaataaggcagaagaattgtctcccaagtctgag
ctctacaaagttggaggtacaggtccccagaaggagtgcaattttaccagagaatatagc
aagactcccactgagttccaagctatggctatcaacctgggccctttgtgttctttgtgt
ccagggatagcaggcaaaaagaagagtcaccattctggcatcagggaaagagcaggaggc
aacttatttgaggaagcaccagagccagtgcccacaggaagaatggtccacaggtgcact
ggggccagcacagatgactgcagctatgggtcacgagcaatggcaggacaactcagcagt
caagaacccagctacagtggaacagtatgtatcatactcagcacaatgtggagctcagac
aggcccatgcgaggagcccaagggggtcagtgccagcagactcagaaacagcaccagctc
caggctaagaggcagttggatgtgctccctctgcagtcaaaggtcaaagtttttcttacc
ttactcacctctccagggcccagcctcccaaaggacttcttacaagttcagttagaggca
cccatgagagtaaccatgctcaaagctaatggtacaaacagagcctcctcaacaagatct
gccccttgctgcctggtgattggaagagaaagtccaaccagactcagctctggactttgg
ttcatcactgggagtggagaagtgctcgtcttcctttcatgtgaacaaagaagcctgtgg
gtccagaaacctttgatagtcatcttggaacgacagggagagaagcctgccaagaatgaa
accaacaatgaagaagtagaattgagaaacagagagaaacttggtcttgatctcgtcatt
ttaggagctaaatga

>gi568815595f:136754461_136955696|GENSCAN_predicted_peptide_2|343_aa
MAFIQKPGNNKSWQGCGERELSHIVGNKICYAYAYLYLQGKPHLLSGYVQETSLNLSEKS
FSVGPAPLWPPAMEMGYFWQSTLDVGGYYLQVLDQHSDPSFPPRSSRSRVKENLARDAVT
HPLLGLATGREESNSPWPSSWTLQEGPDTRQRKETGNRAVADAGPPAGSRSQSAAADRLP
GPGYLRVVARKVPRRRLTRACPRLGKSRRALPGVLRRERGAAARTLRLRSPPSAAPTPQP
DWRRSWRLRGTLRVVPELKDFLYPRAGHPVSSGYVLHLKAITPILWPSPAVFSRFWLPLT
TLAPSGLEWKNDCRITFMAWNAKDVAVSYYFYQLAKMHPEPGT

>gi568815595f:136754461_136955696|GENSCAN_predicted_CDS_2|1032_bp
atggcttttatccaaaagccaggcaataacaaaagctggcaaggatgtggagaaagggaa
ctctcacacattgttggtaataaaatctgttatgcatatgcttatctgtacctccaaggc
aagccacatttgctttcgggttatgttcaggaaaccagcctcaacttgtctgaaaagagt
ttcagtgttgggcctgctccactctggccaccagccatggagatgggctatttttggcaa
agcactctggacgtggggggttactatctccaggtcctcgatcaacactcggacccgagc
tttccgcctcgctcctcgcggagccgggtgaaagaaaacctggcccgagatgcagtgact
caccccttgcttgggttggctactgggcgagaggaaagcaacagcccctggccttcatca
tggacgctgcaggagggcccagacacgcgacagcggaaagaaacgggaaaccgggccgta
gccgatgctggccctcccgcaggatcaaggtcccagtccgccgccgccgaccggctcccg
gggcccggttacctgcgtgtcgtggcgaggaaggtgccccggaggcgactgacgcgggcg
tgccctcgcctgggaaaatcgaggcgggcgctgcccggagtactgcggagggagaggggc
gccgccgcgcggactctgcgcctgcgctctccgccctccgccgcccccaccccacaacct
gactggcgccggagttggagactgcgggggacgctcagggttgtgcctgaactgaaggac
ttcctctacccgcgagcgggccaccctgttagcagtggctatgttcttcatctgaaagcc
attactcccatcctgtggccctctcctgcagttttctccaggttctggttaccactaact
acccttgccccttcaggcctggagtggaagaatgactgcaggataaccttcatggcatgg
aatgccaaagatgtggctgtgtcttattatttctaccagttggcaaaaatgcacccagag
cctggaacctag

>gi568815595f:136754461_136955696|GENSCAN_predicted_peptide_3|412_aa
MDTSPSRKYPVKKRVKIHPNTVMVKYTSHYPQPGDDGYEEINEGYGNFMEENPKKGLLSE
MKKKGRAFFGTMDTLPPPTEDPMINEIGQFQSFAEKNIFQSRKMWIVLFGSALAHGCVAL
ITRLVSDRSKVPSLELIFIRSVFQVLSVLVVCYYQEAPFGPSGYRLRLFFYGVCNVISIT
CAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMATVVCSILGVCLVMIPN
IVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRSIKEKISMWTALFTFGWTGTIWGI
STMFILQEPIIPLDGETWSYLIAICVCSTAAFLGVYYALDKFHPALVSTVQHLEIVVAMV
LQLLVLHIFPSIYDVFGGVIIMISVFVLAGYKLYWRNLRKQDYQEILDSPIK

>gi568815595f:136754461_136955696|GENSCAN_predicted_CDS_3|1239_bp
atggatacttctccctccagaaaatatccagttaaaaaacgggtgaaaatacatcccaac
acagtgatggtgaaatatacttctcattatccccagcctggcgatgatggatatgaagaa
atcaatgaaggctatggaaattttatggaggaaaatccaaagaaaggtctgctgagtgaa
atgaaaaaaaaagggagagctttctttggaaccatggataccctacctccaccaacagaa
gacccaatgatcaatgagattggacaattccagagctttgcagaaaaaaacatttttcaa
tcccgaaaaatgtggatagtgctgtttggatctgctttggctcatggatgtgtagctctt
atcactaggcttgtttctgatcggtctaaagttccatctctagaactgatttttatccgt
tctgtttttcaggtcttatctgtgttagttgtgtgttactatcaggaggccccctttgga
cccagtggatacagattacgactcttcttttatggtgtatgcaatgtcatttctatcact
tgtgcttatacatcattttcaatagttcctcccagcaatgggaccactatgtggagagcc
acaactacagtcttcagtgccattttggcttttttactcgtagatgagaaaatggcttat
gttgacatggctacagttgtttgcagcatcttaggtgtttgtcttgtcatgatcccaaac
attgttgatgaagacaattctttgttaaatgcctggaaagaagcctttgggtacaccatg
actgtgatggctggactgaccactgctctctcaatgatagtatacagatccatcaaggag
aagatcagcatgtggactgcactgtttacttttggttggactgggacaatttggggaata
tctactatgtttattcttcaagaacccatcatcccattagatggagaaacctggagttat
ctcattgctatatgtgtctgttctactgcagcattcttaggagtttattatgccttggac
aaattccatccagctttggttagcacagtacaacatttggagattgtggtagctatggtc
ttgcagcttctcgtgctgcacatatttcctagcatctatgatgtttttggaggggtaatc
attatgattagtgtttttgtccttgctggctataaactttactggaggaatttaagaaag
caggactaccaggaaatactagactctcccattaaatga

>gi568815595f:136754461_136955696|GENSCAN_predicted_peptide_4|137_aa
MSTRSTAQADASPPLGLEVRAPFLLPRPYLPGLGLRHSWQKDFFMRKQTSQPARRTLDLP
GSHGRPPGLSARHSAPGADKEAAGSRSLGQRPEGLAESRCRSLDPPSSLRAPSGSAPSLQ
TAPPGLTQREKRKRRSE

>gi568815595f:136754461_136955696|GENSCAN_predicted_CDS_4|414_bp
atgtccacccgcagcaccgcgcaggctgacgcctcccctcctctcgggctggaggtgaga
gcgcccttcctcctaccacgtccctaccttcccggcctcggattacgccacagctggcaa
aaggactttttcatgagaaaacagacaagtcaaccagcgcgccgcacactcgacctccca
ggctcgcacgggcggccgcccgggctctcagcccgacacagcgctccaggggctgacaag
gaggccgcggggtcacgctccctggggcaacggcccgagggtctcgcggaatcccggtgc
agaagtctggaccctccgagcagcctccgcgccccctccggctcggctccgagcctgcag
acggcgcccccggggctaactcagcgcgagaagaggaagcgacgcagcgagtaa

>gi568815595f:136754461_136955696|GENSCAN_predicted_peptide_5|166_aa
MLQCGVDAASAQKSRIGVWEPPPAFQKMYGNAWMPRQKFAAGVEHSWRTSARAVQKGNVG
SEPPHRVPTRVPPSGAVRRGPPSSSLQNDRSTDSLHHAPGKAADTQCKPVKAARREAVLC
KTTESEVPKTMEIHFLDQHDLDVRHGVKGDHFGALRFDCPAVFWIC

>gi568815595f:136754461_136955696|GENSCAN_predicted_CDS_5|501_bp
atgctgcaatgtggtgttgatgctgcaagtgcacagaagtcaagaattggggtttgggaa
cctccacctgcatttcagaagatgtatggaaatgcttggatgcccaggcagaagtttgca
gcaggggtagagcattcgtggagaacctctgctagggcagtgcagaagggaaatgtgggg
tcagagcccccacacagagttcctactcgggtaccgcctagtggagctgtgagaagaggg
ccaccatcctccagcctccagaatgatagatccactgacagcttgcaccatgcgcctgga
aaagctgcagacactcaatgcaagcctgtgaaagcagccaggagagaggctgtactctgc
aaaaccacagagtcagaggtgcccaagaccatggaaatccacttcttggatcagcatgac
ctggatgtgagacatggagtcaaaggagatcattttggagctttaagatttgactgccct
gctgtattttggatttgctag

>gi568815595f:136754461_136955696|GENSCAN_predicted_peptide_6|246_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSALHQVDLIDIYRTLHPKSTEYTFFSAPHHTYS
KIDHIVGSKALLSKYKRTEIITNYLSGHSAIKLELRIKNLTQNRSTTWKLNNLLLNDYWV
HNEMKAEVKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAQKRKQERSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIK
KKRRIK

>gi568815595f:136754461_136955696|GENSCAN_predicted_CDS_6|741_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagtcaac
aaggatacccaggaattgaactcagctctgcaccaagtggacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatagttggaagtaaagctctcctcagcaaatataaaagaacagaaatt
ataacaaactatctctcaggccacagtgcaatcaaactagaactcaggattaagaatctc
actcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaagtaaagatgttctttgaaaccaacgagaacaaagacaca
acataccagaatctctgggacgcattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccaaaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaa
atcagagcagaactgaaagaaatagagacacaaaaaacccttcaaaaaatcaatgaatcc
aggagctggttttttgaaaggatcaacaaaattgatagaccgctagcaagactaataaag
aaaaagagaagaatcaaatag

>gi568815595f:136754461_136955696|GENSCAN_predicted_peptide_7|76_aa
MPEPPRPMGCCAARASPTRTTLCSRAPNPIDHPRAQECGHTAQDWQAAPPATPVRDPLGE
ASWAPESGGALENLYV

>gi568815595f:136754461_136955696|GENSCAN_predicted_CDS_7|231_bp
atgcctgagcctccccgccccatgggctgctgtgccgcccgagcctccccaacaaggacc
accctctgctccagggcgcccaatcccattgaccacccaagggctcaggagtgcgggcac
acagcgcaggactggcaggcagctccacctgcaacccctgtgcgggatccactgggtgaa
gccagctgggctcctgagtctggtggggccttggagaatctttatgtctag

>gi568815595f:136754461_136955696|GENSCAN_predicted_peptide_8|214_aa
MVQPVRCKKPINYSQFGDSDSDDDFVSATVPLNKQSRTSKELKQDKPKPNLNNLQKEEIP
LEEKTPKKKRMALDDKLYQRDLEVALALSVKELSTVTTNVQKSQDKRVEKHGNSRTETVS
KSPRISNCSVASDYLDLDKITKKDNGGIQGKRKAASKAAVQQRKIFLEGSDGNSANNTKP
DLATGEDSEDDSDFGESEDNDKDSSMRKSKVKEI

>gi568815595f:136754461_136955696|GENSCAN_predicted_CDS_8|645_bp
atggtgcagcctgtgagatgtaagaaaccaatcaattactcacagtttggcgactctgac
agtgatgatgattttgtttctgcaactgtacctttaaacaagcaatccagaacatcaaag
gagttaaaacaagataaaccaaaacctaatttgaacaatctccagaaagaagaaatccca
ctagaagagaaaacccctaaaaaaaaaaggatggctttagatgataagctctaccagaga
gacttagaagttgcactagctttatcagtgaaggaactttcaacagtcaccactaatgtg
cagaagtctcaagataaaagagttgaaaaacatggcaatagtagaacagaaacagtgagt
aagtctcctcgtatctctaattgcagtgtagccagtgattatttagatttggataagatt
actaagaaagacaatggtggtattcaagggaaaagaaaagcagcatctaaagctgcggta
caacagaggaaaatttttctggaaggcagtgatggcaatagtgctaataacaccaaacca
gacttggcaactggtgaagattctgaggatgattctgattttggtgagagtgaggataat
gacaaagactcctctatgagaaaaagtaaagttaaagaaatttaa

>gi568815595f:136754461_136955696|GENSCAN_predicted_peptide_9|377_aa
MAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKSWWRVRNSMNKTGFVPSNYVERKN
SARKASIVKNLKDTLGIGKVKRKPSVPDSASPADDSFVDPGERLYDLNMPAYVKFNYMAE
REDELSLIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYVTEEGDSPLGDHVGSLSEKLA
AVVNNLNTGQVLHVVQALYPFSSSNDEELNFEKGDVMDVIEKPENDPEWWKCRKINGMVG
LVPKNYVTVMQNNPLTSGLEPSPPQCDYIRPSLTGKFAGNPWYYGKVTRHQAEMALNERG
HEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCIGQRKFSTMEELVEHYKKAP
IFTSEQGEKLYLVKHLS

>gi568815595f:136754461_136955696|GENSCAN_predicted_CDS_9|1134_bp
atggcagaagaagtggtggtagtagccaaatttgattatgtggcccaacaagaacaagag
ttggacatcaagaagaatgagagattatggcttctggatgattctaagtcctggtggcga
gttcgaaattccatgaataaaacaggttttgtgccttctaactatgtggaaaggaaaaac
agtgctcggaaagcatctattgtgaaaaacctaaaggataccttaggcattggaaaagtg
aaaagaaaacctagtgtgccagattctgcatctcctgctgatgatagttttgttgaccca
ggggaacgtctctatgacctcaacatgcccgcttatgtgaaatttaactacatggctgag
agagaggatgaattatcattgataaaggggacaaaggtgatcgtcatggagaaatgcagt
gatgggtggtggcgtggtagctacaatggacaagttggatggttcccttcaaactatgta
actgaagaaggtgacagtcctttgggtgaccatgtgggttctctgtcagagaaattagca
gcagtcgtcaataacctaaatactgggcaagtgttgcatgtggtacaggctctttaccca
ttcagctcatctaatgatgaagaacttaatttcgagaaaggagatgtaatggatgttatt
gaaaaacctgaaaatgacccagagtggtggaaatgcaggaagatcaatggtatggttggt
ctagtaccaaaaaactatgttaccgttatgcagaataatccattaacttcaggtttggaa
ccatcacctccacagtgtgattacattaggccttcactcactggaaagtttgctggcaat
ccttggtattatggcaaagtcaccaggcatcaagcagaaatggcattaaatgaaagagga
catgaaggggatttcctcattcgtgatagtgaatcttcgccaaatgatttctcagtatca
ctaaaagcacaagggaaaaacaagcattttaaagtccaactaaaagagactgtctactgc
attgggcagcgtaaattcagcaccatggaagaacttgtagaacattacaaaaaggcacca
atttttacaagtgaacaaggagaaaaattatatcttgtcaagcatttatcatga