GENSCAN 1.0	Date run:  4-Nov-116	Time: 05:22:29

Sequence gi568815575f:116072281_116273369 : 201089 bp : 36.46% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    380    375    6                               1.05
 1.01 Sngl -  20125  19763  363  1  0   87   55   145 0.800   7.17
 1.00 Prom -  20450  20411   40                              -3.85

 2.03 PlyA -  20665  20660    6                               1.05
 2.02 Term -  36137  35602  536  0  2   29   43   508 0.955  33.82
 2.01 Init -  36498  36219  280  0  1   61  -46   470 0.994  28.12
 2.00 Prom -  40283  40244   40                              -1.55

 3.00 Prom +  40521  40560   40                              -2.35
 3.01 Init +  44386  44527  142  0  1   62   48   139 0.142   7.64
 3.02 Intr +  49638  49928  291  1  0    6   71   158 0.082   2.08
 3.03 Intr +  52244  52491  248  0  2   49   41   195 0.013   7.16
 3.04 Term +  69196  69678  483  0  0   15   43   247 0.758   6.66
 3.05 PlyA +  71562  71567    6                               1.05

 4.00 Prom +  71672  71711   40                              -6.75
 4.01 Sngl +  87953  88969 1017  1  0   88   43   695 0.985  61.77
 4.02 PlyA +  89197  89202    6                               1.05

 5.00 Prom +  89366  89405   40                              -5.95
 5.01 Sngl +  89459  90112  654  1  0   49   39   194 0.529   6.52
 5.02 PlyA +  90173  90178    6                               1.05

 6.04 PlyA -  92626  92621    6                               1.05
 6.03 Term - 101017 100712  306  1  0   13   42   413 0.060  23.33
 6.02 Intr - 107826 107627  200  1  2   91   49   137 0.276   8.25
 6.01 Init - 107983 107887   97  1  1   68   54    55 0.541   0.71
 6.00 Prom - 114573 114534   40                              -3.75

 7.07 PlyA - 114640 114635    6                               1.05
 7.06 Term - 130970 130866  105  2  0   75   45    78 0.335  -0.37
 7.05 Intr - 132874 132794   81  1  0   78   91    54 0.599   3.62
 7.04 Intr - 143672 143499  174  2  0   32   76   152 0.694   7.61
 7.03 Intr - 144938 144788  151  1  1   57   72    58 0.264   0.34
 7.02 Intr - 160740 160652   89  0  2  122   32   110 0.215   6.65
 7.01 Init - 161570 161493   78  2  0   70   59    65 0.818   2.91
 7.00 Prom - 162012 161973   40                              -1.35

 8.00 Prom + 165161 165200   40                              -6.35
 8.01 Init + 167231 167289   59  1  2   81   81    -9 0.435  -1.47
 8.02 Intr + 167999 168124  126  2  0   56  103   112 0.605   8.37
 8.03 Intr + 172738 172848  111  1  0   43   77   115 0.254   4.48
 8.04 Intr + 173291 173527  237  2  0   36   44   142 0.217   0.41
 8.05 Intr + 174098 174225  128  2  2   66   50   136 0.786   7.00
 8.06 Intr + 174469 174647  179  2  2   10   92    78 0.286  -0.88
 8.07 Intr + 178138 178294  157  0  1   47   49   149 0.353   5.56
 8.08 Term + 182413 182915  503  2  2   44   32   289 0.322  12.56
 8.09 PlyA + 182933 182938    6                               1.05

 9.00 Prom + 184109 184148   40                              -5.65
 9.01 Sngl + 184163 184606  444  1  0   71   49   208 0.864  11.19
 9.02 PlyA + 185508 185513    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  49947  50123  177  2  0   88   46   184 0.806   8.90


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:116072281_116273369|GENSCAN_predicted_peptide_1|120_aa
MRDSAIRLGYYAFPMAFAICRSDPLVCLHHQDPGFQAQNQVAVWADTKLVAGVFFSYPSG
TWNPSKTEPFTSLEKGLKPGSQVVLLSGSHSLEAQQAKNHWIEIQQAQQSEVNLGRLSLV

>gi568815575f:116072281_116273369|GENSCAN_predicted_CDS_1|363_bp
atgagggactctgctatcaggctgggttactatgcttttcctatggcttttgcaatctgc
agatcagatcctcttgtgtgcctacaccaccaggaccctgggtttcaagcacaaaaccag
gtggctgtttgggcagacaccaagctagtggcaggagtatttttttcataccccagtggc
acctggaaccccagcaagacagaaccattcacttccctggaaaaagggctgaagccaggg
agccaagtggtcttgctcagcgggtcccactcccttgaagcccagcaagctaagaaccac
tggattgaaattcagcaagcacagcagtctgaggtcaacctgggacgattgagcttggtg
tga

>gi568815575f:116072281_116273369|GENSCAN_predicted_peptide_2|271_aa
MKEERSKKEEEEEEEEEEKEEGEGEEEGEEEGGGGGRRRKRRRRRRRRRRRRRRRRKKKE
EERRREKKKEEEDYRPTSLMNLDAKILKKIPANQELYRNYGILADAMEQVVQHKNAYEVI
PGGVKGGTKEKRLVAQFIPKFFKQFPELVESAINALLDLCEDEDVSIRRQAIKELPQFAT
GENLPRVADILMQLLQTNNSAEFNLVNNALLSIFKMVAKGTLGGLFSQILRGEDIVRERA
IKFLSTKLKTLPDEVLTKEVKELILTESKMS

>gi568815575f:116072281_116273369|GENSCAN_predicted_CDS_2|816_bp
atgaaagaagaaagaagcaagaaggaagaggaggaggaggaggaagaagaagaaaaagaa
gaaggagaaggagaagaagaaggagaagaagaaggaggaggaggaggaagaagaagaaaa
agaagaaggagaaggagaagaagaaggagaagaagaaggaggaggaggaagaagaaggaa
gaagaaagaagaagagagaagaaaaaagaagaagaagactacagaccaacatccctgatg
aatttggatgcaaaaattcttaagaaaataccagctaaccaggagctttaccgcaattat
ggcatcctggccgatgccatggagcaagtggtccagcataaaaatgcctatgaagtgata
ccgggtggtgtgaaaggtggtactaaggaaaaacgattagtagcccaatttattccgaaa
ttctttaagcagtttccagaattggttgagtctgctatcaatgcactgttagacctctgt
gaggatgaagatgtatctattcgacgtcaagcaattaaagaactgcctcaatttgccact
ggagaaaatcttcctcgagtggcagatatattaatgcaacttttgcagacaaataactct
gcagaatttaacctagtgaacaacgccctgttaagtatatttaaaatggttgcaaaaggg
actttaggtgggttgttcagccaaatacttcgaggagaggacattgttagagaacgagca
attaaattcctttctacaaaacttaagactttaccagatgaagtcttaacaaaggaagtg
aaagagcttatactaactgaatccaaaatgtcctag

>gi568815575f:116072281_116273369|GENSCAN_predicted_peptide_3|387_aa
MINITNDQGNANQNHNVIPPNSCKNVHNQKTVDVGMDPVIMEHFYTAALEAPHSRGRLTP
HTARYSSETKLPEEQSGSNICCSTTSAILQPLLLIPRQKRSGVDLQQTPKDLQLRVLTVR
RKTNKQKGHPHQKPICTSPSSKTKEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPSL
NQEEAESLKRPITGSEIEAVIHSLPTKKTPGPDGFTAELYQRYKEELRLGALCPAAPEGQ
GTAQAVASEGGSPKPWQLPHGVEPAGVQKSRIEVWEPLSRFQKMYGNDWMPRQKFAEGAG
PSWRTSARTVWKENVESEPPHRVPIGALPSGAVRREALSSRPHNGRSTGSLCHAPGKATG
SWEGGCTLQRHRGGAAQNHGNPPLASA

>gi568815575f:116072281_116273369|GENSCAN_predicted_CDS_3|1164_bp
atgatcaacattactaatgatcagggaaatgcaaatcaaaatcacaatgtgataccacct
aactcctgcaagaatgtccataatcaaaaaacagtagatgttggaatggatccagtgatc
atggaacacttctacactgctgccttagaggcaccccacagtaggggcagactaacacct
cacacggcccggtactcctctgagacaaaacttccagaggaacaatcaggcagcaacatt
tgctgttcaacaacatctgctattctgcagcctctgctgctgatacccaggcaaaaaaga
tctggagtggacctccagcaaactccaaaagacctgcagttgagggtcctgactgttaga
aggaaaactaacaaacagaaaggacatccacaccaaaaacccatctgtacgtcaccatca
tcaaagaccaaagaaatacaaactaccatcagagaatactataaacacctctacgcaaat
aaactagaaaatctggaagaaatggataaattcctcgacacatacaccctcccaagtcta
aaccaggaagaagctgaatctcttaagagaccaataacaggctctgaaattgaggcagta
attcatagcttaccaaccaaaaaaactccaggaccagatggattcacagccgaattatac
cagaggtacaaggaggagctgagacttggtgccctgtgtccagccgctccagagggccaa
ggtacagctcaggctgttgcttcagagggtggaagccccaagccttggcagcttccacat
ggtgttgagcctgcaggtgtgcagaagtcaagaattgaggtttgggaacctctgtctaga
tttcagaagatgtatggaaatgactggatgcccaggcaaaagtttgctgaaggggcgggc
ccttcctggagaacctctgctaggacagtgtggaaggaaaatgtggagtcagagccccca
cacagagtccctattggggcactgcctagtggagctgtgagaagagaggctctgtcctcc
agaccccacaatggtagatccactggcagcttgtgtcacgcacctggaaaagccacaggc
agctgggagggaggctgtaccctgcaacgccacaggggtggagctgcccaaaaccatgga
aacccacctcttgcatcagcgtga

>gi568815575f:116072281_116273369|GENSCAN_predicted_peptide_4|338_aa
MGKKQSRKTGNSKNQSASPPPKKHSSSPAMEQSWTENDFDELREEGFRRSNNSELQEEIQ
TKGKEVKNFEKNLDECVTRITNTEKCLKELMELKAKAQELREECRSLRSRCDQLEERVSV
MEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRLNLHLIGVPESDEENGTKLENTLQD
IIQENFPNLAREANIQFQEIQRTPQRYSPRRATPRQIIVRFTKVEMKEKMLRAAREKGQV
THKGKPIRLTADLLAETLQARREWKPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTHK
QMLRDFVTTRPALKELLKEALNMERNNQYQPLQNHAKL

>gi568815575f:116072281_116273369|GENSCAN_predicted_CDS_4|1017_bp
atggggaaaaaacagagcagaaaaactggaaactctaaaaatcagagtgcctctcctcct
ccaaagaaacacagttcctcaccagcaatggaacaaagctggacagagaatgactttgac
gagttgagagaagaaggcttcagacgatcaaacaactctgagctacaggaggaaattcaa
accaaaggcaaagaagttaaaaactttgaaaaaaatttagacgaatgtgtaactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaagccaaggctcaagaacta
cgtgaagaatgcagaagcctcaggagccgatgcgatcaactggaagaaagggtatcagtg
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaacgaacaaagcctccaagaaatatgggactatgtgaaaagactaaacctacatctg
attggtgtacctgaaagtgacgaggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaagggaggccaacattcagtttcaggaaata
cagagaacgccacaaagatactccccgagaagagcaactccaagacaaataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcaggtt
acccacaaagggaagcccatcagactaacagctgatctcttggcagaaactctacaagcc
agaagagagtggaagccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacacacaag
caaatgctgagagattttgtcactaccaggcctgccctaaaagagctcctgaaggaagca
ctaaacatggaaaggaacaaccagtaccagccactgcaaaatcatgccaaattgtaa

>gi568815575f:116072281_116273369|GENSCAN_predicted_peptide_5|217_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSVLHQVDLIDIYRTLHPKSTEYTFFSAPNHTYS
KIDHIVGSKALLSKCKRTEIITNCLSDHSAIKLELRIKKLTQNCSTTWKLNNLLLNDCWV
HNKMKAEIKMFFETNENKDTTYHNLWDTFKAVCRGKFIALNVHKRKQERSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKMRAELKEIETQKNPSKI

>gi568815575f:116072281_116273369|GENSCAN_predicted_CDS_5|654_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacaaaaagttaac
aaggatacccaggaattgaactcagttctgcaccaagtggacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccaaaccacacctattcc
aaaattgaccacatagttgggagtaaagctctcctcagcaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaactc
actcaaaactgctcaactacatggaaactgaataacctgctcctgaatgactgctgggta
cataacaaaatgaaggcagaaataaaaatgttctttgaaaccaacgagaacaaagacaca
acataccacaatctctgggacacattcaaagcagtatgtagagggaaatttatagcacta
aatgtccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa
gaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaa
atgagagcagaactgaaggaaatagagacacaaaaaaacccttcaaaaatttaa

>gi568815575f:116072281_116273369|GENSCAN_predicted_peptide_6|200_aa
MISFDPMSHIQVTLMQGVGSHGLVKLPTVALQGAWFKLSVDLSFWGLEDGGPLLTAPVGS
ALVGALCGGSDPTFPFHTALVEVVREGPTPTANFFLGIQPSNWNPKHTAELLLEPVSNKT
IQKRINAAVGESQEDGKRKCQVNDCYNFAAINDTHPGQSIQEGQNMEGKPANDEGQNNSS
CHLQDLVTGYPVLPIAIRLQ

>gi568815575f:116072281_116273369|GENSCAN_predicted_CDS_6|603_bp
atgatctcctttgaccccatgtctcacatccaggtcacgctgatgcaaggggtgggttcc
catggtcttgtgaagctccccactgtggctttgcagggagcatggttcaagctgtcagtg
gacttatcattctggggtctggaggacggtggccctcttctcacagctccagtaggcagt
gccctagtaggtgctctctgtgggggctctgaccccacatttcccttccacactgcccta
gtggaggttgtccgtgaaggacccacccctacagcaaacttcttcctgggcatccagcca
agtaattggaaccctaaacacactgcggagcttctgttggaaccggtttccaacaaaaca
atacagaaacggattaacgcagctgttggtgaatcccaagaggatggcaaaaggaagtgc
caggtcaatgactgctataacttcgcagctattaatgacacccatccaggccagagcatc
caggaaggtcagaacatggaagggaagccagcaaatgatgaaggccagaacaacagcagc
tgccatcttcaggacttggtcacgggttatcctgttcttcccatagctattcgtcttcag
taa

>gi568815575f:116072281_116273369|GENSCAN_predicted_peptide_7|225_aa
MAITKKSKITDAGKVVEKREHLYTVGETSFIKIVERGLTSRERLISQYPVNSLYKGDINE
AGNHHSQQTNTGTENQTPHVLTRKWEFNNENTWTHGGEHHTLWGLSHHPNTETWKRYNNS
NVKLQTDTLDEQQSKNPQQNIVIPNAAAHQKTYLLRSSRLYPLDLPLVSVSNTTVTATLL
SFVLSGTQTSKVESKDWQHSPQADRRALGILVNTSGGLAQQSVDE

>gi568815575f:116072281_116273369|GENSCAN_predicted_CDS_7|678_bp
atggctattactaaaaagtcaaaaataacagatgctggcaaggttgtggagaaaagggaa
cacttatacactgttggtgaaacatcattcatcaagattgtggagagaggacttactagt
agagagcggttgatttcccaatacccggttaactcactctacaaaggggacataaatgaa
gctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacatgtt
ctcactcgtaagtgggagtttaacaatgagaacacatggacacatggaggggaacatcac
acactctggggcctgtcgcatcatcctaataccgaaacctggaagagatacaacaacagc
aacgtaaaacttcagactgatacccttgatgagcaacaatccaaaaatcctcagcaaaat
attgtcataccaaatgcagcagcacatcaaaaaacttatctactacgatcaagtaggctt
tatcccttggatctccctctggtgtctgtatctaacactacagttactgcgacactactt
tcctttgttctaagtggaacccagacatccaaggttgagtccaaggactggcagcactca
ccacaagctgacagaagggctttggggattttagtgaataccagtggaggcctggcacaa
caatctgtggatgagtga

>gi568815575f:116072281_116273369|GENSCAN_predicted_peptide_8|499_aa
MDIAILQCTGKSVHHQKGSREKHYGTIKYYRASLELAEQELPKRVEKKEDNVSLNSFSAM
LPRKTSVSAAVLVSATIPISRVQGPLQVLGQEVFLLLHCLPIAHLPINVKPPLISPAQKE
TIKEISKGPQNPLGYRLCPLQAVGGGEFGPTRVHVPFSLSDLKQINADLGKLSDDPDRDQ
EEEAQKEKQDQRKAAALVMALRQTNLGDSERTENGAGQSLAVEGQEIDFLLDNGAAFSVL
ISCPRQLSSRSVTIRGILGQPVTRYFSHLLSCNWETFLQISSPLEDTTTAGPFFTPIQEE
VARVVIIQFPTAIGVSCLEGGLTGEANRASESETQTTIREYYKHLYANKLENLEEMDKFL
NTYTLPRLNQEEVESLNRPITGSEIESIINSLPTKKSPGPDGFTAKFYQRYKEELVPFLL
KLFQSIEKEGILPNSFYEASIILIPKTGRDTTKKENFRPISLMNIDAKILNKILANRIQQ
HIKKLIYHDQVGFIPGMQG

>gi568815575f:116072281_116273369|GENSCAN_predicted_CDS_8|1500_bp
atggatatagcaattttacagtgcacaggaaagagtgtccatcaccagaaggggtcaaga
gaaaagcattatggaacaattaaatattaccgagccagtttagaacttgctgagcaggaa
ttgcccaaaagagtggagaagaaagaagacaatgtttcactgaattcattctctgctatg
ttaccgaggaaaactagtgtttctgctgctgtgttggtgagtgcaactattccgatcagt
agggtccagggaccgttgcaggttcttgggcaagaggtgtttctgctgttgcattgcctc
cctatagctcaccttcctattaatgttaagcctcctctaatctcccctgcccagaaggaa
acaataaaagaaatctccaaaggaccacaaaaccccctgggctatcggttatgtcccctt
caagctgtagggggaggggaatttggcccaacccgggtacatgtccctttctccctctct
gatttaaagcagatcaatgcagacctgggaaagctttcagatgatcctgatagggatcaa
gaggaagaggcccaaaaggaaaagcaagatcagagaaaggctgcagcattagtcatggcc
ctcagacaaaccaaccttggtgattcagagaggacagaaaatggagcaggccaatcactt
gccgttgagggccaggaaattgacttcctcctggacaatggtgcggctttctcagtgtta
atctcctgtcccagacagctgtcctcaaggtccgttaccatccggggaatcctgggacag
cctgtaaccaggtatttctcccacctcctcagttgtaattgggagacttttctacagata
agttcccctctggaggacactacaactgcaggccccttcttcacccctatccaggaggaa
gtagctagagtggtcatcatccaattcccaacagcaattggggtgtcctgtttagagggg
ggattgacaggtgaagccaaccgggcttctgagtcagaaacacaaactaccatcagagaa
tactacaaacacctctatgcaaataaactagaaaatctagaagaaatggataaattcctc
aacacatacactctcccaagactaaaccaggaagaagttgaatctctgaatagaccaata
acaggatctgaaattgagtcaataattaacagcttaccaaccaaaaaaagtccaggacca
gatggattcacagccaaattctaccagaggtacaaggaggagctggtgccattccttctg
aaactattccaatcaatagaaaaagagggaatcctccctaactcattttatgaggccagc
atcatcctgataccaaagactggcagagacacaacaaaaaaagagaattttagaccaata
tccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcaa
cacatcaaaaagcttatctaccatgatcaagtgggcttcatccctgggatgcaaggctag

>gi568815575f:116072281_116273369|GENSCAN_predicted_peptide_9|147_aa
MGKDFMSKTPKAVATKAKIDKWDLIKLKSFCTAKETTIRVNRKPTEWEKIFAIYSSDKGL
ISRIYNELKQIYKKKTNNPINKWAKDMNRHFSKEDIYAAKRHMKKCSSSLAIREMRIKTT
MRYHLTPVRMVIIKTSGNNRCGEDVEK

>gi568815575f:116072281_116273369|GENSCAN_predicted_CDS_9|444_bp
atgggcaaggacttcatgtctaaaacacccaaagcagtggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aataggaaacctacagaatgggagaaaatttttgcaatctactcatctgacaaagggtta
atatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatc
aacaagtgggcgaaggatatgaacagacacttctcaaaagaagacatttatgcagccaaa
agacacatgaaaaaatgctcatcatcactggccatcagagaaatgcgaatcaaaaccaca
atgagataccatctcacaccagttagaatggtgatcattaaaacgtcaggaaacaacagg
tgtggagaggatgtggagaaatag