GENSCAN 1.0	Date run:  4-Nov-116	Time: 05:21:24

Sequence gi568815595f:148641036_148842112 : 201077 bp : 37.22% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9867  10107  241  2  1   46   80   182 0.918  11.28
 1.02 Intr +  29798  30000  203  0  2   70   76    62 0.070   1.28
 1.03 Intr +  40384  40459   76  0  1   50   69   101 0.160   2.57
 1.04 Term +  42034  42281  248  2  2   64   48   102 0.151  -1.23
 1.05 PlyA +  43091  43096    6                               1.05

 2.04 PlyA -  43247  43242    6                               1.05
 2.03 Term -  51557  51055  503  0  2   38   37   321 0.218  15.66
 2.02 Intr -  56713  56613  101  0  2   29   44   101 0.125  -1.37
 2.01 Init -  57118  56838  281  1  2   78   45   195 0.222   8.73
 2.00 Prom -  64913  64874   40                              -7.35

 3.00 Prom +  66749  66788   40                              -5.55
 3.01 Init +  72672  72729   58  2  1   43   74    83 0.656   3.92
 3.02 Intr +  96498  96563   66  1  0   74   78    56 0.457   1.16
 3.03 Intr +  99954 101032 1079  1  2   92   75   380 0.570  26.05
 3.04 Intr + 105949 106057  109  0  1   85   79   101 0.576   7.84
 3.05 Term + 107402 107553  152  0  2   32   42   191 0.577   5.99
 3.06 PlyA + 108844 108849    6                               1.05

 4.05 PlyA - 108965 108960    6                               1.05
 4.04 Term - 110923 110745  179  2  2   60   49   119 0.153   2.07
 4.03 Intr - 115029 114969   61  0  1   93   76    34 0.727   0.09
 4.02 Intr - 116372 116260  113  0  2   54   72   137 0.979   7.88
 4.01 Init - 119084 119030   55  2  1   59   97    16 0.977   1.10
 4.00 Prom - 123336 123297   40                              -7.95

 5.04 PlyA - 124920 124915    6                               1.05
 5.03 Term - 125581 125250  332  2  2   89   49   256 0.958  15.63
 5.02 Intr - 142422 141769  654  1  0   56   80   260 0.310  12.91
 5.01 Init - 144432 144222  211  0  1   81    0   220 0.231  11.49
 5.00 Prom - 153083 153044   40                              -4.65

 6.00 Prom + 161327 161366   40                              -3.65
 6.01 Init + 168059 168131   73  1  1   61   97    18 0.247   1.28
 6.02 Term + 169813 170048  236  2  2    6   48   235 0.722   6.80
 6.03 PlyA + 173826 173831    6                               1.05

 7.00 Prom + 182543 182582   40                              -5.35
 7.01 Init + 186789 186859   71  2  2   64  110    79 0.998   8.35
 7.02 Intr + 186967 187042   76  1  1   58  111    87 0.933   6.60
 7.03 Intr + 193463 193587  125  1  2   55  108    78 0.905   4.96
 7.04 Intr + 198540 198726  187  0  1   45   31   100 0.503  -1.23
 7.05 Intr + 199481 199750  270  1  0   42   72   207 0.770  11.32
 7.06 Intr + 200788 200889  102  0  0   83   78    32 0.313   1.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:148641036_148842112|GENSCAN_predicted_peptide_1|255_aa
MWVTHLTSYGERVGQKKKNVWALKSDAVSANALTQASAQWAKAEADLLLQVQRAQKLGSY
KEVNGNISQLDDKHIHSAPPGFGIKFSGKLLSSYLMLELKVYRARDQEGTKSIKCGRERI
SCNSHGQTGTHKDRLELNQALTTSDFSDGDSSPAEETNIKQRIIAFSIYPYGKERHAYHL
FMREEPSAWIRNHAAQSAEAGVCLGQHGHSQGGQVPKKCWPSGQSAIVTSIVGKDSQHSC
VTNLFDSKEGSSPQN

>gi568815595f:148641036_148842112|GENSCAN_predicted_CDS_1|768_bp
atgtgggttacacatttgacttcctatggggaaagggttggtcagaagaagaaaaatgtt
tgggctctgaagtctgatgcggtttcagcaaatgctctcacccaggcctctgcccagtgg
gctaaagctgaggctgacttactactgcaagtccaacgtgcccagaaacttggatcatat
aaggaagttaatgggaacatcagtcaactggatgataaacatatacattcagcaccacca
gggtttggtataaaattttctggaaagctgttatcttcatatctgatgttggagcttaaa
gtctacagggcaagagatcaagaagggacaaagagtataaaatgtggaagagaaaggata
agctgtaactcacacggtcaaactggaacccacaaggacagactggaactcaatcaggct
cttactacttctgacttcagtgatggagattccagtcctgcagaagagaccaatattaaa
caaagaatcattgcattttccatctacccgtatggaaaagaaagacatgcctatcactta
tttatgagagaggaaccttctgcttggatcaggaatcatgcagctcaatcagcagaggca
ggagtgtgccttggccaacacgggcattctcaaggtggccaggtgccaaagaagtgttgg
ccaagtggacagtctgctatcgtgacctctatagtgggtaaagacagccagcatagttgt
gtgactaatttgtttgacagtaaagaagggtcctccccgcaaaactga

>gi568815595f:148641036_148842112|GENSCAN_predicted_peptide_2|294_aa
MPGGPRGLTRAPGAASRPAEGRLRWCGSPARRLGVPAVRPHSLGPLQPLPIDHRRGPAEL
LAARRSRRPVTRCCLGSWLSGAGIIGEEAAPNLYKDDATVVPCQLSDQRSPGPEPRLARG
REGERAGEIQTTIREYYKHLYANKLENLEEMYKFLDTYTLPRLNQEEIDSLNRRITGSEI
VAIINSLPTKKSPGPDGFTAEFNQRYKEELVPFLLKLLQSIEKEGTLRNSFYEASIILIP
KPGRDSTKKENFRPISLMSIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQG

>gi568815595f:148641036_148842112|GENSCAN_predicted_CDS_2|885_bp
atgcctggcggtccgcgcggactcacccgcgccccgggcgctgcgtcacgtcccgccgag
ggccggctgcgctggtgcgggtctcccgcccgccgcctcggcgtcccggctgtgcgccct
cactcgctgggtccgctccagccgctccccatcgatcaccgccgcggcccggcagagctg
ctagcggcgcgccggtccagacgtcctgtcactcgctgctgcctggggtcctggctgtca
ggcgctggaatcattggcgaggaggcagctccgaatttatacaaggatgatgccacagtc
gtcccgtgtcaactatcagatcagcgttcacctggtcccgaaccccgcctagcgaggggt
cgtgagggagagcgagctggggaaatacaaactaccatcagagaatactacaaacacctc
tatgcaaataaactagaaaatctggaagaaatgtataaattcctcgacacatacaccctc
ccaagactaaaccaggaagaaattgactctctgaatagacgaataacaggctctgaaatt
gtggcaataatcaatagcttaccaacaaaaaagagtccaggaccagatggattcacagcc
gaattcaaccagaggtacaaggaggaactggtaccattccttctgaaactactccaatca
atagaaaaagagggaaccctccgtaactcattttatgaggccagcatcatcctgatacca
aagccaggcagagactcaaccaaaaaagagaattttagaccaatatccttgatgagcatt
gatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagctt
atccaccatgatcaagtgggcttcatccctgggatgcaaggctga

>gi568815595f:148641036_148842112|GENSCAN_predicted_peptide_3|487_aa
MSLWSYWPQLAAKKGFEATDLNCVEEENCDFIPLASWTPTHGVFDIVFATNSTQVIKMIL
NSSTEDGIKRIQDDCPKAGRHNYIFVMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVA
SVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLS
IDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPAIIHRNVFFIENTNITVCAFH
YESQNSTLPIGLGLTKNILGFLFPFLIILTSYTLIWKALKKAYEIQKNKPRNDDIFKIIM
AIVLFFFFSWIPHQIFTFLDVLIQLGIIRDCRIADIVDTAMPITICIAYFNNCLNPLFYG
FLGKKFKRYFLQLLKYIPPKAKSHSNLSTKMSTLSYRPSDNATVNWSRLEVDQSQFFMRI
FQTGADEELAPVLAFLRHRKQLVLLNRDKPPRAHHREESIMSADATADLLRISQRHVTQE
PTDADSS

>gi568815595f:148641036_148842112|GENSCAN_predicted_CDS_3|1464_bp
atgtccttgtggtcctattggccacaactggcagccaaaaagggctttgaagccacagac
ttaaactgtgtagaggaggagaactgtgactttattccccttgcatcctggacacccaca
catggtgtatttgatatagtgtttgcaacaaattcgacccaggtgatcaaaatgattctc
aactcttctactgaagatggtattaaaagaatccaagatgattgtcccaaagctggaagg
cataattacatatttgtcatgattcctactttatacagtatcatctttgtggtgggaata
tttggaaacagcttggtggtgatagtcatttacttttatatgaagctgaagactgtggcc
agtgtttttcttttgaatttagcactggctgacttatgctttttactgactttgccacta
tgggctgtctacacagctatggaataccgctggccctttggcaattacctatgtaagatt
gcttcagccagcgtcagtttcaacctgtacgctagtgtgtttctactcacgtgtctcagc
attgatcgatacctggctattgttcacccaatgaagtcccgccttcgacgcacaatgctt
gtagccaaagtcacctgcatcatcatttggctgctggcaggcttggccagtttgccagct
ataatccatcgaaatgtatttttcattgagaacaccaatattacagtttgtgctttccat
tatgagtcccaaaattcaaccctcccgatagggctgggcctgaccaaaaatatactgggt
ttcctgtttccttttctgatcattcttacaagttatactcttatttggaaggccctaaag
aaggcttatgaaattcagaagaacaaaccaagaaatgatgatatttttaagataattatg
gcaattgtgcttttctttttcttttcctggattccccaccaaatattcacttttctggat
gtattgattcaactaggcatcatacgtgactgtagaattgcagatattgtggacacggcc
atgcctatcaccatttgtatagcttattttaacaattgcctgaatcctcttttttatggc
tttctggggaaaaaatttaaaagatattttctccagcttctaaaatatattcccccaaaa
gccaaatcccactcaaacctttcaacaaaaatgagcacgctttcctaccgcccctcagat
aatgccacagttaattggtccaggcttgaagtggaccaatcacagtttttcatgaggatt
tttcaaacaggcgctgatgaagagctggccccagtgttggcatttctgagacatagaaag
cagctggtgttactcaacagagataagcctcctagagctcaccacagagaggagagcatc
atgtctgcagatgccacagcagatctgctgagaatcagccagcgccatgtgacacaagaa
cccacagatgcggattcgtcctga

>gi568815595f:148641036_148842112|GENSCAN_predicted_peptide_4|135_aa
MYGGYVCVEEGQQWEVVFVWPTNQQQENLLAACKKYTLLGSVLDLLAESAASQDSQCWYS
PTSGKQETEEVQNKGRLLDTLTSPSFIELVSCSWVLRRTFREQPTKNQAEIKNDAYKRSL
CDSMSLSTVQREKFP

>gi568815595f:148641036_148842112|GENSCAN_predicted_CDS_4|408_bp
atgtatggaggttatgtgtgtgtggaggaggggcagcagtgggaggtggtttttgtgtgg
cccacgaatcagcaacaagagaatctcctggcagcttgtaagaaatacacactcttaggc
tctgtcctagacctactagcggaatcagcagcctcacaagattcccagtgttggtactca
cctacatcaggtaaacaggagacagaagaggtacaaaacaaggggagattgctggatacc
cttacatcaccaagcttcattgaattggtgtcatgctcttgggttttaagaagaacattc
cgagaacaaccaactaagaatcaggctgaaataaaaaatgatgcttacaaacgatccctc
tgtgactctatgtctctatccacagtccaacgtgagaaatttccttag

>gi568815595f:148641036_148842112|GENSCAN_predicted_peptide_5|398_aa
MAQELRDTCTSFSSQFNQVEERVLVIEDQMNEMKREEKFGEKRVKRNEQSLQEIWNYVKR
PNLRLIGVTEKILITIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEEVESLDRPITG
SEIEAIINSLPTKKSPGPDRFTAEFYQRYNEELVAFLLKLFQSTEKEGILPNSFYEASII
LIPKPGRDTTIKENFRLISLMNMDTKILNKILANRIQQHIKKLIHHDQVGFIPGVQDWFN
ICKSINIIHHINRTKDKNHMIISIDAEKAFDKMQQPFMLKTLNKLGTDALITYIRITSVE
KSLNDLKELKTMARELPDTCISFRSQFDQLEERVSVIEDQMNEMKREEKFREKRVKRNKQ
SLQEIWSYVKRPNLRLIGVPESDGENGTKLENTLQDII

>gi568815595f:148641036_148842112|GENSCAN_predicted_CDS_5|1197_bp
atggcacaagaactacgtgacacatgcacaagcttcagtagccaattcaatcaagtggaa
gaaagggtattagtgattgaagatcaaatgaatgaaatgaagcgagaagagaaatttgga
gaaaaaagagtaaaaagaaacgaacaaagcctccaagaaatatggaactatgtgaaaaga
ccaaatctacgtctgattggcgtaactgaaaaaatactaattaccatcagagaatactat
aaacacctctatgcaaataaactagaaaatctggaagaaatggataaattcctcgacaca
tacaccctcccaagactaaaccaggaagaagttgaatcgctggatagaccaataacaggt
tctgaaattgaggcaataattaatagcctaccaaccaaaaaaagtccaggaccagataga
ttcacagctgaattctaccagaggtacaacgaggagctggtagcattccttctgaaacta
ttccaatcaacagaaaaagagggaatcctccctaactcattttatgaggccagcatcatc
ctgataccaaagcctggcagagacacaacaataaaagagaattttagactaatatccctg
atgaacatggacacaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatc
aaaaagcttatccaccacgatcaagttggcttcatccctggggtgcaagactggttcaat
atatgcaaatcaataaacataatccatcatataaacagaaccaaagacaaaaatcacatg
attatctcaatagatgcagaaaaggcctttgacaaaatgcaacagcccttcatgctaaaa
actctcaataaactaggtactgatgcacttatcacttatattagaataaccagtgtagag
aagtccttaaatgacctgaaggagctgaaaaccatggcacgagaactacctgacacatgc
ataagcttcaggagccaatttgatcaactggaagaaagggtatcagtgattgaagatcaa
atgaatgaaatgaagcgagaagagaagtttagagaaaaaagagtaaaaagaaacaaacaa
agcctccaagaaatatggagctatgtgaaaagaccaaatctacgtctgattggtgtacct
gaaagtgatggggagaatggaaccaagttggaaaacactctgcaggatattatctag

>gi568815595f:148641036_148842112|GENSCAN_predicted_peptide_6|102_aa
MTKEKDWDSLGTATWERQPTKKWLRWGIAEKIPQNVKATLELGNRQRGWNSLEGSEEDRK
MWKSLEPPRDLLNGFDKHADSDMNNKVQAEVVSDGDEELVRN

>gi568815595f:148641036_148842112|GENSCAN_predicted_CDS_6|309_bp
atgacaaaggaaaaggactgggactctctagggacagcaacttgggaaagacaaccaaca
aaaaaatggttaaggtggggcattgccgaaaagataccccaaaatgtgaaagcgactttg
gaactgggtaacaggcagagaggttggaacagtttggagggctcagaagaagataggaaa
atgtggaagagtttggaacctcctagagacttgttgaatggctttgacaaacatgctgat
agtgatatgaacaataaggttcaggctgaggtggtctcagatggagatgaggaacttgtt
aggaactga

>gi568815595f:148641036_148842112|GENSCAN_predicted_peptide_7|277_aa
MLALLVLVTVALASAHHGGEHFEGEKVFRVNVEDENHINIIRELASTTQIDFWKPDSVTQ
IKPHSTVDFRVKAEDTVTVENVLKQNELQYKKQIPVSINLLHFPKTDTSSYPSSPIEGVT
RRKVQRMSLTYFIRMSLGQPEEKQTFDVCLKFSNLSGAAEGHQEEPEDNMRIYGECNVPS
TKAVALGFYVCSLEKNTLMFIGTPTLVRCRVLISNLRNVVEAQFDSRVRATGHSYEKYNK
WETVGKAGQNKPAIFMDCGFHAREWISPAFCQWFVRE

>gi568815595f:148641036_148842112|GENSCAN_predicted_CDS_7|831_bp
atgttggcactcttggttctggtgactgtggccctggcatctgctcatcatggtggtgag
cactttgaaggcgagaaggtgttccgtgttaacgttgaagatgaaaatcacattaacata
atccgcgagttggccagcacgacccagattgacttctggaagccagattctgtcacacaa
atcaaacctcacagtacagttgacttccgtgttaaagcagaagatactgtcactgtggag
aatgttctaaagcagaatgaactacaatacaagaaacagattccagttagtattaattta
ttacactttccaaaaacagacacaagttcgtacccaagttcaccaattgaaggagtgacc
aggaggaaggttcagaggatgtccctgacatacttcatcagaatgtccttggggcagcca
gaggagaagcagacttttgatgtgtgtctgaaattctctaatctctctggagcagctgaa
ggtcatcaggaagaaccagaggacaacatgagaatttatggagagtgcaatgtgccatct
actaaagcagtggctctggggttttatgtgtgttcactggagaaaaatacacttatgttc
ataggaacacccactttggttcgttgcagggtactgataagcaacctgagaaatgtggtg
gaggctcagtttgatagccgggttcgtgcaacaggacacagttatgagaagtacaacaag
tgggaaacggttggcaaagctggacaaaataagcctgccattttcatggactgtggtttc
catgccagagagtggatttctcctgcattctgccagtggtttgtaagagag