Result of FASTA (ccds) for pF1KB7147
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7147, 346 aa
  1>>>pF1KB7147 346 - 346 aa - 346 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4477+/-0.000891; mu= 15.7272+/- 0.053
 mean_var=120.8412+/-35.009, 0's: 0 Z-trim(107.5): 248  B-trim: 1123 in 2/46
 Lambda= 0.116672
 statistics sampled from 9248 (9646) to 9248 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.296), width:  16
 Scan time:  2.800

The best scores are:                                      opt bits E(32554)
CCDS12459.1 FFAR3 gene_id:2865|Hs108|chr19         ( 346) 2341 405.5 3.4e-113
CCDS12461.1 FFAR2 gene_id:2867|Hs108|chr19         ( 330)  851 154.7   1e-37
CCDS4032.1 F2R gene_id:2149|Hs108|chr5             ( 425)  460 89.0 7.8e-18
CCDS12458.1 FFAR1 gene_id:2864|Hs108|chr19         ( 300)  452 87.5 1.6e-17
CCDS4033.1 F2RL1 gene_id:2150|Hs108|chr5           ( 397)  441 85.8 6.9e-17
CCDS8553.1 LPAR5 gene_id:57121|Hs108|chr12         ( 372)  416 81.5 1.2e-15
CCDS2148.1 GPR17 gene_id:2840|Hs108|chr2           ( 367)  404 79.5 4.9e-15
CCDS12350.1 F2RL3 gene_id:9002|Hs108|chr19         ( 385)  401 79.0 7.2e-15
CCDS58959.1 F2RL2 gene_id:2151|Hs108|chr5          ( 352)  400 78.8 7.6e-15
CCDS4031.1 F2RL2 gene_id:2151|Hs108|chr5           ( 374)  400 78.8 7.9e-15
CCDS14115.1 P2RY8 gene_id:286530|Hs108|chrY        ( 359)  374 74.4 1.6e-13
CCDS14115.1 P2RY8 gene_id:286530|Hs108|chrX        ( 359)  374 74.4 1.6e-13
CCDS2368.1 GPR1 gene_id:2825|Hs108|chr2            ( 355)  373 74.2 1.8e-13
CCDS9412.1 CYSLTR2 gene_id:57105|Hs108|chr13       ( 346)  371 73.9 2.2e-13
CCDS10429.1 SSTR5 gene_id:6755|Hs108|chr16         ( 364)  366 73.1 4.1e-13
CCDS14398.1 P2RY4 gene_id:5030|Hs108|chrX          ( 365)  365 72.9 4.6e-13
CCDS42856.1 SSTR4 gene_id:6754|Hs108|chr20         ( 388)  365 72.9 4.8e-13
CCDS14441.1 LPAR4 gene_id:2846|Hs108|chrX          ( 370)  361 72.2 7.4e-13
CCDS9410.1 LPAR6 gene_id:10161|Hs108|chr13         ( 344)  350 70.4 2.6e-12
CCDS12669.1 GPR4 gene_id:2828|Hs108|chr19          ( 362)  350 70.4 2.6e-12
CCDS9482.1 OXGR1 gene_id:27199|Hs108|chr13         ( 337)  344 69.3 5.1e-12
CCDS2409.1 CXCR1 gene_id:3577|Hs108|chr2           ( 350)  344 69.4 5.2e-12
CCDS14416.1 CXCR3 gene_id:2833|Hs108|chrX          ( 368)  343 69.2   6e-12
CCDS9491.1 GPR18 gene_id:2841|Hs108|chr13          ( 331)  342 69.0 6.4e-12
CCDS48135.1 CXCR3 gene_id:2833|Hs108|chrX          ( 415)  343 69.3 6.5e-12
CCDS9666.1 SSTR1 gene_id:6751|Hs108|chr14          ( 391)  339 68.6   1e-11
CCDS2408.1 CXCR2 gene_id:3579|Hs108|chr2           ( 360)  332 67.4 2.2e-11
CCDS43518.1 OPRM1 gene_id:4988|Hs108|chr6          ( 446)  331 67.3 2.8e-11
CCDS47506.1 OPRM1 gene_id:4988|Hs108|chr6          ( 403)  330 67.1 2.9e-11
CCDS55069.1 OPRM1 gene_id:4988|Hs108|chr6          ( 389)  328 66.7 3.6e-11
CCDS47508.1 OPRM1 gene_id:4988|Hs108|chr6          ( 392)  328 66.7 3.6e-11
CCDS47505.1 OPRM1 gene_id:4988|Hs108|chr6          ( 397)  328 66.7 3.7e-11
CCDS55070.1 OPRM1 gene_id:4988|Hs108|chr6          ( 400)  328 66.7 3.7e-11
CCDS47504.1 OPRM1 gene_id:4988|Hs108|chr6          ( 406)  328 66.7 3.7e-11
CCDS43517.1 OPRM1 gene_id:4988|Hs108|chr6          ( 418)  328 66.8 3.8e-11
CCDS47507.1 OPRM1 gene_id:4988|Hs108|chr6          ( 420)  328 66.8 3.8e-11
CCDS47503.1 OPRM1 gene_id:4988|Hs108|chr6          ( 493)  328 66.8 4.2e-11
CCDS2737.1 CCR1 gene_id:1230|Hs108|chr3            ( 355)  325 66.2 4.8e-11
CCDS77026.1 CCR7 gene_id:1236|Hs108|chr17          ( 372)  325 66.2   5e-11
CCDS11369.1 CCR7 gene_id:1236|Hs108|chr17          ( 378)  325 66.2   5e-11
CCDS2733.1 CCR9 gene_id:10803|Hs108|chr3           ( 357)  324 66.0 5.4e-11
CCDS9492.1 GPR183 gene_id:1880|Hs108|chr13         ( 361)  324 66.0 5.5e-11
CCDS2732.1 CCR9 gene_id:10803|Hs108|chr3           ( 369)  324 66.0 5.6e-11
CCDS33063.1 C5AR1 gene_id:728|Hs108|chr19          ( 350)  320 65.3 8.6e-11
CCDS2684.1 CCR8 gene_id:1237|Hs108|chr3            ( 355)  320 65.3 8.7e-11
CCDS1405.1 GPR25 gene_id:2848|Hs108|chr1           ( 361)  320 65.3 8.7e-11
CCDS14258.1 GPR34 gene_id:2857|Hs108|chrX          ( 381)  320 65.4   9e-11
CCDS13556.1 OPRL1 gene_id:4987|Hs108|chr20         ( 370)  319 65.2   1e-10


>>CCDS12459.1 FFAR3 gene_id:2865|Hs108|chr19              (346 aa)
 initn: 2341 init1: 2341 opt: 2341  Z-score: 2145.8  bits: 405.5 E(32554): 3.4e-113
Smith-Waterman score: 2341; 99.7% identity (100.0% similar) in 346 aa overlap (1-346:1-346)

               10        20        30        40        50        60
pF1KB7 MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLQRRPVAVDVLLLNLTAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLQRRPVAVDVLLLNLTAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 DLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAAVSIERFLSVAHP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAAVSIERFLSVAHP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 LWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQGTNGTCYLEFRKDQLAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQGTNGTCYLEFRKDQLAI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 LLPVRLEMAVVLFVVPLIITSYCYSRLVWILGRGGSHRRQRRVAGLLAATLLNFLVCFGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LLPVRLEMAVVLFVVPLIITSYCYSRLVWILGRGGSHRRQRRVAGLLAATLLNFLVCFGP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 YNASHVVGYICGESPAWRIYVTLLSTLNSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQ
       ::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 YNVSHVVGYICGESPAWRIYVTLLSTLNSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQ
              250       260       270       280       290       300

              310       320       330       340      
pF1KB7 WQQESSMELKEQKGGEEQRADRPAERKTSEHSQGCGTGGQVACAES
       ::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 WQQESSMELKEQKGGEEQRADRPAERKTSEHSQGCGTGGQVACAES
              310       320       330       340      

>>CCDS12461.1 FFAR2 gene_id:2867|Hs108|chr19              (330 aa)
 initn: 824 init1: 322 opt: 851  Z-score: 790.6  bits: 154.7 E(32554): 1e-37
Smith-Waterman score: 851; 42.2% identity (75.3% similar) in 308 aa overlap (16-314:9-315)

               10        20        30        40         50         
pF1KB7 MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKL-QRRPVAVDVLLLNLTA
                      ... .:.. ::.::: ::::: .:::.. : .:. : .:::.:: 
CCDS12        MLPDWKSSLILMAYIIIFLTGLPANLLALRAFVGRIRQPQPAPVHILLLSLTL
                      10        20        30        40        50   

      60        70        80        90       100       110         
pF1KB7 SDLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAAVSIERFLSVAH
       .::::::.:::...:::....: :: ..: :..: :...:: .. .::..::::.:.:: 
CCDS12 ADLLLLLLLPFKIIEAASNFRWYLPKVVCALTSFGFYSSIYCSTWLLAGISIERYLGVAF
            60        70        80        90       100       110   

     120       130       140       150       160        170        
pF1KB7 PLWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQ-GTNGTCYLEFRKDQL
       :. ::   :   . ..... :... .::..: .... .   . . :.. ::: .:  .::
CCDS12 PVQYKLSRRPLYGVIAALVAWVMSFGHCTIVIIVQYLNTTEQVRSGNEITCYENFTDNQL
           120       130       140       150       160       170   

      180       190       200       210          220       230     
pF1KB7 AILLPVRLEMAVVLFVVPLIITSYCYSRLVWILGRG---GSHRRQRRVAGLLAATLLNFL
        ..::::::. .::: .:. .: .:: :.:::.      :..:: ::..:: ..::::::
CCDS12 DVVLPVRLELCLVLFFIPMAVTIFCYWRFVWIMLSQPLVGAQRR-RRAVGLAVVTLLNFL
           180       190       200       210        220       230  

         240       250       260       270       280       290     
pF1KB7 VCFGPYNASHVVGYICGESPAWRIYVTLLSTLNSCVDPFVYYFSSSGFQADFHELLRRL-
       :::::::.::.:::   .:: ::  ....:.::. .::...:::::  .  : . :. : 
CCDS12 VCFGPYNVSHLVGYHQRKSPWWRSIAVVFSSLNASLDPLLFYFSSSVVRRAFGRGLQVLR
            240       250       260       270       280       290  

             300       310       320       330       340      
pF1KB7 ---CGLWGQWQQESSMELKEQKGGEEQRADRPAERKTSEHSQGCGTGGQVACAES
           .: :.  ....   .:..:                                
CCDS12 NQGSSLLGRRGKDTAEGTNEDRGVGQGEGMPSSDFTTE                 
            300       310       320       330                 

>>CCDS4032.1 F2R gene_id:2149|Hs108|chr5                  (425 aa)
 initn: 326 init1: 193 opt: 460  Z-score: 433.6  bits: 89.0 E(32554): 7.8e-18
Smith-Waterman score: 460; 30.3% identity (60.3% similar) in 300 aa overlap (6-291:91-386)

                                        10           20        30  
pF1KB7                          MDTGPDQSYFSGNHW---FVFSVYLLTFLVGLPLN
                                     : : .  . :   :: :::  .:.:.::::
CCDS40 KNESGLTEYRLVSINKSSPLQKQLPAFISEDASGYLTSSWLTLFVPSVYTGVFVVSLPLN
               70        80        90       100       110       120

             40        50        60        70        80        90  
pF1KB7 LLALVVFVGKLQRRPVAVDVLLLNLTASDLLLLLFLPFRMVEAANGMHWPLPFILCPLSG
       ..:.:::. :.. .  :: : .:.:...:.:..  :::..    .:  : .   :: .  
CCDS40 IMAIVVFILKMKVKKPAV-VYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCRFVT
              130        140       150       160       170         

            100       110       120       130       140       150  
pF1KB7 FIFFTTIYLTALFLAAVSIERFLSVAHPLWYKTRPRLGQAGLVSVACWLLASAHCSVVYV
         :. ..: . :.....::.:::.:..:.   .   ::.:... .: : :: :    . .
CCDS40 AAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLL
     180       190       200       210       220       230         

            160        170       180        190       200       210
pF1KB7 IEFSGDISHSQGTN-GTCYLEFRKDQLAILLPVRLE-MAVVLFVVPLIITSYCYSRLVWI
        : . ..    : :  ::.  . .  :       .  ...:.: :::::.. ::  ..  
CCDS40 KEQTIQVP---GLNITTCHDVLNETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRC
     240          250       260       270       280       290      

              220         230       240         250       260      
pF1KB7 LGRGGSHRRQRRVAGLL--AATLLNFLVCFGPYNASHVVGY--ICGESPAWRIYVTLL--
       :. ..   :...  .:.  ::..  :..:::: :.  .. :  .   : .   : . :  
CCDS40 LSSSAVANRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLC
        300       310       320       330       340       350      

             270       280       290       300       310       320 
pF1KB7 ---STLNSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRAD
          :... :.::..::..::  :   . .:                              
CCDS40 VCVSSISCCIDPLIYYYASSECQRYVYSILCCKESSDPSSYNSSGQLMASKMDTCSSNLN
        360       370       380       390       400       410      

>>CCDS12458.1 FFAR1 gene_id:2864|Hs108|chr19              (300 aa)
 initn: 388 init1: 215 opt: 452  Z-score: 428.1  bits: 87.5 E(32554): 1.6e-17
Smith-Waterman score: 466; 33.8% identity (62.2% similar) in 275 aa overlap (18-282:9-282)

               10        20        30        40        50        60
pF1KB7 MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLQRRPVAVDVLLLNLTAS
                        :..:. .: .:.:::.::.   ... . : .   :  :::  :
CCDS12          MDLPPQLSFGLYVAAFALGFPLNVLAIRGATAHARLRLTPSLVYALNLGCS
                        10        20        30        40        50 

               70        80        90       100       110       120
pF1KB7 DLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAAVSIERFLSVAHP
       :::: . ::.. :::  .  ::::  :::. .   :  .:  . ::::.:  :.:..: :
CCDS12 DLLLTVSLPLKAVEALASGAWPLPASLCPVFAVAHFFPLYAGGGFLAALSAGRYLGAAFP
              60        70        80        90       100       110 

              130       140       150        160              170  
pF1KB7 LWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGD-ISHSQGT-------NGTCYLE
       : :..  :   .  : .: : :.  : ..:. .:  :  ..::. .       ::.    
CCDS12 LGYQAFRRPCYSWGVCAAIWALVLCHLGLVFGLEAPGGWLDHSNTSLGINTPVNGSPVCL
             120       130       140       150       160       170 

            180       190       200       210        220       230 
pF1KB7 FRKDQLAILLPVRLEMAVVLFVVPLIITSYCYSRLVWILGRGG-SHRRQRRVAGLLAATL
          :  :   :.:. ....:: .:: ::..::   .  :.:.: .:::. :.: . ...:
CCDS12 EAWDP-ASAGPARFSLSLLLFFLPLAITAFCYVGCLRALARSGLTHRRKLRAAWVAGGAL
              180       190       200       210       220       230

             240       250        260       270       280       290
pF1KB7 LNFLVCFGPYNASHVVGYICGE-SPAWRIYVTLLSTLNSCVDPFVYYFSSSGFQADFHEL
       :..:.: ::::::.:....  . . .::    . .. .  ..:.:  . . :        
CCDS12 LTLLLCVGPYNASNVASFLYPNLGGSWRKLGLITGAWSVVLNPLVTGYLGRGPGLKTVCA
              240       250       260       270       280       290

              300       310       320       330       340      
pF1KB7 LRRLCGLWGQWQQESSMELKEQKGGEEQRADRPAERKTSEHSQGCGTGGQVACAES
                                                               
CCDS12 ARTQGGKSQK                                              
              300                                              

>>CCDS4033.1 F2RL1 gene_id:2150|Hs108|chr5                (397 aa)
 initn: 355 init1: 133 opt: 441  Z-score: 416.7  bits: 85.8 E(32554): 6.9e-17
Smith-Waterman score: 441; 31.0% identity (61.4% similar) in 303 aa overlap (8-295:67-361)

                                      10          20        30     
pF1KB7                        MDTGPDQSYFSGNHWFVFS--VYLLTFLVGLPLNLLA
                                     : ..:.   ::   :: ..:.:::: : .:
CCDS40 SLIGKVDGTSHVTGKGVTVETVFSVDEFSASVLTGKLTTVFLPIVYTIVFVVGLPSNGMA
         40        50        60        70        80        90      

          40        50        60        70        80         90    
pF1KB7 LVVFVGKLQRRPVAVDVLLLNLTASDLLLLLFLPFRMVEAANGMHWPLPFILCP-LSGFI
       : ::. . ...  :: . . ::. .::: ....:....   .: .:     ::  : :: 
CCDS40 LWVFLFRTKKKHPAV-IYMANLALADLLSVIWFPLKIAYHIHGNNWIYGEALCNVLIGF-
        100       110        120       130       140       150     

          100       110       120       130       140       150    
pF1KB7 FFTTIYLTALFLAAVSIERFLSVAHPLWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIE
       :. ..: . ::.. .:..:.  ...:. . .: . . :  .:.: :::       .::..
CCDS40 FYGNMYCSILFMTCLSVQRYWVIVNPMGH-SRKKANIAIGISLAIWLLILLVTIPLYVVK
          160       170       180        190       200       210   

          160       170       180         190       200       210  
pF1KB7 FSGDISHSQGTNGTCYLEFRKDQLAI--LLPVRLEMAVVLFVVPLIITSYCYSRLVWILG
        .  :   . :  ::. .   .:: .  ..   : .:. .:. : ..:.  :  .. .: 
CCDS40 QTIFIPALNIT--TCH-DVLPEQLLVGDMFNYFLSLAIGVFLFPAFLTASAYVLMIRMLR
           220          230       240       250       260       270

                220       230       240       250           260    
pF1KB7 RGG----SHRRQRRVAGLLAATLLNFLVCFGPYNASHVVGYIC----GESPAWRIYVTLL
        ..    :.....:.  :....:  .:.:: : :   :: :.     :.: .. .:.. :
CCDS40 SSAMDENSEKKRKRAIKLIVTVLAMYLICFTPSNLLLVVHYFLIKSQGQSHVYALYIVAL
              280       290       300       310       320       330

            270       280       290       300       310       320  
pF1KB7 --STLNSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRADR
         ::::::.::::::: :  :.   .. :  ::                           
CCDS40 CLSTLNSCIDPFVYYFVSHDFRDHAKNAL--LCRSVRTVKQMQVSLTSKKHSRKSSSYSS
              340       350         360       370       380        

            330       340      
pF1KB7 PAERKTSEHSQGCGTGGQVACAES
                               
CCDS40 SSTTVKTSY               
      390                      

>>CCDS8553.1 LPAR5 gene_id:57121|Hs108|chr12              (372 aa)
 initn: 469 init1: 143 opt: 416  Z-score: 394.3  bits: 81.5 E(32554): 1.2e-15
Smith-Waterman score: 466; 33.9% identity (59.2% similar) in 304 aa overlap (5-290:16-311)

                          10        20        30        40         
pF1KB7            MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLQRRPVA
                      ::   .  .: . . :: :.. .::::: ::: ::.  :. . : 
CCDS85 MLANSSSTNSSVLPCPD---YRPTHRLHLVVYSLVLAAGLPLNALALWVFLRALRVHSV-
               10           20        30        40        50       

      50        60        70        80        90       100         
pF1KB7 VDVLLLNLTASDLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAAV
       :.: . ::.:::::. : :: :.   :   :::.: .::  .: ::  ..: . .::  .
CCDS85 VSVYMCNLAASDLLFTLSLPVRLSYYAL-HHWPFPDLLCQTTGAIFQMNMYGSCIFLMLI
         60        70        80         90       100       110     

     110       120         130       140       150       160       
pF1KB7 SIERFLSVAHPLWYK--TRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQGTNG
       ...:. ...:::  .   :::.  : :. .. : :  .    .  ..  .   . .    
CCDS85 NVDRYAAIVHPLRLRHLRRPRV--ARLLCLGVWALILVFAVPAARVHRPSRCRYRDLEVR
         120       130         140       150       160       170   

       170         180       190       200       210       220     
pF1KB7 TCYLEFRKDQL--AILLPVRLEMAVVLFVVPLIITSYCYSRLVWILGRGGSHRRQRR--V
        :.  : .:.:  . :::. :   .. :..::  . :  .:. : :.:  . . :::  .
CCDS85 LCFESF-SDELWKGRLLPLVLLAEALGFLLPLAAVVYSSGRVFWTLARPDATQSQRRRKT
            180       190       200       210       220       230  

           230       240             250        260            270 
pF1KB7 AGLLAATLLNFLVCFGPYNASHVV-GY-----ICGESPAW-RIY-----VTLLSTLNSCV
       . :: :.:. ::.:: :::.. .: :      . .  ::  :.      ..::.  :  .
CCDS85 VRLLLANLVIFLLCFVPYNSTLAVYGLLRSKLVAASVPARDRVRGVLMVMVLLAGANCVL
            240       250       260       270       280       290  

             280       290       300       310       320       330 
pF1KB7 DPFVYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRADRPAERKTSEH
       ::.:::::. ::.  .. :                                         
CCDS85 DPLVYYFSAEGFRNTLRGLGTPHRARTSATNGTRAALAQSERSAVTTDATRPDAASQGLL
            300       310       320       330       340       350  

>>CCDS2148.1 GPR17 gene_id:2840|Hs108|chr2                (367 aa)
 initn: 339 init1: 197 opt: 404  Z-score: 383.4  bits: 79.5 E(32554): 4.9e-15
Smith-Waterman score: 404; 30.1% identity (59.2% similar) in 292 aa overlap (19-296:64-342)

                           10        20        30        40        
pF1KB7             MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLQRRPV
                                     : ::: :...:  : ::: .:. . ..  .
CCDS21 VAPPGLITNFSLATAEQCGQETPLENMLFASFYLLDFILALVGNTLALWLFI-RDHKSGT
            40        50        60        70        80         90  

       50        60        70        80        90       100        
pF1KB7 AVDVLLLNLTASDLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAA
        ..:.:..:...::  .: :: :.:   .: :::.  : : :.::.:. ..: .  ::. 
CCDS21 PANVFLMHLAVADLSCVLVLPTRLVYHFSGNHWPFGEIACRLTGFLFYLNMYASIYFLTC
            100       110       120       130       140       150  

      110       120       130       140       150       160        
pF1KB7 VSIERFLSVAHPLWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQGTNGT
       .: .:::...::.      :   : :. .  :.....  . . :   . . .:.     .
CCDS21 ISADRFLAIVHPVKSLKLRRPLYAHLACAFLWVVVAVAMAPLLVSPQTVQTNHTV----V
            160       170       180       190       200            

      170       180       190       200       210         220      
pF1KB7 CYLEFRKDQLAILLPVRLEMAVVLFVVPLIITSYCYSRLVWILGRGGS--HRRQRRVAGL
       : :.. ... .    : : .:   :. :.: :  ::  ..  : .:    .: . ... .
CCDS21 C-LQLYREKASHHALVSLAVA---FTFPFITTVTCYLLIIRSLRQGLRVEKRLKTKAVRM
       210       220          230       240       250       260    

        230       240               250           260       270    
pF1KB7 LAATLLNFLVCFGPYNASHVV--------GYICGESP----AWRIYVTLLSTLNSCVDPF
       .: .:  ::::: ::.... :        :  :. .     : :: .. :..::. .::.
CCDS21 IAIVLAIFLVCFVPYHVNRSVYVLHYRSHGASCATQRILALANRI-TSCLTSLNGALDPI
          270       280       290       300        310       320   

          280       290       300       310       320       330    
pF1KB7 VYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRADRPAERKTSEHSQG
       .:.: .  :.   : :   :::                                      
CCDS21 MYFFVAEKFR---HALCNLLCGKRLKGPPPSFEGKTNESSLSAKSEL             
           330          340       350       360                    

>>CCDS12350.1 F2RL3 gene_id:9002|Hs108|chr19              (385 aa)
 initn: 347 init1: 207 opt: 401  Z-score: 380.5  bits: 79.0 E(32554): 7.2e-15
Smith-Waterman score: 401; 34.1% identity (59.4% similar) in 293 aa overlap (5-284:64-348)

                                         10            20        30
pF1KB7                           MDTGPDQSYFSGNHW----FVFSVYLLTFLVGLP
                                     ::.:      :    .: ..: :...::::
CCDS12 GGDDSTPSILPAPRGYPGQVCANDSDTLELPDSSRALLLGWVPTRLVPALYGLVLVVGLP
            40        50        60        70        80        90   

               40        50        60        70        80        90
pF1KB7 LNLLALVVFVGKLQRRPVAVDVLLLNLTASDLLLLLFLPFRMVEAANGMHWPLPFILCPL
        : ::: :.. .  : : .  .::.::.:.:::: : :: :..    :..::.    : :
CCDS12 ANGLALWVLATQAPRLPST--MLLMNLAAADLLLALALPPRIAYHLRGQRWPFGEAACRL
           100       110         120       130       140       150 

              100       110       120        130       140         
pF1KB7 SGFIFFTTIYLTALFLAAVSIERFLSVAHPLWYKT-RPRLGQAGLVSVACWLLASAHCSV
       .   ..  .: ..:.:::::..:.:...:::  .. : :    ::  .: ::.:.:    
CCDS12 ATAALYGHMYGSVLLLAAVSLDRYLALVHPLRARALRGRRLALGLC-MAAWLMAAALALP
             160       170       180       190        200       210

     150       160       170        180       190       200        
pF1KB7 VYVIEFSGDISHSQGTNGTCYLEFRKD-QLAILLPVRLEMAVVLFVVPLIITSYCYSRLV
       . . . .  ...:. .   :.  .  : : .   :.   .:..   .::.    ::.  .
CCDS12 LTLQRQTFRLARSDRV--LCHDALPLDAQASHWQPAFTCLALLGCFLPLLAMLLCYGATL
              220         230       240       250       260        

      210       220       230       240       250            260   
pF1KB7 WILGRGGSHRRQRRVAGLLAATLLNFLVCFGPYNASHVVGYICGESP-AWR----IYV-T
         :. .:  ::  ..  : :..: . .. : : :   .. :    :: ::      :: .
CCDS12 HTLAASG--RRYGHALRLTAVVLASAVAFFVPSNLLLLLHY-SDPSPSAWGNLYGAYVPS
      270         280       290       300        310       320     

             270       280       290       300       310       320 
pF1KB7 L-LSTLNSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRAD
       : :::::::::::.::. :. :.                                     
CCDS12 LALSTLNSCVDPFIYYYVSAEFRDKVRAGLFQRSPGDTVASKASAEGGSRGMGTHSSLLQ
         330       340       350       360       370       380     

>>CCDS58959.1 F2RL2 gene_id:2151|Hs108|chr5               (352 aa)
 initn: 341 init1: 235 opt: 400  Z-score: 380.0  bits: 78.8 E(32554): 7.6e-15
Smith-Waterman score: 400; 28.5% identity (60.6% similar) in 277 aa overlap (16-280:74-340)

                              10        20        30        40     
pF1KB7                MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLQR
                                     .. ..:::.:.::.: : ..: ..   .. 
CCDS58 VKIKCPEESASHLHVKNATMGYLTSSLSTKLIPAIYLLVFVVGVPANAVTLWMLF--FRT
            50        60        70        80        90         100 

          50        60        70        80        90       100     
pF1KB7 RPVAVDVLLLNLTASDLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALF
       : . . :.  ::. .:.:. . :::...   :: .: .  .::  .  ::. ..: . :.
CCDS58 RSICTTVFYTNLAIADFLFCVTLPFKIAYHLNGNNWVFGEVLCRATTVIFYGNMYCSILL
             110       120       130       140       150       160 

         110       120       130       140       150            160
pF1KB7 LAAVSIERFLSVAHPLWYKTRPRLGQAGLVSVACWLLASAHCSVVYVI--EF---SGDIS
       :: .::.:.:...::. :.  :.   : ..    :  .  .    ...  :.   . ::.
CCDS58 LACISINRYLAIVHPFTYRGLPKHTYALVTCGLVWATVFLYMLPFFILKQEYYLVQPDIT
             170       180       190       200       210       220 

              170       180       190       200       210       220
pF1KB7 HSQGTNGTCYLEFRKDQLAILLPVRLEMAVVLFVVPLIITSYCYSRLVWILGRGGSHRRQ
         . ...::     ...  . :   . .:   :..:...  :::. ..  :. . .::  
CCDS58 TCHDVHNTC-----ESSSPFQLYYFISLAFFGFLIPFVLIIYCYAAIIRTLN-AYDHRWL
             230            240       250       260        270     

               230       240           250       260         270   
pF1KB7 RRV-AGLLAATLLNFLVCFGPYNA----SHVVGYICGESPAWRIY-VTL-LSTLNSCVDP
         : :.::   :. : .::.: :      :.  :  . .  . :: ..: :..::::.::
CCDS58 WYVKASLL--ILVIFTICFAPSNIILIIHHANYYYNNTDGLYFIYLIALCLGSLNSCLDP
         280         290       300       310       320       330   

           280       290       300       310       320       330   
pF1KB7 FVYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRADRPAERKTSEHSQ
       :.:.. :                                                     
CCDS58 FLYFLMSKTRNHSTAYLTK                                         
           340       350                                           

>>CCDS4031.1 F2RL2 gene_id:2151|Hs108|chr5                (374 aa)
 initn: 341 init1: 235 opt: 400  Z-score: 379.7  bits: 78.8 E(32554): 7.9e-15
Smith-Waterman score: 400; 28.5% identity (60.6% similar) in 277 aa overlap (16-280:96-362)

                              10        20        30        40     
pF1KB7                MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLQR
                                     .. ..:::.:.::.: : ..: ..   .. 
CCDS40 VKIKCPEESASHLHVKNATMGYLTSSLSTKLIPAIYLLVFVVGVPANAVTLWMLF--FRT
          70        80        90       100       110       120     

          50        60        70        80        90       100     
pF1KB7 RPVAVDVLLLNLTASDLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALF
       : . . :.  ::. .:.:. . :::...   :: .: .  .::  .  ::. ..: . :.
CCDS40 RSICTTVFYTNLAIADFLFCVTLPFKIAYHLNGNNWVFGEVLCRATTVIFYGNMYCSILL
           130       140       150       160       170       180   

         110       120       130       140       150            160
pF1KB7 LAAVSIERFLSVAHPLWYKTRPRLGQAGLVSVACWLLASAHCSVVYVI--EF---SGDIS
       :: .::.:.:...::. :.  :.   : ..    :  .  .    ...  :.   . ::.
CCDS40 LACISINRYLAIVHPFTYRGLPKHTYALVTCGLVWATVFLYMLPFFILKQEYYLVQPDIT
           190       200       210       220       230       240   

              170       180       190       200       210       220
pF1KB7 HSQGTNGTCYLEFRKDQLAILLPVRLEMAVVLFVVPLIITSYCYSRLVWILGRGGSHRRQ
         . ...::     ...  . :   . .:   :..:...  :::. ..  :. . .::  
CCDS40 TCHDVHNTC-----ESSSPFQLYYFISLAFFGFLIPFVLIIYCYAAIIRTLN-AYDHRWL
           250            260       270       280       290        

               230       240           250       260         270   
pF1KB7 RRV-AGLLAATLLNFLVCFGPYNA----SHVVGYICGESPAWRIY-VTL-LSTLNSCVDP
         : :.::   :. : .::.: :      :.  :  . .  . :: ..: :..::::.::
CCDS40 WYVKASLL--ILVIFTICFAPSNIILIIHHANYYYNNTDGLYFIYLIALCLGSLNSCLDP
       300         310       320       330       340       350     

           280       290       300       310       320       330   
pF1KB7 FVYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRADRPAERKTSEHSQ
       :.:.. :                                                     
CCDS40 FLYFLMSKTRNHSTAYLTK                                         
         360       370                                             




346 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 05:17:01 2016 done: Fri Nov  4 05:17:02 2016
 Total Scan time:  2.800 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com