GENSCAN 1.0	Date run:  4-Nov-116	Time: 05:15:42

Sequence gi568815575f:78860521_79061537 : 201017 bp : 36.75% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -   3957   3952    6                               1.05
 1.01 Sngl -   4441   4085  357  1  0   71   44   164 0.772   6.11
 1.00 Prom -   4495   4456   40                              -5.65

 2.06 PlyA -   4611   4606    6                               1.05
 2.05 Term -   6223   5769  455  2  2   29   54   302 0.364  15.23
 2.04 Intr -  13832  13742   91  2  1  111   54    59 0.681   3.45
 2.03 Intr -  14091  13945  147  0  0   35   94    86 0.655   3.41
 2.02 Intr -  15264  15044  221  1  2   93   54   104 0.283   4.60
 2.01 Init -  37199  37061  139  2  1   65  103    69 0.036   6.45
 2.00 Prom -  40498  40459   40                              -3.55

 3.00 Prom +  44846  44885   40                              -3.75
 3.01 Init +  49805  49903   99  1  0   64  109    19 0.112   1.92
 3.02 Intr +  52798  53061  264  0  0   71   51   116 0.007   2.99
 3.03 Term +  68209  68385  177  0  0   83   38   157 0.049   6.90
 3.04 PlyA +  70197  70202    6                               1.05

 4.02 PlyA -  70324  70319    6                               1.05
 4.01 Sngl -  75506  75315  192  2  0   79   44   247 0.870  14.29
 4.00 Prom -  77138  77099   40                              -4.95

 5.00 Prom +  77151  77190   40                              -8.55
 5.01 Init +  84615  84674   60  2  0   67   72    79 0.928   5.50
 5.02 Intr +  84826  84975  150  0  0   15  110    71 0.671   1.44
 5.03 Term +  85690  85809  120  0  0   92   54   126 0.958   7.09
 5.04 PlyA +  86345  86350    6                               1.05

 6.00 Prom +  90502  90541   40                              -6.05
 6.01 Sngl + 100001 101020 1020  1  0   53   38   464 0.518  34.69
 6.02 PlyA + 101292 101297    6                               1.05

 7.04 PlyA - 101961 101956    6                               1.05
 7.03 Term - 105419 104881  539  0  2  -19   44   208 0.147  -0.88
 7.02 Intr - 111637 111406  232  1  1   76   92   140 0.200   9.62
 7.01 Init - 115464 115036  429  0  0   82   86   162 0.680  11.70
 7.00 Prom - 118887 118848   40                              -5.15

 8.00 Prom + 123622 123661   40                              -4.55
 8.01 Init + 129251 129595  345  1  0   35   58   196 0.249   8.56
 8.02 Intr + 131610 131697   88  2  1   26   61    67 0.213  -3.58
 8.03 Intr + 152128 152368  241  2  1   83   63   138 0.672   6.49
 8.04 Term + 152909 153029  121  2  1   63   37   104 0.347  -0.23
 8.05 PlyA + 155739 155744    6                               1.05

 9.02 PlyA - 158104 158099    6                               1.05
 9.01 Sngl - 167150 166815  336  2  0   71   48   162 0.815   6.28
 9.00 Prom - 167204 167165   40                              -5.65

10.02 PlyA - 167321 167316    6                               1.05
10.01 Sngl - 168836 168366  471  2  0   70   39   270 0.760  16.17
10.00 Prom - 175161 175122   40                              -5.35

11.00 Prom + 186563 186602   40                              -4.35
11.01 Sngl + 195465 195962  498  2  0   59   38   232 0.773  11.09
11.02 PlyA + 198034 198039    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  54569  54751  183  1  0   99   42   177 0.834   8.99


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:78860521_79061537|GENSCAN_predicted_peptide_1|118_aa
MGKDFMSKTPKAMATKAKIDKWDLIQLKSFCTAKETTIRVNKQPTKWEKIFTTYSSDKGL
ISRIYNELKQIYKEKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLTIREMQSK

>gi568815575f:78860521_79061537|GENSCAN_predicted_CDS_1|357_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattcaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aacaagcaacctacaaaatgggagaaaattttcacaacctactcatctgacaaagggcta
atatccagaatctacaatgaactcaaacaaatttacaaggaaaaaacaaacaaccccatc
aaaaagtgggcgaaggatatgaacagacacttctcaaaagaagacatctatgcagccaaa
aaacacatgaaaaaatgttcaccatctctgactatcagagaaatgcaaagcaaatga

>gi568815575f:78860521_79061537|GENSCAN_predicted_peptide_2|350_aa
MKDKIKFKKEPTDVIELKKSLQEFDNIIGSRKNKIDQDEEIISELNVRPFFCRAAMVFWG
PTLDSIYLVSSNTQRCHQWRLQNRKCVCLLLLLGTPPKKGTNLMPTGTLLYEVSGDPCWE
CLLKWLPTQVAATSAQLFAWDPRPWWCGFMRVPPDLRVAKIHGKSVVYQGCDNYLVTSNE
RTRVPQLKMQNSFAILILLGKQGLEWTSSKLQQTCSCGSCLLEGKLTNRKDIHTKNPSVH
HHHQRPKVDKTTKMGKKQSRKTGNSKKQSASPPPKECSSSPATEQSWTENDFDELREEGF
RRSNYSELQEEIQTKGKEVENFEKNLDEYITRITNTEKCLKELMELKAKA

>gi568815575f:78860521_79061537|GENSCAN_predicted_CDS_2|1053_bp
atgaaggacaaaataaagtttaagaaagaaccgactgatgtgatagagctaaaaaagtca
ctacaagaatttgataatataataggaagtaggaaaaacaaaatagaccaagatgaagaa
ataatttcagagcttaatgtcaggcccttcttctgtagggctgctatggttttctggggg
cccactctggactctatttacctggtttcctccaacacccagaggtgtcaccagtggagg
ctgcagaacagaaaatgtgtctgcctgctccttcttctaggaactccacccaagaagggc
accaacctgatgccaaccggaacgctcctgtatgaggtgtctggagacccctgttgggag
tgcctgctcaagtggttgcccactcaagtggccgccacgagtgcacagctctttgcttgg
gacccaaggccttggtggtgtgggttcatgagggtacctcctgatctgcgggttgcaaag
atccatgggaaaagtgtggtttaccagggttgtgacaactacctagtcacatccaatgag
agaacccgtgtacctcagttgaagatgcagaattcatttgccattttaattcttcttggc
aaacagggtctagagtggacctctagcaaactccaacagacctgcagctgtgggtcctgt
ctgttagaaggaaaactaacaaacagaaaggacatccacaccaaaaacccatctgtacat
caccatcatcaaagaccaaaagtagataaaaccacaaagatggggaaaaaacagagcaga
aaaactggcaactctaaaaagcagagcgcctctcctcctccaaaggaatgcagctcctca
ccagcaacagaacaaagctggacggaaaatgactttgacgagttgagagaagaaggcttc
agacgatcaaactactccgagctacaggaggaaattcaaaccaaaggcaaagaagttgaa
aactttgaaaaaaatttagacgaatatataactagaataaccaatacagagaagtgctta
aaggagctgatggagctgaaagccaaggcttga

>gi568815575f:78860521_79061537|GENSCAN_predicted_peptide_3|179_aa
MVRLPRTHTLTTGMGDYPPARASPSASFMEKCQTKELHHVATANTGPQGIWPGYHECSLK
VQGLFSQLLVDVVRPETHPSGQWATFSPRADPEMLSQSLGLELRTPRHSWCSMPCSLAVP
KVTLMQEVGSHVLGELHPYGFAEYSLPPGCLYWLVLSVCSFYRCTVQAVSGSTILRSGG

>gi568815575f:78860521_79061537|GENSCAN_predicted_CDS_3|540_bp
atggtgaggcttcccagaactcacactctgactactggaatgggtgattaccctccggct
agggccagtccaagtgcttccttcatggaaaaatgtcagacaaaggagcttcaccacgtg
gccactgccaacacaggcccacagggaatatggccaggatatcatgaatgttcacttaag
gtccaagggctctttagtcagcttctggtggatgttgtcaggcctgagactcacccttca
ggacaatgggctaccttctcacccagggcagatccagaaatgctatcccagagccttggc
ctggaattgcggaccccgagacattcttggtgctctatgccctgttctctagctgtacct
aaggtcacactgatgcaagaggtgggctcccatgtccttggggagctccacccctatggc
tttgcagagtacagccttcctcctggatgcctttattggctggtattgagtgtctgcagc
ttttacagatgcacagtgcaagctgtcagtggatctacgattctgcggtctggaggatga

>gi568815575f:78860521_79061537|GENSCAN_predicted_peptide_4|63_aa
MWNSSYGGTQTTGMLLTDLQREGTESGQREDTEAGLKGEKVGNSMQDITSGIIAAPAGLQ
ENQ

>gi568815575f:78860521_79061537|GENSCAN_predicted_CDS_4|192_bp
atgtggaacagctcctatggagggacccagacgactggcatgttgctaacagatcttcag
agagaaggcactgagagtggacagagggaagatacagaagctgggttgaagggggagaaa
gttgggaactctatgcaggacattacatctggaatcatcgctgcccccgcagggctccaa
gagaaccaatga

>gi568815575f:78860521_79061537|GENSCAN_predicted_peptide_5|109_aa
MEPTGISENLDMSVVKEGDRVSVVRHQINSTSSFNNKCVSYQQDPCRQSKAFYPLLPAKK
QECLSQLSSRDRKGESIPDDFRVWSEWFLDPLKANFDRSSALLDSKAHE

>gi568815575f:78860521_79061537|GENSCAN_predicted_CDS_5|330_bp
atggaacctactggaatcagtgaaaatctagatatgtcggttgtcaaggaaggagatagg
gtttctgtggtgagacaccagataaactcaacttcctctttcaacaacaaatgtgtcagt
tatcagcaggatccatgccgccagagtaaagctttctaccctttactccctgcaaagaaa
caagagtgcttatcccagctaagctccagggataggaaaggagaaagtatcccagatgac
ttcagagtctggtcagagtggttccttgatcctttgaaagctaattttgaccgaagttca
gccttactggatagcaaagcccatgagtga

>gi568815575f:78860521_79061537|GENSCAN_predicted_peptide_6|339_aa
MANLDKYTETFKMGSNSTSTAEIYCNVTNVKFQYSLYATTYILIFIPGLLANSAALWVLC
RFISKKNKAIIFMINLSVADLAHVLSLPLRIYYYISHHWPFQRALCLLCFYLKYLNMYAS
ICFLTCISLQRCFFLLKPFRARDWKRRYDVGISAAIWIVVGTACLPFPILRSTDLNNNKS
CFADLGYKQMNAVALVGMITVAELAGFVIPVIIIAWCTWKTTISLRQPPMAFQGISERQK
ALRMVFMCAAVFFICFTPYHINFIFYTMVKETIISSCPVVRIALYFHPFCLCLASLCCLL
DPILYYFMASEFRDQLSRHGSSVTRSRLMSKESGSSMIG

>gi568815575f:78860521_79061537|GENSCAN_predicted_CDS_6|1020_bp
atggctaaccttgacaaatacactgaaacattcaagatgggtagcaacagtaccagcact
gctgagatttactgtaatgtcactaatgtgaaatttcaatactccctctatgcaaccacc
tatatcctcatattcattcctggtcttctggctaacagtgcagccttgtgggttctgtgc
cgcttcatcagcaagaaaaataaagccatcattttcatgatcaacctctctgtggctgac
cttgctcatgtattatctttacccctccggatttactattacatcagccaccactggcct
ttccagagagccctttgcctgctctgcttctacctgaagtatctcaacatgtatgccagc
atttgtttcctgacgtgcatcagtcttcaaaggtgcttttttctcctcaagcccttcagg
gccagagactggaagcgtaggtacgatgtgggcatcagtgctgccatctggatcgttgtg
gggactgcctgtttgccatttcccatcctgagaagcacagacttaaacaacaacaagtcc
tgctttgctgatcttggatacaagcaaatgaatgcagttgcgttggtcgggatgattaca
gttgctgagcttgcaggatttgtgatcccagtgatcatcatcgcatggtgtacctggaaa
actactatatccttgagacagccaccaatggctttccaagggatcagtgagaggcagaaa
gcactgcggatggtgttcatgtgtgctgcagtcttcttcatctgcttcactccctatcat
attaactttattttttacaccatggtaaaggaaaccatcattagcagttgtcccgttgtc
cgaatcgcactgtatttccaccctttttgcctgtgccttgcaagtctctgctgccttttg
gatccaattctttattactttatggcttcagagtttcgtgaccaactatcccgccatggc
agttctgtgacccgctcccgcctcatgagcaaggagagtggttcatcaatgattggctaa

>gi568815575f:78860521_79061537|GENSCAN_predicted_peptide_7|399_aa
MAIRKEKEKNGIQLGKEEVTLSLFANDMIVYLENPIISAQNLLKLISNFSKVSGYKINLQ
KSQAFLYTHKRQTETQIMSELPFTIATKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDT
DKWKNIPCSWIGRINMKMAILPKALRPKRKNCLHRQHSGPGCPTQYQDTVPHIPAIPAPA
SARSGPDTVWAVAPGVKGCHNPWRLSCGVKPIINEQCASVAWVTEQDSDKKERKERKKER
KKERKKERKKERKKERKRKKRKKKERERKKERKKERKKERKKERKERKERRKEGRKEGKK
GRKEGKKERRKEGEKKKEREREEGREEGKEGREKERKTERQKERKKERKKERKKERKKEK
REGGRKGRKEGRKKERQKERRKERKKERRKKKKKKERKK

>gi568815575f:78860521_79061537|GENSCAN_predicted_CDS_7|1200_bp
atggcaatcaggaaagagaaagaaaaaaatggtattcaattaggaaaagaggaagtcaca
ttgtccctgtttgcaaatgacatgattgtatatttagaaaaccccatcatctcagcccaa
aatcttcttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatctgcaa
aaatcacaagcattcttatatacccataaaagacaaacagagacccaaatcatgagtgaa
ctcccattcacaattgctacaaagagaataaaatatctaggaatccaacttacaagggat
gtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggacaca
gacaaatggaagaacattccatgctcatggataggaagaataaatatgaaaatggccata
ctgcccaaggccctgaggcccaagaggaaaaattgtcttcatcggcaacattcagggcct
ggctgccctacacagtatcaggacactgttccccacatcccagccattccagctccagcg
tcagctcgatcaggcccagatacagtttgggctgtagctccgggggtcaaaggctgccat
aatccttggaggctatcatgtggtgttaagcctatcatcaatgaacagtgtgcaagtgtg
gcatgggtgacagagcaagactctgacaagaaagaaagaaaagaaagaaagaaagaaaga
aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaggaaaagaaagaaa
agaaagaaaaaagaaagagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga
aagaaagaaaggaaagaaaggaaggaaagaaggaaagaaggaaggaaggaaggaaagaaa
ggaaggaaagaaggaaagaaggaaagaaggaaggaaggagaaaagaaaaaagaaagagag
agagaggaagggagggaggaagggaaggaaggaagggagaaagaaagaaagacagaaaga
cagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaag
agagagggagggaggaagggaaggaaggaagggagaaagaaagaaaggcagaaagaaaga
aggaaagaaagaaagaaagaaagaagaaagaagaagaagaagaaagaaagaaagaaatga

>gi568815575f:78860521_79061537|GENSCAN_predicted_peptide_8|264_aa
MYGNTWMSRQKLASRAGPSWITSGWTVWKENMGSELPHRVPTGAPPSGAVKRRSPSSTPK
NGRSTDSLYCEHGKAADTQCQFVKSARREAEPCKATEAVLSKVTGTHLLHHHDLDDGEKG
IRQLNSCISGTRDGSTCSSNKTTSGPSAAGLLQFVGGPLQTLSACVSPAEAAEQQRFLPV
PSSGSFVSEGNSPDSIQSSPEMTVDPCWEVSPNQEARGSGTHLRRGVNGSVLLAFQVPLG
FEKKLLQLARCLLSFVLEVQGLVA

>gi568815575f:78860521_79061537|GENSCAN_predicted_CDS_8|795_bp
atgtatggaaacacatggatgtccaggcagaagttagcatcaagggcagggccgtcatgg
ataacgtctggttggacagtatggaaggaaaacatgggatcagagctcccacacagagtt
cctactggggcaccacctagtggagctgtaaaaagaagatcaccatcctccactcccaag
aatggtagatctactgacagcttgtactgtgaacatggaaaagctgcagatactcaatgc
cagtttgtaaaatcagccaggagggaggctgaaccttgcaaagccacagaggctgtcctg
tccaaggtcacaggaacccacctcttgcatcaccatgacctggatgatggagaaaaaggt
attcgccagctaaatagctgcatatcaggtaccagggatgggtctacttgctcaagcaac
aaaaccacatcaggcccttctgctgcaggtttgctgcagtttgttggaggtccactccag
accctgtctgcctgtgtatcaccagcagaggctgcagaacagcaaagatttctgcctgtt
ccttcttctggaagcttcgtctcagaggggaactcaccagattccatccagagctctcct
gagatgactgtcgacccctgctgggaagtgtctcccaatcaggaggcaagggggtcaggg
acccacttgaggaggggagtgaacggttctgtcttgcttgcattccaggtgccactgggg
tttgaaaagaaactcctgcagctagctcggtgtctcctcagttttgtgctggaagtccag
ggcctggtagcgtaa

>gi568815575f:78860521_79061537|GENSCAN_predicted_peptide_9|111_aa
MGKDFMSKTPKAMATKAKIDKWDLIQLKSFCTAKETTIRVKRQPTEWEKIFAIYSSDKGL
ISRIYKELKQIYKKKTNNPIKKWVKDKNRHFSKEDIYVSNRHMKNAHHHWP

>gi568815575f:78860521_79061537|GENSCAN_predicted_CDS_9|336_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcgacaaaagccaaaattgac
aaatgggatctaattcaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aagaggcaacctacagaatgggagaaaatttttgcaatctactcatctgacaaagggcta
atatccagaatctacaaagaactcaaacaaatttacaagaaaaaaacaaacaaccccatc
aaaaagtgggtgaaggataagaacagacacttctcaaaagaagacatttatgtgtccaac
agacacatgaaaaatgctcatcatcactggccataa

>gi568815575f:78860521_79061537|GENSCAN_predicted_peptide_10|156_aa
MDKFLNTYTLPRLNQEEVESLNRPITGSEIETITNSLPTKKSPGPDRFTAEFYQTYKEEL
VQLLRKLFQSKGKEGIPPKSFYEAGIILIPKPGRDTTKKKENFRPISLMNIDAKILNKIL
ANRIQQHIKQLIHHDQVGFIPGMQDWFNIHKSINVI

>gi568815575f:78860521_79061537|GENSCAN_predicted_CDS_10|471_bp
atggataaattcctcaacacatacactctcccaagactaaaccaggaagaagttgaatcc
ctgaatagaccaataacaggctctgaaattgagacaataactaatagcctaccaaccaaa
aaaagtccaggaccagacagattcacagccgaattctaccagacgtacaaggaggagctg
gtacaattacttcggaaactattccaatcaaaaggaaaagagggaatcccccctaaatca
ttttatgaggctggcatcatcctgataccaaagcctggaagagacacaacaaaaaaaaaa
gagaattttagaccaatatccctcatgaacattgatgcaaaaatcctcaataagatactg
gcaaaccgaatccagcagcacatcaaacagcttatccaccatgatcaagtgggcttcatc
cctgggatgcaagactggttcaacatacacaaatcaatcaacgtaatctag

>gi568815575f:78860521_79061537|GENSCAN_predicted_peptide_11|165_aa
MEDQMNEMKWEEKFGEKRIKRNEQSLQEIWDYVKRPNLHLIGVPESERENGTKLENTLQD
IIQENFPNLARQANIQIQEIQRMPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGLV
THKGKPIRLTVDLSAETLQARREWGPIFNILKEKNFPCTCLCPEW

>gi568815575f:78860521_79061537|GENSCAN_predicted_CDS_11|498_bp
atggaagatcaaatgaatgaaatgaagtgggaagagaagtttggagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatctg
attggtgtacctgaaagtgaaagggagaatggaaccaagttggaaaacactctgcaggat
attatccaagagaacttccccaatctagcaaggcaggccaacattcagattcaggaaata
cagagaatgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtctggtt
acccacaaagggaagcccatcagactaacagtggatctctcagcagaaactctacaagcc
agaagagagtgggggccaatattcaacattcttaaagaaaagaattttccttgcacatgc
ctatgtccggaatggtaa