GENSCAN 1.0	Date run:  4-Nov-116	Time: 05:14:21

Sequence gi568815585r:96886749_97087759 : 201011 bp : 38.97% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1998   2077   80  2  2   49   54    88 0.032   2.08
 1.02 Term +  20728  20875  148  1  1   80   41   175 0.409   8.39
 1.03 PlyA +  21076  21081    6                               1.05

 2.00 Prom +  21209  21248   40                              -4.95
 2.01 Init +  21708  21772   65  2  2   73   66    52 0.880   2.17
 2.02 Term +  22832  23006  175  2  1   44   48   184 0.111   6.25
 2.03 PlyA +  24356  24361    6                               1.05

 3.00 Prom +  30456  30495   40                              -4.05
 3.01 Init +  32678  32821  144  1  0   68   49    56 0.559  -0.13
 3.02 Term +  33075  33530  456  2  0   58   46   278 0.990  14.74
 3.03 PlyA +  33891  33896    6                               1.05

 4.00 Prom +  34439  34478   40                              -6.15
 4.01 Sngl +  36347  37225  879  1  0   60   45   208 0.663   9.44
 4.02 PlyA +  38124  38129    6                               1.05

 5.05 PlyA -  38749  38744    6                               1.05
 5.04 Term -  41221  41127   95  2  2  134   42    31 0.336   0.11
 5.03 Intr -  42705  42467  239  2  2   17   57   163 0.018   2.44
 5.02 Intr -  47250  47178   73  1  1   98  103     1 0.012   0.15
 5.01 Init -  55918  55780  139  1  1   58   94   156 0.309  13.55
 5.00 Prom -  58407  58368   40                              -5.45

 6.13 PlyA -  58826  58821    6                              -0.45
 6.12 Term -  59585  59472  114  2  0   72   34   147 0.132   5.29
 6.11 Intr -  61106  60967  140  0  2   59   49   128 0.072   5.26
 6.10 Intr -  61324  61159  166  1  1   20   58   144 0.075   3.21
 6.09 Intr -  61748  61487  262  1  1  -39  -27   354 0.010   7.77
 6.08 Intr -  61943  61750  194  2  2   89  -36   256 0.033  10.67
 6.07 Intr -  71179  71015  165  1  0   45   72    78 0.005   1.14
 6.06 Intr -  81781  81708   74  2  2  110  107    33 0.225   5.61
 6.05 Intr -  83036  82919  118  2  1   40   92   123 0.045   7.02
 6.04 Intr - 100956 100052  905  1  2   46   80   444 0.000  29.48
 6.03 Intr - 105824 105760   65  1  2   97   78    96 0.159   6.94
 6.02 Intr - 107815 107659  157  2  1   35   27   162 0.051   2.95
 6.01 Init - 117864 117792   73  0  1   78   92    71 0.629   7.78
 6.00 Prom - 138390 138351   40                              -4.05

 7.03 PlyA - 139335 139330    6                               1.05
 7.02 Term - 140381 140173  209  0  2   97   47    71 0.239   0.42
 7.01 Init - 146743 146641  103  1  1   82   56    89 0.299   5.55
 7.00 Prom - 162919 162880   40                              -3.65

 8.06 PlyA - 164108 164103    6                               1.05
 8.05 Term - 167436 167323  114  0  0   68   46   175 0.087   8.89
 8.04 Intr - 182534 182372  163  1  1   18   63   184 0.161   7.96
 8.03 Intr - 191812 191721   92  1  2   53   66    51 0.060  -2.73
 8.02 Intr - 192645 192554   92  1  2   90  101    23 0.300   2.59
 8.01 Intr - 196955 196854  102  0  0  122   75    72 0.698   8.53

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  22856  23006  151  2  1   72   48   184 0.856   9.20
S.002 Sngl - 101011  99998 1014  1  0   87   44   522 0.991  44.46
S.003 Term - 164469 164021  449  1  2   62   43   204 0.878   7.69


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:96886749_97087759|GENSCAN_predicted_peptide_1|75_aa
MSDIQVMLMQDKGSHDLGQLLPCGFAGLWVLKYKTNEQQLFCSWPFALELQQSGRHRSGG
QDWHNVLVSGTQSHC

>gi568815585r:96886749_97087759|GENSCAN_predicted_CDS_1|228_bp
atgtctgacatccaagtcatgctgatgcaagacaagggttcccatgatcttggacagctt
ctcccctgtggctttgcaggactctgggttcttaagtacaagacgaatgagcagcagctc
ttctgttcatggccatttgccttagagttgcagcagagtggacggcaccggagtggaggt
caagattggcataacgtcttggtgtcagggacacaatctcattgctga

>gi568815585r:96886749_97087759|GENSCAN_predicted_peptide_2|79_aa
MRSLLRSEIEENTEHYTNQDKWLCQNLSPRLNVAECLKVVPGVYVVVGFPVDSDSQQELN
IAVLADEQTQIIVKEDNVF

>gi568815585r:96886749_97087759|GENSCAN_predicted_CDS_2|240_bp
atgaggtccttgctcaggagcgaaatagaagagaacactgaacattacactaatcaagat
aaatggctgtgccaaaatctgtcccctagactgaatgtagctgagtgtctgaaggtcgtg
cctggcgtctatgttgtagtcgggttcccagttgattctgactcacagcaagaactgaac
attgctgtgttagctgatgagcaaacacaaataattgtcaaagaagacaatgtgttctga

>gi568815585r:96886749_97087759|GENSCAN_predicted_peptide_3|199_aa
MPPSRGRQTLHTGELPPAPGRCPSGMKLQEEGASNNLCCSAASAGDTHDHNSSPAREQNW
TENEFDELTEVGFRRWVITNSSKLKEHVLVQCKEAKNLDKGLQELLTRITSLENNINDLM
DLKNTARELCEAYTSINSRIDQVEERISEIEDGLNEIKHEDKIREKRMRRNKQSLQKIQD
YVKRPNLHLIGLLESDREN

>gi568815585r:96886749_97087759|GENSCAN_predicted_CDS_3|600_bp
atgcctcccagcaggggtcgacaaacacttcatacaggagagctccctccagcacctggc
aggtgcccctctgggatgaagcttcaagaggaaggggcaagcaacaatctttgctgttct
gcagcctctgctggtgatacccacgatcacaactcttcaccagcaagggaacaaaactgg
acagagaatgaatttgatgaattaacagaagtaggcttcagaaggtgggtaataacaaac
tcctccaagctaaaggagcatgttctagtccaatgcaaggaagctaagaaccttgataaa
gggttacaggaactgctaactagaataaccagtttagagaataacataaatgacctgatg
gacctgaaaaacacagcaagagaactttgtgaagcatacacaagtatcaatagccgaatc
gatcaagtggaagaaaggatatcagagattgaagatggacttaatgaaataaagcatgaa
gacaagattagagaaaaaagaatgagaaggaacaaacaaagcctccaaaaaatacaggac
tatgtgaaaagaccaaacctacatttgattggtttacttgaaagtgacagggagaactga

>gi568815585r:96886749_97087759|GENSCAN_predicted_peptide_4|292_aa
MSELPFTIATKKIKYLEIQLTRDMKDFFKQNYKPLFKGIREDTNKWKNIACSWIGRANIM
KIAILPKVIHRFNSIPIKLPLTFFKELEKSTLNFMRNQERAHIAKTIISKKNKAGGIMLT
DFKLYYKATVIKTAWNWYHNRHIDQWNRTQASEMTPHTYNNLIFNKPDKNKQWGKDSLFN
NWCWENWIAICRKQKLDPFLTRYTKINSRWIKDLNIRPKALKTLEENLGNMIQDIGMGKD
FMTKTPKAMAIKAKIDKWDLIKLMSFCKAKETIIRVEQATYRMGENFCNLSI

>gi568815585r:96886749_97087759|GENSCAN_predicted_CDS_4|879_bp
atgagtgaactcccattcacaattgctacaaagaaaataaaatacctagaaatacaactt
acaagggacatgaaggacttcttcaagcagaactacaaaccactgttcaaaggaataaga
gaggacacaaacaaatggaaaaacattgcatgctcatggataggaagagccaatatcatg
aaaatagccatattgcccaaagtaattcatagattcaattctattcccatcaagctacca
ttgactttcttcaaagaattagaaaaatctactttaaatttcatgcggaaccaagaaaga
gcccatatagccaagacaatcataagcaaaaagaacaaagctggaggcatcatgctaact
gacttcaaattatactataaggctacagtaatcaaaacagcatggaattggtaccataac
agacacatagaccaatggaacagaacacaggcctcagaaatgactccacacacctacaac
aatctgattttcaacaaacctgacaaaaacaagcaatggggaaaggattccctatttaat
aactggtgttgggaaaactggatagccatatgcagaaagcagaaactggaccccttcctt
acacgttatacaaaaattaactcaagatggattaaagacttaaacataagacctaaagcc
ttaaaaaccctagaagaaaacctaggcaatatgattcaggacataggcatgggcaaagac
ttcatgactaaaacaccaaaagcgatggcaataaaagctaaaatagacaaatgggatcta
attaaactaatgagcttctgcaaagcaaaagaaactatcatcagagttgaacaggcaacc
tacagaatgggagaaaatttttgcaatctatccatctga

>gi568815585r:96886749_97087759|GENSCAN_predicted_peptide_5|181_aa
MGVLQTKGVKLAKAEAKERPDTFKPLTEFSFKWSIKSKDGEGAGEGVNKLSLLLSTTYSP
SSPSFPRTSLIFKWYGGLFGLLPWFPMSFWCGPADGHYLNQVAVPVRRRFSPERGKVGDS
LNGSNHMYIGVMVNTECQFDWVEGYKVLILGSELLQGAFWENSRKQGYVLDKVLSESRHN
L

>gi568815585r:96886749_97087759|GENSCAN_predicted_CDS_5|546_bp
atgggagtgcttcagacaaagggagtgaaattggcaaaagctgaagcaaaagaaaggcct
gatactttcaagcctctgactgaattcagttttaagtggagcatcaagagtaaggatgga
gaaggagctggagagggagtgaataaactctctctgcttctatcaaccacatattcacca
tcctctccgtccttcccgagaacttcactcatttttaagtggtatggaggcctgtttgga
ctcttgccttggtttcccatgagtttttggtgtgggccagctgatggtcattacctgaac
caagtagcagtaccggtaagaagaaggttttctccagagagaggcaaagttggggacagt
ttaaatggcagcaaccacatgtacattggtgtgatggttaatactgagtgtcaatttgat
tgggttgaaggatacaaagtattaatcctgggatctgagcttctgcaaggtgctttttgg
gagaattccaggaagcagggatatgttctggataaggtattgtcagaaagcaggcataat
ctatga

>gi568815585r:96886749_97087759|GENSCAN_predicted_peptide_6|810_aa
MPSEQIILVDPQGHRVQRYLKQVLVSRQTGMEDVQRSREWKPLSLCLLGSGRGGMLLARL
LGARTREHALARWASEGILESQSVRFLGVLASGQRSTNAAFGNCTDENIPLKMHYLPVIY
GIIFLVGFPGNAVVISTYIFKMRPWKSSTIIMLNLACTDLLYLTSLPFLIHYYASGENWI
FGDFMCKFIRFSFHFNLYSSILFLTCFSIFRYCVIIHPMSCFSIHKTRCAVVACAVVWII
SLVAVIPMTFLITSTNRTNRSACLDLTSSDELNTIKWYNLILTATTFCLPLVIVTLCYTT
IIHTLTHGLQTDSCLKQKARRLTILLLLAFYVCFLPFHILRVIRIESRLLSISCSIENQI
HEAYIVSRPLAALNTFGNLLLYVVVSDNFQQAVCSTVRCKGIDMIALFVRHIRDSVVSRK
EPKLVMPPDDAAFSVELKHKKIQLLDNIKIKASPNGLGLSVPKTAVVIGGDVHLVFLCVF
LSRMKEMFFSFRVLLHDKKEFLGRATTSLANSIPSVSAEQCRLHGIDGPAAVMKPDAQDL
ETKVHVLSVSSPVLGENAEESVDGENTLDTASKPDLQKIFQKQYISDSLNFDEETDGEEE
EGKKIRSQATYSEKERPNSTSSLHSTTDANASGSYAAAQPAGNELGEVEELEDFASVFDF
AAQPLHNRLRELESGKRANHPTALSPLIQLIYLVKEKGILANLDLTSGEPSLQFMTAASA
PSWPESGEVGSEGPRKMSVIIPGMTVNHEQIPFQPRNNDGSLFSRWQNKTMVRADKLAFT
KLLWLHTESLNGSSINIPMAGYCFYESIYV

>gi568815585r:96886749_97087759|GENSCAN_predicted_CDS_6|2433_bp
atgcccagtgagcagataattctggtggacccacaaggccatagagttcagcgatactta
aagcaagtgctggtttcccgccaaaccgggatggaggatgtccagaggtcccgggagtgg
aagccgctgtccctgtgtctactgggaagtgggcgaggcgggatgctgctggccaggctg
ctcggggcgaggacccgagaacacgcacttgctcgctgggcctcggagggaatcttggaa
tcccaatccgtgaggttcctgggtgtgctggcatcaggacagcggtccacgaacgctgct
tttggaaattgcactgatgaaaacatcccactcaagatgcactacctccctgttatttat
ggcattatcttcctcgtgggatttccaggcaatgcagtagtgatatccacttacattttc
aaaatgagaccttggaagagcagcaccatcattatgctgaacctggcctgcacagatctg
ctgtatctgaccagcctccccttcctgattcactactatgccagtggcgaaaactggatc
tttggagatttcatgtgtaagtttatccgcttcagcttccatttcaacctgtatagcagc
atcctcttcctcacctgtttcagcatcttccgctactgtgtgatcattcacccaatgagc
tgcttttccattcacaaaactcgatgtgcagttgtagcctgtgctgtggtgtggatcatt
tcactggtagctgtcattccgatgaccttcttgatcacatcaaccaacaggaccaacaga
tcagcctgtctcgacctcaccagttcggatgaactcaatactattaagtggtacaacctg
attttgactgcaactactttctgcctccccttggtgatagtgacactttgctataccacg
attatccacactctgacccatggactgcaaactgacagctgccttaagcagaaagcacga
aggctaaccattctgctactccttgcattttacgtatgttttttacccttccatatcttg
agggtcattcggatcgaatctcgcctgctttcaatcagttgttccattgagaatcagatc
catgaagcttacatcgtttctagaccattagctgctctgaacacctttggtaacctgtta
ctatatgtggtggtcagcgacaactttcagcaggctgtctgctcaacagtgagatgcaaa
ggtatagatatgatagcactctttgtccggcatattagagatagtgtagtttctagaaaa
gagcctaagttagtgatgcccccagatgatgctgccttctcagtagaacttaaacataaa
aagatccaactgttggataatattaaaatcaaggcttcccccaacgggctaggtttgtct
gtccccaagacggcggttgttattggtggtgatgttcatcttgtgtttctgtgtgtcttt
ctctccagaatgaaagaaatgtttttcagctttagggtcctgcttcatgacaaaaaggaa
tttctaggtcgtgctacaacttcccttgccaacagcattccttctgtgtctgctgagcaa
tgtcgtcttcatggcattgatggtccggctgcagtcatgaagccagatgctcaagatttg
gaaaccaaagttcatgttctttcagtcagctcccctgttctgggagaaaatgctgaagag
agtgttgatggggaaaacaccttggatactgcttccaagccagatcttcagaagattttc
caaaaacaatatatctcagatagtctgaactttgatgaggagactgatggcgaggaagaa
gaaggaaagaaaataagatcccaggctacatattcagaaaaagaaagacccaattccaca
tccagcctgcactcgaccacagatgcaaatgcttccggttcctatgctgctgcccaaccg
gccggtaacgagctgggggaagtggaggaactggaggactttgcttccgttttcgatttt
gcagcccaaccgctgcataaccggctgcgagaactagaaagcgggaaaagagcaaatcat
ccaactgccttatctccactgatccaactgatttatctcgtgaaggagaaaggtatactg
gcaaacttagatctaacctcaggggaaccaagtttacagtttatgaccgcggcgtctgcc
ccatcatggccggagtctggtgaagtgggatctgaaggtcctaggaaaatgtctgtgatc
attcccggaatgacggtgaatcacgagcagatcccatttcagccacgaaataacgacggc
agcttgttctcaagatggcagaacaaaactatggtccgggctgacaagctcgccttcact
aagctcctctggctgcatactgagtctctcaatggcagcagcatcaacattcccatggcc
ggctattgcttctatgaatccatttatgtttga

>gi568815585r:96886749_97087759|GENSCAN_predicted_peptide_7|103_aa
MVRFPLEIGEADGHVGMDSKEAMGPEEGLLYESFFYCKQEEESRSFPEHVAGTYPQLNTQ
VYLLQAPASHITAGHNSRKLSAFPNKGILSFAPLSNNTILLSF

>gi568815585r:96886749_97087759|GENSCAN_predicted_CDS_7|312_bp
atggtcagattcccacttgagataggcgaggctgatggccatgttgggatggactcaaag
gaggccatgggtccagaagaaggcctactctatgaaagtttcttttactgtaagcaggaa
gaagaaagcaggtcatttcctgagcatgttgctgggacataccctcagctaaatacgcaa
gtttatctcttacaagctcctgcttcccacataactgcaggacataattccaggaagctt
tctgcattccctaacaagggaattctctcctttgccccactttccaataacacaatcctc
ctttccttctga

>gi568815585r:96886749_97087759|GENSCAN_predicted_peptide_8|187_aa
XYKNRKASPRILPMTDGKITPGETQKRDAGKNYTGLELGPGGRLLDHGGGFSWFNIIPLG
AVITMIQPSQNGLLPLENNLVAYYLSDFPTLLGKAILLANSTLETDYGSMGVRWRMDTAC
SVSNSSGTMWRINILPVQKEGSYYGQQRGKECSSSPATEQSWMENDFGELREEGFRRSNF
SELKEEV

>gi568815585r:96886749_97087759|GENSCAN_predicted_CDS_8|564_bp
ngttacaagaataggaaggcctctcccagaatactccctatgacagatggtaaaattacg
ccaggagagacccagaagagagatgcaggcaagaactacacagggctggagttggggcct
ggtgggaggttactggatcatgggggtggtttctcatggtttaacatcatcccccttggt
gctgttatcacaatgatacaaccatcccaaaacggcctgctaccacttgaaaataacctg
gtggcctactatctcagtgattttcccaccttacttggtaaagccatactactggcaaat
tctaccctggaaactgactatgggtcaatgggagtccgctggcgaatggataccgcctgt
tctgtttccaattcatcaggaaccatgtggagaattaatatcctgcccgtccagaaggaa
gggagttattatggacagcaaagaggaaaggaatgcagctcctcaccagcaacagaacaa
agctggatggagaatgactttggcgagttgagagaagaaggcttcagacgatcaaacttc
tccgagctaaaggaggaagtttga