GENSCAN 1.0	Date run:  4-Nov-116	Time: 04:57:55

Sequence gi568815590r:108684184_108885098 : 200915 bp : 37.11% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    417    412    6                               1.05
 1.04 Term -   4321   4062  260  2  2   63   48   190 0.005   7.23
 1.03 Intr -  13003  12817  187  1  1   23   32   144 0.002   0.64
 1.02 Intr -  31228  31142   87  1  0  103   73    28 0.006   2.05
 1.01 Init -  54408  54337   72  0  0   95   98    54 0.303   8.22
 1.00 Prom -  63865  63826   40                              -3.65

 2.00 Prom +  77117  77156   40                              -6.25
 2.01 Init +  82739  82841  103  1  1   76   73    18 0.111  -0.41
 2.02 Intr +  84479  84644  166  0  1   95   13   149 0.069   6.20
 2.03 Intr +  89481  89593  113  0  2   98   84    57 0.493   5.40
 2.04 Term +  92469  92671  203  1  2   24   42   188 0.037   4.37
 2.05 PlyA +  92674  92679    6                              -0.45

 3.00 Prom +  92780  92819   40                              -9.15
 3.01 Init +  92946  93100  155  2  2   46   66   185 0.203  11.60
 3.02 Term +  98323  98482  160  1  1   98   38    82 0.197   0.63
 3.03 PlyA +  99280  99285    6                              -0.45

 4.02 PlyA -  99374  99369    6                               1.05
 4.01 Sngl - 100915  99998  918  1  0   61   31   869 0.982  74.58
 4.00 Prom - 127594 127555   40                              -1.55

 5.00 Prom + 133440 133479   40                              -3.85
 5.01 Init + 136817 137020  204  1  0   73    3   169 0.029   5.80
 5.02 Term + 145890 146063  174  2  0   75   41   133 0.079   4.08
 5.03 PlyA + 146768 146773    6                               1.05

 6.03 PlyA - 146847 146842    6                               1.05
 6.02 Term - 156136 155948  189  1  0   94   53   121 0.965   5.67
 6.01 Init - 166719 166642   78  0  0   74  111    97 0.969  11.71
 6.00 Prom - 195803 195764   40                              -3.55


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -   4295   4062  234  2  0   83   48   178 0.942   8.37
S.002 Sngl +   6891   7226  336  2  0   82   48   175 0.962   8.69
S.003 Init - 103474 103293  182  1  2   65  113   147 0.840  11.60


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:108684184_108885098|GENSCAN_predicted_peptide_1|201_aa
MTLAPLAFIPGKKNRNRCNAYINKAQEPQVQVCYLSISCNAEVWGMNDPLALALGIQCAV
WENETDDLLEDHRGLVSFPILIQFHSLSTVDTLKIKDEKENKNFRDSGNDSTSSKREGYQ
YCDAMGLRLEALAPLAAWEYDWETLAEHVRRSLGTSLIGLSVNMSCDLTRSRAVSKKAFI
VEENKDIKCGFSGRIIYKSLV

>gi568815590r:108684184_108885098|GENSCAN_predicted_CDS_1|606_bp
atgacccttgctcccctggctttcattccaggaaaaaagaacagaaacaggtgtaatgcc
tatatcaacaaggctcaggagccacaagtgcaagtttgttacctgagtatatcgtgtaat
gctgaagtttggggtatgaatgatcccctggccctggcattaggaatccagtgtgcagtg
tgggaaaatgagacagatgatcttctagaagatcaccgtggcctggtctcctttcccatt
ctaatccagttccacagcctttctactgtggacacattaaagatcaaagatgaaaaggaa
aacaagaactttagggacagtggaaatgacagcaccagcagcaaaagggagggataccaa
tattgtgatgccatggggctgagactggaagcccttgctcccctagctgcctgggagtat
gattgggaaactttagctgaacatgtgaggaggagccttggaacatccttgattggactg
agcgtgaacatgagttgtgatctcacacgctcaagggcagtatctaagaaagccttcatt
gtggaagaaaataaggatattaaatgtggattttctggtcgaataatatataaatcttta
gtttga

>gi568815590r:108684184_108885098|GENSCAN_predicted_peptide_2|194_aa
MKAGILSKSALPSSPACFIIAALAADYTVPTQIEGLGKTESEPVHMRVRFSATISSYLLL
SGLAQTFTCFPKDHGILEQPSPSTAVTFAKGPSSLVWRKLKKLYGEVQVVRNQIKTSCQQ
PAQTCQPWRCKFLSWRDVFMMVEARDIQISSFHMMMMMMMMMMMMKEGRRERGSGEKEEE
EIKKEKEDEEEKGA

>gi568815590r:108684184_108885098|GENSCAN_predicted_CDS_2|585_bp
atgaaggccggaatactcagcaagtctgctcttccatcttctcctgcctgctttattata
gctgcattggcagctgattacacggtacccacccagattgagggtctgggaaaaactgaa
agtgagccagtgcatatgagggtccgcttttctgctaccatcagctcctacctgctgctc
tcaggtctggctcaaaccttcacctgtttccctaaggatcatggaattctagaacaacca
tctccctcaactgctgtcacctttgccaagggacccagcagccttgtttggaggaaactc
aagaagctctatggagaggtccaagtagtaaggaatcaaatcaagacctcctgccaacag
ccagcacaaacttgtcagccatggagatgtaaatttctttcttggagggatgtatttatg
atggtggaagcaagagacatacaaataagcagtttccacatgatgatgatgatgatgatg
atgatgatgatgatgaaggaagggaggagagaaagagggagtggggaaaaggaggaagag
gaaattaagaaggaaaaggaggatgaggaggagaaaggagcataa

>gi568815590r:108684184_108885098|GENSCAN_predicted_peptide_3|104_aa
MEKLGSDVITRVEEQAFKLQIICLHGSEAFIIRRVVEIMQDTAHERRMPGTYSTLKSYAA
YLTHQINLTPMRAHPHKYPDSHILPKSPMYSTVVHNTTNFRHLK

>gi568815590r:108684184_108885098|GENSCAN_predicted_CDS_3|315_bp
atggagaaacttggatcagatgtcattacaagagtagaggagcaggcattcaaacttcag
atcatctgtctccatggttctgaagcctttattattcgacgtgttgtggagattatgcaa
gatactgcacatgaacgcagaatgcctggcacatattcaacccttaagtcatatgcagca
tacctcactcatcaaatcaatctgacacccatgagagctcatccacataaatatcctgat
tcacacattttgccaaagtcacccatgtattccacagttgtccacaacaccacaaacttc
agacatttgaaatag

>gi568815590r:108684184_108885098|GENSCAN_predicted_peptide_4|305_aa
MELHYLAKKSNQADLCDARDWSSRGLPGDQADTAATRAALCCQKQCASTPRATEMEGSKL
SSSPASPSSSLQNSTLQPDAFPPGLLHSGNNQITAERKVCNCCSQELETSFTYVDKNINL
EQRNRSSPSAKGHNHPGELGWENPNEWSQEAAISLISEEEDDTSSEATSSGKSIDYGFIS
AILFLVTGILLVIISYIVPREVTVDPNTVAAREMERLEKESARLGAHLDRCVIAGLCLLT
LGGVILSCLLMMSMWKGELYRRNRFASSKESAKLYGSFNFRMKTSTNENTLELSLVEEDA
LAVQS

>gi568815590r:108684184_108885098|GENSCAN_predicted_CDS_4|918_bp
atggagctccactaccttgctaagaagagcaaccaggcagacctctgtgatgccagggac
tggagttcaagagggctgcctggtgaccaggcagatacagcagccacaagagctgctctc
tgctgtcagaaacagtgtgcatccaccccaagagcaaccgagatggaagggtctaaactt
agttcttctccagcatccccctcctcctctctgcaaaacagtactcttcagccagatgcc
tttccaccaggacttctccactcagggaacaaccaaataacagcggaacggaaagtctgt
aactgctgcagccaggaattagaaacttcttttacctatgtggacaaaaacatcaacttg
gagcagcggaaccggagctcgccatcagcaaaagggcataatcaccctggggagcttggc
tgggaaaatccaaatgagtggtcccaagaggctgccatatctttgatatctgaagaggag
gatgatacaagttcagaagccacgtcttcagggaagtctatagactatggtttcatcagc
gccatcttgttcttggtcactgggatcctgctcgtgatcatctcttacatcgtcccacgg
gaagtgactgtggaccccaacactgtggcagcccgggagatggagcgcctggagaaggag
agtgcgaggctgggggctcacctggaccgctgtgtgattgcggggctctgcctcctcacg
ctggggggcgtcatcctgtcctgcttgttaatgatgtccatgtggaagggggagctctat
cgtcgaaacagatttgcctcttccaaagagtctgcaaaactctatggttctttcaacttc
aggatgaaaaccagcacgaatgaaaacactctggaactgtccttggtagaggaagatgcg
cttgctgtacagagttaa

>gi568815590r:108684184_108885098|GENSCAN_predicted_peptide_5|125_aa
MRESLELPRDMLNGCVKNADSDMDNEVQDEEVSDGDEELIGNWSKSNFCYAEAKRMAALC
PCGTLNLRRQFNSTLQIQVGDMSFSNVSQKYINSNGSQKRVVTVLFKSKGFAQKNWAPTT
SATYS

>gi568815590r:108684184_108885098|GENSCAN_predicted_CDS_5|378_bp
atgagggaaagtttggaacttcctagagacatgttaaatggttgtgtcaaaaatgctgat
agtgatatggacaatgaagtccaggatgaggaggtctcagatggagatgaggaacttatt
gggaactggagcaaaagtaacttttgttatgcagaagcaaagagaatggctgcattgtgc
ccctgtggaactctgaacttgaggaggcagtttaatagcaccctgcagatccaagtagga
gacatgagcttttccaatgtcagccaaaagtatattaattcaaatgggagtcaaaagagg
gttgtcactgtattgtttaaaagcaaaggttttgctcagaaaaactgggctccaactacc
tctgccacttactcatga

>gi568815590r:108684184_108885098|GENSCAN_predicted_peptide_6|88_aa
MQEDSNCTGLQKDKGDEARLLIEPPQTWTLLVLEPLDSELDLHHWTQFSGLQTQTGTYTI
SSPGSGLWICTGTTPLAFLGLQLGDGRL

>gi568815590r:108684184_108885098|GENSCAN_predicted_CDS_6|267_bp
atgcaggaggatagcaactgtacaggtttgcaaaaggacaagggtgatgaggctcgattg
ctgatagagccacctcagacatggacactcttggttcttgagcctttggattcagagcta
gacttacaccattggacacagttctcaggccttcaaactcagactgggacctacaccatc
agttctcctggatcaggcctttggatttgcactggaacaaccccattggctttcctgggt
ctccagcttggagatggcagactgtga