GENSCAN 1.0	Date run:  4-Nov-116	Time: 04:51:14

Sequence gi568815585r:20122698_20323480 : 200783 bp : 44.73% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4946   5094  149  1  2   67   78   143 0.361   8.76
 1.02 Intr +   9611   9754  144  2  0   65   83    38 0.091   0.40
 1.03 Intr +  13983  14148  166  0  1   70   81    77 0.153   5.16
 1.04 Term +  14861  14956   96  1  0  105   44    35 0.778  -1.23
 1.05 PlyA +  16136  16141    6                               1.05

 2.09 PlyA -  16372  16367    6                               1.05
 2.08 Term -  20603  19284 1320  2  0   20   39  2355 0.877 215.37
 2.07 Intr -  20770  20609  162  1  0   45   66   147 0.787   8.37
 2.06 Intr -  21935  21807  129  2  0  100   91    12 0.682   3.59
 2.05 Intr -  51430  51315  116  2  2  100   68     2 0.050  -0.43
 2.04 Intr -  53724  53698   27  1  0   99   96    15 0.729   1.49
 2.03 Intr -  54634  54494  141  2  0   96   71   163 0.951  15.72
 2.02 Intr -  55116  54987  130  0  1   50  -11    68 0.101  -6.63
 2.01 Init -  56765  56397  369  2  0   92   35   267 0.144  18.79
 2.00 Prom -  57164  57125   40                              -5.56

 3.03 PlyA -  57902  57897    6                               1.05
 3.02 Term -  59041  58838  204  1  0   61   55   145 0.965   5.87
 3.01 Init -  61947  61894   54  0  0   90   59    82 0.926   4.85
 3.00 Prom -  64759  64720   40                              -6.66

 4.02 PlyA -  64866  64861    6                               1.05
 4.01 Sngl -  66884  66204  681  2  0   62   42  1047 0.992  93.69
 4.00 Prom -  98618  98579   40                               0.94

 5.02 PlyA -  99296  99291    6                               1.05
 5.01 Sngl - 100783  99998  786  1  0   80   41   655 0.958  55.95
 5.00 Prom - 103841 103802   40                              -6.86

 6.00 Prom + 104032 104071   40                              -6.56
 6.01 Init + 105158 105245   88  1  1   76   59    20 0.491  -1.30
 6.02 Term + 108707 108975  269  0  2  142   41   147 0.690  11.06
 6.03 PlyA + 112583 112588    6                               1.05

 7.04 PlyA - 113959 113954    6                               1.05
 7.03 Term - 115143 115027  117  0  0   67   48    73 0.453  -0.26
 7.02 Intr - 118317 118093  225  0  0   66   58   132 0.608   6.18
 7.01 Init - 124976 124788  189  2  0   68   70   134 0.880   8.61
 7.00 Prom - 128376 128337   40                              -5.56

 8.10 PlyA - 129494 129489    6                               1.05
 8.09 Term - 131170 130935  236  2  2  130   53    29 0.526   0.08
 8.08 Intr - 132752 132647  106  2  1   24   80    74 0.520  -0.01
 8.07 Intr - 134367 134151  217  2  1   82  113   -25 0.017  -2.09
 8.06 Intr - 142080 141926  155  0  2   91   48    87 0.317   3.87
 8.05 Intr - 142659 142542  118  2  1   20  105    38 0.108  -0.83
 8.04 Intr - 147708 147598  111  2  0   60   89    84 0.239   5.19
 8.03 Intr - 162466 162294  173  1  2   65   96    38 0.007   1.04
 8.02 Intr - 166441 166215  227  2  2   10   71   130 0.019   1.20
 8.01 Init - 169987 169912   76  1  1   88   68   127 0.906   9.98
 8.00 Prom - 173271 173232   40                              -2.56

 9.02 PlyA - 173285 173280    6                               1.05
 9.01 Sngl - 179347 178679  669  1  0   55   35   201 0.862   7.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  46008  45839  170  1  2   54   37   154 0.902   4.94
S.002 Init -  96469  96397   73  1  1   81   98    80 0.974   7.54


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:20122698_20323480|GENSCAN_predicted_peptide_1|184_aa
MGLGKLLSNLALRERRRACPSGAYPEWAAGPARASLRVNAGALRVRSAVSVPHVATKAAL
SKPLIQSSFQALGTISYCPYEVFYRIHREGIPAGLPRRQENSSSIKSKALDNFPKVMLWE
KRGAGFSHLSMTTTAHLDSGVELSTVQDRYGFLAATVFPKLSIRTGVCTCRQYGKLPPIC
VWKS

>gi568815585r:20122698_20323480|GENSCAN_predicted_CDS_1|555_bp
atggggctggggaagttgctgagcaaccttgccctgcgagagcgaaggcgggcgtgtccc
tcgggggcgtaccccgagtgggcagcagggccagcccgcgcgtccctcagggtcaatgct
ggggccctgagggtgaggtcagctgtgagcgtacctcatgtggctacaaaagctgccctc
agcaagcctctaatccagagctcattccaagcattgggtacaatttcttactgcccctat
gaggtgttctacagaatccacagagagggaatcccggcagggctgccaaggagacaagaa
aactcatcatctataaagtcaaaggcgttagataactttcccaaagtcatgctgtgggag
aagagaggtgcaggattcagccacttgtccatgaccacaacggctcacctggactcgggc
gtggaactgtccaccgtacaggatcgttacgggttcctggccgcgactgtcttccccaaa
ctgtccatcaggacaggtgtttgcacttgtcggcaatatgggaaactcccaccaatttgt
gtttggaagagctga

>gi568815585r:20122698_20323480|GENSCAN_predicted_peptide_2|797_aa
MVNSAMFYDIAEPLSHISSELAADKVPNIAGNIHAVRSGENGFGHKGSCFHRIIPGLMCQ
GGDFTRHHDTGSKSIYGQKFDGENFILKHSGPGILCMANAGPDTNGSQVFICTAKTEWWA
SSQLERRARPCRQARAGRADQAQRRSPTEGQALLGSEAWAPVTGPWAWDFAAGTVLHGSK
MCLCFRHVPARGGHIGACLQTGGLRGEGGNQVARSLPVYQVSVWHCLKAWGWWGVLVHPW
LQPKLPGAGCATKKEASSCEQAERGSCLPGDVYLTLAELGLGVGLQLVPPPPWAAFFGVT
LLGQCLLVQVLGSCDACPVEKLPISPIPVPSRPLPPPMGADPALSRCSPVFMSIFLLQES
EAMGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEDVWGDEQSDFTCNTQQ
PGCENVCYDRAFPISHIRFWALQIIFVSTPTLIYLGHVLHIVRMEEKKKEREEEEQLKRE
SPSPKEPPQDNPSSRDDRGRVRMAGALLRTYVFNIIFKTLFEVGFIAGQYFLYGFELKPL
YRCDRWPCPNTVDCFISRPTEKTIFIIFMLAVACASLLLNMLEIYHLGWKKLKQGVTSRL
GPDASEAPLGTADPPPLPPSSRPPAVAIGFPPYYAHTAAPLGQARAVGYPGAPPPAADFK
LLALTEARGKGQSAKLYNGHHHLLMTEQNWANQAAERQPPALKAYPAASTPAAPSPVGSS
SPPLAHEAEAGAAPLLLDGSGSSLEGSALAGTPEEEEQAVTTAAQMHQPPLPLGDPGRAS
KASRASSGRARPEDLAI

>gi568815585r:20122698_20323480|GENSCAN_predicted_CDS_2|2394_bp
atggtcaattctgccatgttttatgacattgctgagcccttaagccacatctcttctgag
ctagctgcagacaaagttccaaacatagcaggaaacattcatgctgtgaggtctggagag
aatggatttggccataagggctcctgctttcacagaattattccagggcttatgtgccag
ggtggtgacttcacacgccatcatgacactggcagcaagtccatctatgggcagaaattt
gatggtgagaacttcatcctgaagcattcaggtcctggcatcttgtgcatggcaaatgct
ggacccgacacaaatggttcccaggttttcatctgtactgccaaaactgagtggtgggcc
agcagccagctggagcgcagggcgcggccgtgtcgtcaggcccgggctggcagggccgac
caggctcaaaggcgcagccccacggaagggcaggcgctgctgggcagcgaggcctgggca
ccggtcaccgggccttgggcctgggactttgccgccggcaccgtcctccacggctccaag
atgtgtctctgcttccggcacgtgcccgcgagagggggccacattggggcgtgtctccag
acagggggtctccgaggggagggcggcaaccaggtggcaagaagcctccctgtgtaccag
gtctcagtgtggcactgcctgaaggcctgggggtggtggggtgtcctggttcacccttgg
ctgcagccgaagctgcctggggcaggttgtgccaccaagaaagaggccagcagctgtgag
caggctgagagaggaagctgcctgcctggggatgtttacctaacacttgctgaattgggc
ctgggggtgggcctgcagctggtaccaccccctccttgggctgccttcttcggagtcaca
cttctggggcagtgcctgctcgtccaggtcctggggagctgcgatgcctgtcctgtggag
aagctgcccatcagccccatcccagtaccatccaggccgctgccgccgcccatgggtgcg
gacccggcactcagccgttgcagcccggtgttcatgagcattttcctcttacaggaatct
gaagcaatgggcgactggagctttctgggaagactcttagaaaatgcacaggagcactcc
acggtcatcggcaaggtttggctgaccgtgctgttcatcttccgcatcttggtgctgggg
gccgcggcggaggacgtgtggggcgatgagcagtcagacttcacctgcaacacccagcag
ccgggctgcgagaacgtctgctacgacagggccttccccatctcccacatccgcttctgg
gcgctgcagatcatcttcgtgtccacgcccaccctcatctacctgggccacgtgctgcac
atcgtgcgcatggaagagaagaagaaagagagggaggaggaggagcagctgaagagagag
agccccagccccaaggagccaccgcaggacaatccctcgtcgcgggacgaccgcggcagg
gtgcgcatggccggggcgctgctgcggacctacgtcttcaacatcatcttcaagacgctg
ttcgaggtgggcttcatcgccggccagtactttctgtacggcttcgagctgaagccgctc
taccgctgcgaccgctggccctgccccaacacggtggactgcttcatctccaggcccacg
gagaagaccatcttcatcatcttcatgctggcggtggcctgcgcgtccctgctgctcaac
atgctggagatctaccacctgggctggaagaagctcaagcagggcgtgaccagccgcctc
ggcccggacgcctccgaggccccgctggggacagccgatcccccgcccctgccccccagc
tcccggccgcccgccgttgccatcgggttcccaccctactatgcgcacaccgctgcgccc
ctgggacaggcccgcgccgtgggctaccccggggccccgccaccagccgcggacttcaaa
ctgctagccctgaccgaggcgcgcggaaagggccagtccgccaagctctacaacggccac
caccacctgctgatgactgagcagaactgggccaaccaggcggccgagcggcagcccccg
gcgctcaaggcttacccggcagcgtccacgcctgcagcccccagccccgtcggcagcagc
tccccgccactcgcgcacgaggctgaggcgggcgcggcgcccctgctgctggatgggagc
ggcagcagtctggaggggagcgccctggcagggacccccgaggaggaggagcaggccgtg
accaccgcggcccagatgcaccagccgcccttgcccctcggagacccaggtcgggccagc
aaggccagcagggccagcagcgggcgggccagaccggaggacttggccatctag

>gi568815585r:20122698_20323480|GENSCAN_predicted_peptide_3|85_aa
MGPRRAWLGQMAQATQAAERDLNVNRYLYIHVHCSSVHNSQEVEGAQVPISEWTEKQNVV
YACNGMLFSLKKEGISDTCYNMDEP

>gi568815585r:20122698_20323480|GENSCAN_predicted_CDS_3|258_bp
atggggccaaggagggcgtggctgggacagatggcgcaggccacgcaggccgctgagaga
gatctcaatgtgaacagatatttgtacatccatgttcattgcagctctgttcacaacagc
caagaggtggaaggagcccaagtgcccatcagcgaatggacagagaagcaaaatgtagtc
tatgcatgcaatggaatgttattcagccttaaaaaggaaggaatttctgacacatgctac
aacatggatgaaccttga

>gi568815585r:20122698_20323480|GENSCAN_predicted_peptide_4|226_aa
MDWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGC
KNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFIKGEIKSEFKDIEE
IKTQKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKCNAWPCPNTVDC
FVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSGKSKKPV

>gi568815585r:20122698_20323480|GENSCAN_predicted_CDS_4|681_bp
atggattggggcacgctgcagacgatcctggggggtgtgaacaaacactccaccagcatt
ggaaagatctggctcaccgtcctcttcatttttcgcattatgatcctcgttgtggctgca
aaggaggtgtggggagatgagcaggccgactttgtctgcaacaccctgcagccaggctgc
aagaacgtgtgctacgatcactacttccccatctcccacatccggctatgggccctgcag
ctgatcttcgtgtccacgccagcgctcctagtggccatgcacgtggcctaccggagacat
gagaagaagaggaagttcatcaagggggagataaagagtgaatttaaggacatcgaggag
atcaaaacccagaaggtccgcatcgaaggctccctgtggtggacctacacaagcagcatc
ttcttccgggtcatcttcgaagccgccttcatgtacgtcttctatgtcatgtacgacggc
ttctccatgcagcggctggtgaagtgcaacgcctggccttgtcccaacactgtggactgc
tttgtgtcccggcccacggagaagactgtcttcacagtgttcatgattgcagtgtctgga
atttgcatcctgctgaatgtcactgaattgtgttatttgctaattagatattgttctggg
aagtcaaaaaagccagtttaa

>gi568815585r:20122698_20323480|GENSCAN_predicted_peptide_5|261_aa
MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC
FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKESK
QNEMNELISDSGQNAITGFPS

>gi568815585r:20122698_20323480|GENSCAN_predicted_CDS_5|786_bp
atggattgggggacgctgcacactttcatcgggggtgtcaacaaacactccaccagcatc
gggaaggtgtggatcacagtcatctttattttccgagtcatgatcctcgtggtggctgcc
caggaagtgtggggtgacgagcaagaggacttcgtctgcaacacactgcaaccgggatgc
aaaaatgtgtgctatgaccactttttcccggtgtcccacatccggctgtgggccctccag
ctgatcttcgtctccaccccagcgctgctggtggccatgcatgtggcctactacaggcac
gaaaccactcgcaagttcaggcgaggagagaagaggaatgatttcaaagacatagaggac
attaaaaagcagaaggttcggatagaggggtcgctgtggtggacgtacaccagcagcatc
tttttccgaatcatctttgaagcagcctttatgtatgtgttttacttcctttacaatggg
taccacctgccctgggtgttgaaatgtgggattgacccctgccccaaccttgttgactgc
tttatttctaggccaacagagaagaccgtgtttaccatttttatgatttctgcgtctgtg
atttgcatgctgcttaacgtggcagagttgtgctacctgctgctgaaagtgtgttttagg
agatcaaagagagcacagacgcaaaaaaatcaccccaatcatgccctaaaggagagtaag
cagaatgaaatgaatgagctgatttcagatagtggtcaaaatgcaatcacaggtttccca
agctaa

>gi568815585r:20122698_20323480|GENSCAN_predicted_peptide_6|118_aa
MAVNAGDSASFKEDSTPLTAPVLTLVGGQGREVSPVCKTQDARDTGDRSSSPTGSAFWCL
HVLTKMCRQLLLITVVHAIVISISQVSRKPITQPIPCGSPGTYASAQVEGLSELKPAS

>gi568815585r:20122698_20323480|GENSCAN_predicted_CDS_6|357_bp
atggcagtaaacgcaggagactcagcaagttttaaggaggactcaactccactgactgct
cctgtcctgactttggtgggtggacagggaagggaggtcagccccgtttgcaaaacacag
gatgcccgtgacaccggagacaggtcttcttcaccgacaggaagtgccttctggtgcctg
cacgttttaactaagatgtgtcgccaattacttttaattactgtcgtccacgctattgtc
atcagcatttcacaagtttctcggaagcccatcacgcagcccataccctgcggttctccg
gggacttatgcatcggcccaagttgagggtttgtctgaactgaaacccgcatcctag

>gi568815585r:20122698_20323480|GENSCAN_predicted_peptide_7|176_aa
MTVTPHVGTGDPGSCVNGSYGEQGFRAAPTPANDVVSLYPSHSPHAESPAPDGVGRPADT
CRKAPNKIAMALFSSSPSQITVFGNMPGLRLPYHKTCILETGPGKKVNNNNNNNKKPSQK
LMAVKAAFVVNEWDAYQQSRGDFSQGTQRGKGKEAPDSGETQATPPQQGVQAEHQQ

>gi568815585r:20122698_20323480|GENSCAN_predicted_CDS_7|531_bp
atgacagtcacgccccacgtggggactggggaccctggaagctgcgtcaacggctcctat
ggggagcagggcttcagggcagcccccacacctgccaatgacgtcgtctctttgtacccg
agccactcacctcacgcagagagtccagcccctgatggggttggcagacctgcagacacc
tgcaggaaggcccccaacaaaatcgcaatggctctgttcagctcaagccctagccagata
actgtctttggtaatatgcctgggctaagactcccgtaccataagacttgtattctggaa
actggtccaggaaaaaaagtaaacaacaacaacaacaacaacaaaaagccatctcagaag
ctcatggccgtaaaggctgcatttgtagttaatgaatgggatgcttatcagcagagcagg
ggtgacttctcccaaggaacacagcgtggaaaggggaaagaggcccctgacagtggagag
acccaagccacaccacctcagcaaggggtccaagctgagcatcagcagtga

>gi568815585r:20122698_20323480|GENSCAN_predicted_peptide_8|472_aa
MAGCRSRALPGREAAKALREIYRSAGGGPGLQWQVRQLQLHLGEQILTVPSSPKSTGKLG
STAAVWPAVAPSRSSMKYAAPVEPPCCSWHNVSAIIPPSEENHPALLDNNSSLDHQSQGK
EPWDPPALLHHLKDQPWNQRPVSWEQSTLQWSTFAAVNSTQPDGAMLCGATGASASASAA
VPHPSRTPESSWQKQRFKFSTGLPSENKRYSVASPGHHCAFKGSCQRTLRTSQPPSCQHL
PEHLRLMLQGTSFPLIFDILPVLFLFLKAYPHPAASRVSSADPHTLRLPKYLLFFCTWPP
TLCSPPILSGQLLTPSAMHSPADEMLRKLYVCDRMSGCWSSSSCPDRSKMELVHSEQNKT
FINNFMELMSKKSILEPSLPDHGFQIKNCLHDDSRFFPPEGQCTACFPRGLKTQRKIVHR
HLHLLKGLSPGGSLPLHLSVNHATCGCHIYICPLHTSIRPVLTLTDSHWHQQ

>gi568815585r:20122698_20323480|GENSCAN_predicted_CDS_8|1419_bp
atggcgggctgcaggtcccgagccctgcccggcagggaggcagctaaggccctgcgagaa
atctaccgcagcgccgggggaggcccaggtctgcagtggcaggttcggcagctgcagctg
cacctgggagagcagatcctgactgttcccagctcccccaagagcacagggaagcttgga
tccacagctgcagtttggccagctgtagccccatccaggagctccatgaagtatgcagcc
ccagtcgagcctccgtgctgcagctggcataatgtcagtgccatcattcccccctctgaa
gagaatcacccagcgctcctggataacaatagcagtctggatcaccaaagccagggaaag
gaaccctgggacccaccagccctgttgcaccatttgaaagaccagccctggaaccagcga
cctgtgtcttgggagcagtccaccctccagtggtccacatttgcagcagtcaacagcacc
cagcctgatggagccatgctctgtggggccaccggggccagtgccagtgccagtgctgct
gttccccacccaagtagaacacccgagagcagctggcagaagcagcgcttcaaattttcc
accgggctcccttctgagaacaaacgctattcagtggcgagccccggacaccactgcgct
ttcaaaggcagctgccagaggacactcaggacttcacagccgccgagctgccagcacctt
cctgagcacctgcgactcatgctccagggaacctcattcccacttatctttgacattttg
cctgtgcttttcctcttcctcaaagcctatccacatcccgcagccagcagggtctcctct
gctgatcctcacacgctgagacttcccaagtacctgctgttcttctgcacttggccaccc
accttgtgttctccacccatcttgagcggtcagctcctgacaccatctgccatgcacagt
cctgctgatgagatgctaaggaaattatatgtgtgtgatagaatgtcaggatgctggtca
agctctagttgcccagacaggagcaagatggagctggttcacagtgagcagaacaagact
tttataaacaatttcatggagctcatgagtaagaagtccatccttgagccttcactgcca
gaccatggattccagatcaagaattgcttgcatgatgactcaagattcttccctccagag
ggccaatgcacagcatgtttccccagaggtctgaaaacacagagaaagatcgtccacaga
cacctccacctgcttaaaggtctgagtcctgggggctcactgcctctccatctaagtgtc
aaccacgcaacttgtggctgtcacatctacatctgtcccctgcacacgtccatcaggcca
gtgctgactcttactgactctcactggcaccagcagtga

>gi568815585r:20122698_20323480|GENSCAN_predicted_peptide_9|222_aa
MSEERLGKGLGSGEARKPRRSAAGGRVRPGQRRAGHQRVCGPTPGDRRPFAASERIKGRC
VGEGASARPRGPREAVPGRGGWPPASGERRLVPGCSERGAHGTRGGAAGGAGEKEKSQDR
LRKPAPALHPTAFTAIQADSPGARLLPFQRARPRAWGLVVNTLHQSPIQASNITKRGFWE
ALRSRRNRTSPRGMSPGPAPVNASRGNTPGRPETWLDPRLLR

>gi568815585r:20122698_20323480|GENSCAN_predicted_CDS_9|669_bp
atgagtgaggaacggctggggaaaggtctcggcagcggggaagcgcggaagcccaggaga
agtgcagcgggaggccgagtgaggccgggtcagcggcgggcaggccaccagagggtctgc
ggtcctacccccggagacagaaggccctttgcagcgtctgagcggataaagggacgatgt
gtgggtgagggcgccagtgcgaggccaagaggcccgcgggaggctgttccggggagaggc
gggtggcccccagcgagcggcgagcggcgcctggttccgggctgttctgagcgcggagcc
catgggacccgcggaggggctgctggtggagcaggagagaaagagaaaagccaagaccgg
ctgagaaaaccagcccctgccctgcaccccaccgcattcacggcgattcaggcagattcg
ccgggagcgcgcctgctgccgttccagagggcaagacccagggcgtggggcctggtggta
aacaccctccaccagagcccgatccaggcctccaacatcaccaagcgcggtttctgggaa
gcgctgcgcagccggcgcaatcggaccagcccccgcgggatgagccctgggcctgctccc
gtgaatgcttcccggggaaacacaccaggccgccctgaaacctggctggacccccgcctc
ctccgctaa