GENSCAN 1.0	Date run:  4-Nov-116	Time: 04:37:33

Sequence gi568815596f:222952831_223153340 : 200510 bp : 40.78% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1195   1318  124  0  1   80   78   111 0.641   7.75
 1.02 Intr +   6519   6615   97  1  1   64   59    57 0.375  -1.45
 1.03 Intr +   7100   7207  108  2  0   67   70    78 0.183   2.38
 1.04 Intr +  11744  11954  211  2  1   86   61    95 0.165   4.59
 1.05 Term +  12892  13344  453  0  0   41   49   198 0.892   5.37
 1.06 PlyA +  16415  16420    6                               1.05

 2.07 PlyA -  17054  17049    6                               1.05
 2.06 Term -  19757  19609  149  0  2   82   42   106 0.309   2.48
 2.05 Intr -  23771  23722   50  1  2   94   91    19 0.292   0.21
 2.04 Intr -  29944  29743  202  2  1   42  113   149 0.902  10.22
 2.03 Intr -  30347  30114  234  0  0  104   32   125 0.815   5.24
 2.02 Intr -  31365  31220  146  2  2   85   90    12 0.214   0.11
 2.01 Init -  36868  36033  836  1  2   40   12   357 0.054  17.51
 2.00 Prom -  45584  45545   40                              -2.35

 3.00 Prom +  57616  57655   40                              -3.65
 3.01 Sngl +  60450  61085  636  2  0   45   43   303 0.652  17.43
 3.02 PlyA +  61313  61318    6                               1.05

 4.00 Prom +  61482  61521   40                              -7.55
 4.01 Sngl +  61575  62231  657  2  0   49   41   238 0.824  11.12
 4.02 PlyA +  62289  62294    6                               1.05

 5.03 PlyA -  64735  64730    6                               1.05
 5.02 Term -  68693  68480  214  1  1   57   38   139 0.106   1.52
 5.01 Init -  79504  79182  323  1  2   53  110   157 0.559  10.20
 5.00 Prom -  79549  79510   40                              -5.45

 6.03 PlyA -  79714  79709    6                               1.05
 6.02 Term -  80876  80422  455  0  2   56   45   227 0.880   9.53
 6.01 Init -  81581  81545   37  2  1  106   62    25 0.380   1.93
 6.00 Prom -  87203  87164   40                              -5.55

 7.00 Prom +  95318  95357   40                              -5.45
 7.01 Init +  97961  98022   62  1  2   60  109    65 0.437   6.57
 7.02 Intr +  98835  98875   41  0  2   55   27    80 0.266  -4.45
 7.03 Intr +  99304  99444  141  2  0   81  111    88 0.597   9.80
 7.04 Term +  99978 100513  536  1  2   61   42   711 0.996  57.22
 7.05 PlyA + 102768 102773    6                               1.05

 8.04 PlyA - 103397 103392    6                               1.05
 8.03 Term - 113507 113461   47  0  2  128   42    25 0.115  -1.71
 8.02 Intr - 124016 123876  141  0  0  115   75    80 0.782   8.80
 8.01 Init - 134168 134102   67  2  1   84   38    54 0.018   1.29
 8.00 Prom - 134428 134389   40                              -7.75

 9.03 PlyA - 136743 136738    6                               1.05
 9.02 Term - 139195 139029  167  2  2   92   42   143 0.853   7.20
 9.01 Init - 144668 144638   31  2  1  101  107     6 0.685   3.81
 9.00 Prom - 145316 145277   40                              -4.25

10.08 PlyA - 146493 146488    6                               1.05
10.07 Term - 149022 148902  121  2  1  109   42    49 0.210  -0.63
10.06 Intr - 159622 159451  172  2  1   44   81   152 0.170   8.18
10.05 Intr - 165211 165005  207  2  0   91   30   141 0.581   6.73
10.04 Intr - 172228 172114  115  1  1   85   44   100 0.253   4.40
10.03 Intr - 185695 185583  113  2  2  -14   63   101 0.100  -3.42
10.02 Intr - 187296 187132  165  1  0  121   88    36 0.340   5.91
10.01 Intr - 190492 190377  116  0  2   58  103    88 0.649   6.47

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:222952831_223153340|GENSCAN_predicted_peptide_1|330_aa
MVVAVVLLPGILLGREAALSSFQCLWSGLLVGPAVIKLLVRSLWLHEDCLWAMRTTQLPP
PPSTDPEGLGIYSRSMVLEAQVFPDDVPGFPLHFVAFLQLVLFYPAIETDSLNSRTGNFC
KIGCGAIMLTPKGPPGSSSRSLADQRNLSRLWEQLESCLGAASQGQIHILWGRCARAPWS
KEAPTESCRGLWKGRDALAKAQEWAITSLSPSIVGQGPEGVGSSELLHFHSLHLGQTCPR
SPGLSRRATGAGISTGNKSTGKKVGNTKTVKRDPRGGARTMSPYPARVCITSKGQGQRLH
VHSPHTAEACLNSRSFIPLPAPMGRSSSFV

>gi568815596f:222952831_223153340|GENSCAN_predicted_CDS_1|993_bp
atggtggtcgcagtggtgctgcttccagggattctcctgggtcgagaggctgcactgtca
tctttccagtgtctctggagtggcttgctggttggtccagctgttatcaaattgctagtg
aggtcactatggcttcatgaggactgcctttgggctatgagaaccactcagctcccacct
ccaccctccacagatccagaaggccttggaatatattctagatccatggttcttgaagcc
caggtgttccctgatgacgtccctggctttcccctacatttcgtggcctttcttcagctt
gtcctcttctatccagccattgaaacagattctctaaactccaggacaggaaatttctgc
aagataggctgtggagcaataatgctaactcctaaaggaccccctgggtcatcctcaaga
tctcttgcagaccagaggaacctttccagactctgggagcagcttgagtcttgtctcgga
gctgcttcacaaggccagatacacatcctgtggggccgctgtgcccgagcaccatggtca
aaggaagctcccactgaatcctgcagggggctgtggaagggaagagatgctctagccaag
gcccaggagtgggctattacatccctgtccccatccattgtgggtcaagggcctgagggg
gttggcagctcagagcttctccatttccactccctgcacctgggccaaacctgccccagg
agccctggcctctcaagaagagccacaggtgctggcataagcacaggaaacaaaagtaca
ggaaagaaggtgggaaacacaaaaacagtaaaaagggacccaaggggaggagcacggaca
atgtccccttaccctgctagggtgtgcattacaagtaaaggtcaaggccaaagacttcat
gtgcattccccgcacactgctgaagcatgtttgaattctcgttctttcattccactgcca
gctcccatgggcagatccagctcctttgtgtag

>gi568815596f:222952831_223153340|GENSCAN_predicted_peptide_2|538_aa
MSETFEADSKVPTQTWRSRRKKWFCGLGQGSLCCVQPRDLVPCIPAAPAVAERRQCRAQA
TASEGASLKSLHLPCGVEPPSTQKSRIGVWEPSPKFQRMYGNAWMLRQKFAAGAGPSWRT
SARTVQKGNVGSEPPHRVPTGASHSGAVRRGPPSSRPQNGRSTDSLHCPPGKATGTQRQP
MKAAKREAIPCKATGVKLPNTMGTHHLYKCDLEVKHGVKGDHFGALRFDCPAGFQTCMGP
VVPLFWPISPIWNGYIYPMPVSHCIWEVTNLLLILQAHRSDHRIDLCYSKCGAQTRSNSS
TCDLERNAESQPGMVAHACNTSTLGGRGYKGGSHGHEQNLYAYLHSDDQAVEWLAEKHNA
ESSGLQKVRGTHQLQREGCQWRREVGKEWVAFSLPHRNGSKAMMQEEGQGGAVKGAGRGR
GRWGTVVEALEKGIWEDSQMGVGEGTGFQRKWFWLRLAESNNEARNTEDTVGSNRHVKVS
SLEVQTVVLGTSRPQDHCLCCAHCLEWSSPKTPVAHTINPSGLIEMSLAPRGLRCHAI

>gi568815596f:222952831_223153340|GENSCAN_predicted_CDS_2|1617_bp
atgtcagagacctttgaggcagactcaaaggtcccaacacagacttggaggtctaggagg
aaaaagtggttttgtggtctgggccaaggctccctgtgctgtgtgcagcctagggacttg
gtgccctgcatcccagctgctccagcagttgctgaaaggaggcaatgtagagctcaggcc
acagcttcagagggtgcaagcctcaagtcattgcaccttccatgtggtgttgagcctccc
agtacacagaagtcaagaattggggtttgggaaccatcacctaaatttcagaggatgtat
ggaaatgcctggatgctcaggcagaagtttgctgcaggggcagggccctcatggagaacc
tctgctaggacagtgcagaagggaaatgtggggtcagagcccccacacagagtccctact
ggggcatcacatagtggagctgtgagaagagggccaccatcctccagaccccagaatggt
agatccactgacagcttgcactgtccacctggaaaagccacaggcactcaacgccagccc
atgaaagcagccaagagggaggctataccctgcaaagccacaggggtgaagctgcccaat
accatgggaactcaccacttgtataagtgtgacctcgaggtgaaacatggagtcaaagga
gatcattttggagctttaagatttgactgccccgctggatttcagacttgcatggggcct
gtagtacctttgttttggccaatttctcccatttggaatggctatatttacccaatgcct
gtatcccattgtatctgggaagtaactaacttgcttttgattttacaggctcataggtca
gatcatcgtatagatctttgctactcaaaatgtggtgcccagaccagaagcaacagcagc
acttgtgaccttgaaagaaatgcagaatctcagccaggcatggtggctcatgcctgtaat
accagcactttgggaggccgaggatacaaaggtgggtcacatggtcacgagcagaacctc
tatgcatatctgcattcagatgatcaagctgtagaatggctagccgaaaaacacaatgct
gaaagttcagggttgcagaaagtcagaggcacacatcagcttcaaagagaaggctgtcaa
tggagacgggaagtggggaaggagtgggtagccttctctctgccacacagaaatggctcc
aaggctatgatgcaagaggaggggcaaggtggagctgttaagggagcaggtagagggaga
ggcaggtgggggaccgtggttgaagcactagaaaagggcatctgggaagactcgcaaatg
ggagtgggggaagggacaggcttccagaggaagtggttttggttgaggctggctgagagc
aacaatgaggctaggaacaccgaggacaccgtgggaagcaacagacatgttaaggtcagc
agtcttgaagtacagacagttgttcttggcacctcccgaccccaggaccattgcctttgc
tgtgcccactgcctagaatggtcttcccctaaaactcccgtggctcacaccatcaatcct
tcaggtcttattgaaatgtcactggctccaagaggtctccgatgccacgctatttaa

>gi568815596f:222952831_223153340|GENSCAN_predicted_peptide_3|211_aa
MKPEEKFREKRVKRNEQTLQEIWDYVKRPNLCLIGVPESDRENGTKSENTLQDIIQENFP
NLARQANIQIQEIQRTPQRYSLRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTHKGKPI
RLTADLLAESLQARREWGPIFNILKEKNFQPRISYPAKLHFISEGKIKSFTDKQMLRDFV
TTRPALKELLKEALNLERNNQYQPLQKHAKL

>gi568815596f:222952831_223153340|GENSCAN_predicted_CDS_3|636_bp
atgaagccagaagagaagtttagagaaaaaagagtaaaaagaaatgaacaaaccctccaa
gaaatatgggactatgtgaaaagaccaaatctatgtctgattggtgtacctgaaagtgac
cgggagaatggaactaagtcggaaaacactctgcaggatattatccaggagaacttcccc
aatctagcaaggcaggccaacattcaaattcaggaaatacagagaacaccgcaaaggtac
tccttgagaagagcaactccaagacacataattgtcagattcaccaaagtcgaaatgaag
gaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaagggaagcccatc
agactaacagcagatctcttggcagaaagtctacaagccagaagagagtgggggcccata
ttcaacattcttaaagaaaagaattttcaacctagaatttcatatccagccaaactacac
ttcataagtgaaggaaaaataaaatcctttacagacaagcaaatgctgagagattttgtc
accaccaggcctgccctaaaagagctcctgaaggaagcactaaacttggaaaggaacaac
cagtaccagccactgcaaaaacatgccaaactgtaa

>gi568815596f:222952831_223153340|GENSCAN_predicted_peptide_4|218_aa
MGDFNTPLSTLDRSMRQKVNKDIQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHRTYS
KINHIVGSKALLSKCKRKEIITNYLSDHSAIKLELRIKKLTQNCSTIWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK
ELEKQEQTHSKANRRQEITKIRAELKEIETQKTLQKNQ

>gi568815596f:222952831_223153340|GENSCAN_predicted_CDS_4|657_bp
atgggagactttaataccccactgtcaacattagacagatcaatgagacagaaagttaac
aaggatatccaggaattgaactcagctctgcaccaagcagacctaatagacatctacaga
actctccaccccaaatcaacagaatatacattcttctcagcaccacatcgcacttattcc
aaaattaaccacatagttggaagtaaagcactcctcagcaaatgtaaaagaaaagaaatt
ataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaaactc
actcaaaactgctcaactatatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacaca
acataccagaatctctgggacacatttaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacgtcacaattaaaa
gaactagagaagcaagagcaaacacattcaaaagctaacagaaggcaagaaataactaag
atcagagcagaactgaaggagatagagacacaaaaaacccttcaaaaaaatcaatga

>gi568815596f:222952831_223153340|GENSCAN_predicted_peptide_5|178_aa
MRTARERPTLMMQLLLTGSLLRHVEMMLTTIRDLSGDTEPNRISTQGRTFCNWTEQSDDA
VECHFPQTGATLVVLTMKIQRCNIKKHVLLNRQKQTQRLFNLALSMYSSLGHRVPDITQR
PHLNVNNSCECRIFKGNEQSPLLRTESSYFMYEGFKWDRPVCHLPHAADISSSVKQGK

>gi568815596f:222952831_223153340|GENSCAN_predicted_CDS_5|537_bp
atgagaacagcacgcgaaagacccaccctcatgatgcaattacttctcacagggtccctc
ctacgacatgtggaaatgatgttaactacaattcgagatttgagtggcgacacagagcca
aaccgtatcagcacccaaggaaggacattctgtaactggacagagcagtcagatgatgca
gttgagtgtcattttccacagactggtgctaccttagtggtgcttacaatgaagatacag
agatgcaacataaagaagcatgttttactcaacagacaaaagcaaactcagagattattt
aatctagccctttccatgtacagtagcctagggcaccgtgtccctgacatcacacagagg
ccacatttaaatgtaaataacagctgtgaatgcaggattttcaaaggcaatgagcagagt
ccgctcctcagaacagagtcctcttatttcatgtacgagggcttcaaatgggaccgtcca
gtgtgtcacttgcctcatgctgctgacatttcctcctctgtaaaacaagggaaataa

>gi568815596f:222952831_223153340|GENSCAN_predicted_peptide_6|163_aa
MAMEKRKHLCTAVYPGAGWFGLGFKENVHELTLRPHWGTLKVAEKERKNVKGNTEVHSLI
EQRSWKDAEISQWCVSLGTRAQQHAVVTHPTWPRKLLNDDVPLSCNFPGPQTVHPGTLSL
PPAPATPPPFFYLQDLIQGPGGPCVTPHNHGSSFLGLSSSSAL

>gi568815596f:222952831_223153340|GENSCAN_predicted_CDS_6|492_bp
atggctatggagaaaaggaaacacttatgcacagctgtgtatcctggagctgggtggttt
ggcttagggttcaaagaaaatgtccatgaactcaccttgaggccgcactggggcaccctg
aaagtagcagaaaaagaaaggaagaatgtcaaaggaaacactgaggttcacagcctgatt
gaacagagaagctggaaggatgctgagatatcccagtggtgtgtttccttgggtacaagg
gcccagcagcatgctgtggtaactcaccccacatggcccagaaagctcttaaatgatgat
gttcctctgagctgcaattttcctggtccccaaactgttcacccaggaacactgtctctg
cccccagcccctgccacacctccaccttttttctacctgcaagacctaattcaagggcca
ggaggaccttgtgtcacccctcacaatcatggctcctctttccttggcctgtcgtcctcc
tctgctctttga

>gi568815596f:222952831_223153340|GENSCAN_predicted_peptide_7|259_aa
MLEWSMVGTSSASWGFMDEHRHNDFTDEECEVRREHVTMHFLTIYPNCSSGVVRAQSRTE
QKNPLGLDDLGIQNLGQTVSLAPAVEAASMLKMEPLNSTHPGTAASSSPLESRAAGGGSG
NGNEYFYILVVMSFYGIFLIGIMLGYMKSKRREKKSSLLLLYKDEERLWGEAMKPLPVVS
GLRSVQVPLMLNMLQESVAPALSCTLCSMEGDSVSSESSSPDVHLTIQEEGADDELEETS
ETPLNESSEGSSENIHQNS

>gi568815596f:222952831_223153340|GENSCAN_predicted_CDS_7|780_bp
atgctggagtggtcgatggttggtacctccagtgccagctggggatttatggatgaacac
aggcacaacgattttacagacgaggaatgtgaggtgcggagagagcacgtgacgatgcac
ttcttgactatatatcccaactgcagcagcggagttgtcagagcgcagagccggacagag
cagaagaaccctcttggactggacgatttgggaattcaaaacttgggacaaactgtcagc
cttgcccctgctgtggaggcagcctcaatgctgaaaatggagcctctgaacagcacgcac
cccggcaccgccgcctccagcagccccctggagtcccgtgcggccggcggcggcagcggc
aatggcaacgagtacttctacattctggttgtcatgtccttctacggcattttcttgatc
ggaatcatgctgggctacatgaaatccaagaggcgggagaagaagtccagcctcctgctg
ctgtacaaagacgaggagcggctctggggggaggccatgaagccgctgcctgtggtgtcg
ggcctgaggtcggtgcaggtgcccctgatgctgaacatgctgcaggagagcgtggcgccc
gcgctgtcctgcaccctctgttccatggaaggggacagcgtgagctccgagtcctcctcc
ccggacgtgcacctcaccattcaggaggagggggcagacgatgagctggaggagacctcg
gagacgcccctcaacgagagcagcgaagggtcctcggagaacatccatcagaattcctag

>gi568815596f:222952831_223153340|GENSCAN_predicted_peptide_8|84_aa
MRNQNHIVVCLEHSSRSEDICTGRNLIPSFGRVTCIDRNVSRHARHCVKNDSFGVTCGLA
GILSLHHRKGPTQSFTPQSPGYFS

>gi568815596f:222952831_223153340|GENSCAN_predicted_CDS_8|255_bp
atgaggaatcagaaccatatcgtggtgtgcctggaacatagcagccgctcagaagacatt
tgtacaggaaggaatctaattcccagctttggtcgtgtgacttgcattgaccggaatgtg
agcagacatgccagacactgtgttaaaaatgactctttcggtgtgacttgtggtttggca
ggcatcttgagcctccaccataggaagggacccacccagtccttcacccctcagagcccc
ggttacttctcttga

>gi568815596f:222952831_223153340|GENSCAN_predicted_peptide_9|65_aa
MNMSQATRTGELATQVGGNPDGDLELMRRTGSHQVVGDKKSTRTPWKTGSHQIAEDEESM
RTPFA

>gi568815596f:222952831_223153340|GENSCAN_predicted_CDS_9|198_bp
atgaacatgtctcaagccacccgcactggagagctggctacccaggtgggagggaaccca
gatggggatctagagcttatgaggaggacagggagtcaccaggtagttggagacaagaag
tctacaagaacaccttggaagacagggagtcaccagatagctgaagacgaggagtctatg
agaacaccttttgcataa

>gi568815596f:222952831_223153340|GENSCAN_predicted_peptide_10|336_aa
XLLNSWNYRRVQEVLPHNLKVLTNHRKHIHRPHCQPWATGLSPRVSMPRALLAETSVWPV
GLTSYNTINSPLLTSLTFSRSHSITGIHCLRMKTVCSSIKGREREKETQRQRKDRKNINA
GSVRGTLWEGGSVLPLPQEQPTSNGIGREKRISPLTTKWNNEGPSQLLRSGSTPPSKHTH
GNEVLPASQIRSQCGGISCLDIFFHNGPEASPDWELDLLLLPVSPSGAQCLVQSRFSATG
LIALQEEETPESSLFVCTGKRPWENTERRHHLKPRREALPETDPAGTLVLDFQPPKWALP
LPHQAYGLGRALPKPKPISTPASNRPQGLFLGEILV

>gi568815596f:222952831_223153340|GENSCAN_predicted_CDS_10|1011_bp
nngctcctgaatagctggaattacagacgcgtgcaagaagttttgccacataatttaaag
gtgttgacaaatcaccggaaacatattcatagaccacattgccaaccatgggctacaggc
ttgtcacccagggtatccatgccaagggcgctactggcagaaacatcagtgtggccggtg
ggcttaacctcttacaataccattaactctccattgctcaccagccttacgttttcacgc
agccactctatcactggcattcattgcctccgaatgaaaacagtatgttcctcaataaag
ggacgagaaagagagaaagaaacacagagacagagaaaggacagaaagaacattaatgca
ggctctgttagggggactttgtgggaaggaggctcagtcctgcccttgccccaggagcag
cccacatctaatggtattggaagagagaagaggataagccctcttaccactaagtggaat
aatgaagggccatctcagctccttcgctctggctccacacctccttcaaagcacacccat
ggtaacgaagtcctccctgcatcacaaatcagatcacagtgtggaggaatttcctgctta
gacatcttcttccataatggaccggaagcctctccagactgggaactggatctcctcctt
cttcctgtgtctccatctggagcacagtgcctggtacaaagcaggttctctgcaactgga
ctgatagccttacaagaagaagagacaccagagagctctctctttgtgtgcacagggaaa
agaccatgggagaacacagagagaaggcatcatctgaagccgaggagagaggccttgcca
gaaacggaccctgctggcaccttggtcttggactttcagcctccaaaatgggctcttccc
ctcccccaccaagcatatggtctgggcagggctctccccaagcctaagccaatcagcaca
cctgcatcgaaccggccacagggactgtttctgggagagatcctggtataa