Result of FASTA (ccds) for pF1KB7083
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7083, 126 aa
  1>>>pF1KB7083 126 - 126 aa - 126 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1949+/-0.000721; mu= 12.6228+/- 0.044
 mean_var=73.2712+/-14.195, 0's: 0 Z-trim(110.2): 25  B-trim: 266 in 1/52
 Lambda= 0.149833
 statistics sampled from 11402 (11427) to 11402 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.723), E-opt: 0.2 (0.351), width:  16
 Scan time:  1.130

The best scores are:                                      opt bits E(32554)
CCDS4587.1 HIST1H2BD gene_id:3017|Hs108|chr6       ( 126)  787 178.3 1.1e-45
CCDS4633.1 HIST1H2BN gene_id:8341|Hs108|chr6       ( 126)  784 177.6 1.8e-45
CCDS4603.1 HIST1H2BI gene_id:8346|Hs108|chr6       ( 126)  782 177.2 2.4e-45
CCDS4592.1 HIST1H2BF gene_id:8343|Hs108|chr6       ( 126)  782 177.2 2.4e-45
CCDS4584.1 HIST1H2BC gene_id:8347|Hs108|chr6       ( 126)  782 177.2 2.4e-45
CCDS4594.1 HIST1H2BG gene_id:8339|Hs108|chr6       ( 126)  782 177.2 2.4e-45
CCDS4588.1 HIST1H2BE gene_id:8344|Hs108|chr6       ( 126)  782 177.2 2.4e-45
CCDS4575.1 HIST1H2BB gene_id:3018|Hs108|chr6       ( 126)  782 177.2 2.4e-45
CCDS936.1 HIST2H2BE gene_id:8349|Hs108|chr1        ( 126)  781 177.0 2.8e-45
CCDS4621.1 HIST1H2BK gene_id:85236|Hs108|chr6      ( 126)  778 176.3 4.3e-45
CCDS4601.1 HIST1H2BH gene_id:8345|Hs108|chr6       ( 126)  778 176.3 4.3e-45
CCDS4618.1 HIST1H2BJ gene_id:8970|Hs108|chr6       ( 126)  777 176.1   5e-45
CCDS4640.1 HIST1H2BO gene_id:8348|Hs108|chr6       ( 126)  777 176.1   5e-45
CCDS30846.1 HIST2H2BF gene_id:440689|Hs108|chr1    ( 126)  773 175.2 9.2e-45
CCDS53359.1 HIST2H2BF gene_id:440689|Hs108|chr1    ( 134)  773 175.3 9.6e-45
CCDS4629.1 HIST1H2BM gene_id:8342|Hs108|chr6       ( 126)  771 174.8 1.2e-44
CCDS1574.1 HIST3H2BB gene_id:128312|Hs108|chr1     ( 126)  765 173.5   3e-44
CCDS4625.1 HIST1H2BL gene_id:8340|Hs108|chr6       ( 126)  760 172.4 6.4e-44
CCDS4563.1 HIST1H2BA gene_id:255626|Hs108|chr6     ( 127)  667 152.3 7.3e-38
CCDS55468.1 H2BFM gene_id:286436|Hs108|chrX        ( 154)  322 77.8 2.4e-15
CCDS35362.1 H2BFWT gene_id:158983|Hs108|chrX       ( 175)  297 72.4 1.1e-13


>>CCDS4587.1 HIST1H2BD gene_id:3017|Hs108|chr6            (126 aa)
 initn: 787 init1: 787 opt: 787  Z-score: 933.5  bits: 178.3 E(32554): 1.1e-45
Smith-Waterman score: 787; 100.0% identity (100.0% similar) in 126 aa overlap (1-126:1-126)

               10        20        30        40        50        60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
               70        80        90       100       110       120

             
pF1KB7 KYTSSK
       ::::::
CCDS45 KYTSSK
             

>>CCDS4633.1 HIST1H2BN gene_id:8341|Hs108|chr6            (126 aa)
 initn: 784 init1: 784 opt: 784  Z-score: 930.0  bits: 177.6 E(32554): 1.8e-45
Smith-Waterman score: 784; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)

               10        20        30        40        50        60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
       ::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MPEPSKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
               70        80        90       100       110       120

             
pF1KB7 KYTSSK
       ::::::
CCDS46 KYTSSK
             

>>CCDS4603.1 HIST1H2BI gene_id:8346|Hs108|chr6            (126 aa)
 initn: 782 init1: 782 opt: 782  Z-score: 927.6  bits: 177.2 E(32554): 2.4e-45
Smith-Waterman score: 782; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)

               10        20        30        40        50        60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
       ::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
               70        80        90       100       110       120

             
pF1KB7 KYTSSK
       ::::::
CCDS46 KYTSSK
             

>>CCDS4592.1 HIST1H2BF gene_id:8343|Hs108|chr6            (126 aa)
 initn: 782 init1: 782 opt: 782  Z-score: 927.6  bits: 177.2 E(32554): 2.4e-45
Smith-Waterman score: 782; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)

               10        20        30        40        50        60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
       ::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
               70        80        90       100       110       120

             
pF1KB7 KYTSSK
       ::::::
CCDS45 KYTSSK
             

>>CCDS4584.1 HIST1H2BC gene_id:8347|Hs108|chr6            (126 aa)
 initn: 782 init1: 782 opt: 782  Z-score: 927.6  bits: 177.2 E(32554): 2.4e-45
Smith-Waterman score: 782; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)

               10        20        30        40        50        60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
       ::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
               70        80        90       100       110       120

             
pF1KB7 KYTSSK
       ::::::
CCDS45 KYTSSK
             

>>CCDS4594.1 HIST1H2BG gene_id:8339|Hs108|chr6            (126 aa)
 initn: 782 init1: 782 opt: 782  Z-score: 927.6  bits: 177.2 E(32554): 2.4e-45
Smith-Waterman score: 782; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)

               10        20        30        40        50        60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
       ::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
               70        80        90       100       110       120

             
pF1KB7 KYTSSK
       ::::::
CCDS45 KYTSSK
             

>>CCDS4588.1 HIST1H2BE gene_id:8344|Hs108|chr6            (126 aa)
 initn: 782 init1: 782 opt: 782  Z-score: 927.6  bits: 177.2 E(32554): 2.4e-45
Smith-Waterman score: 782; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)

               10        20        30        40        50        60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
       ::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
               70        80        90       100       110       120

             
pF1KB7 KYTSSK
       ::::::
CCDS45 KYTSSK
             

>>CCDS4575.1 HIST1H2BB gene_id:3018|Hs108|chr6            (126 aa)
 initn: 782 init1: 782 opt: 782  Z-score: 927.6  bits: 177.2 E(32554): 2.4e-45
Smith-Waterman score: 782; 97.6% identity (100.0% similar) in 126 aa overlap (1-126:1-126)

               10        20        30        40        50        60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
       ::::.:::::::::::::.::::::::::::::::::::.::::::::::::::::::::
CCDS45 MPEPSKSAPAPKKGSKKAITKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
               70        80        90       100       110       120

             
pF1KB7 KYTSSK
       ::::::
CCDS45 KYTSSK
             

>>CCDS936.1 HIST2H2BE gene_id:8349|Hs108|chr1             (126 aa)
 initn: 781 init1: 781 opt: 781  Z-score: 926.5  bits: 177.0 E(32554): 2.8e-45
Smith-Waterman score: 781; 98.4% identity (100.0% similar) in 126 aa overlap (1-126:1-126)

               10        20        30        40        50        60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
       ::::.::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS93 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
               70        80        90       100       110       120

             
pF1KB7 KYTSSK
       ::::::
CCDS93 KYTSSK
             

>>CCDS4621.1 HIST1H2BK gene_id:85236|Hs108|chr6           (126 aa)
 initn: 824 init1: 778 opt: 778  Z-score: 923.0  bits: 176.3 E(32554): 4.3e-45
Smith-Waterman score: 778; 98.4% identity (100.0% similar) in 126 aa overlap (1-126:1-126)

               10        20        30        40        50        60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
       ::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
               70        80        90       100       110       120

             
pF1KB7 KYTSSK
       ::::.:
CCDS46 KYTSAK
             




126 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 04:29:12 2016 done: Fri Nov  4 04:29:12 2016
 Total Scan time:  1.130 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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