GENSCAN 1.0	Date run:  4-Nov-116	Time: 04:26:54

Sequence gi568815591r:124646528_124864976 : 218449 bp : 36.49% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  17473  17661  189  0  0   45   54   202 0.508  11.56
 1.02 Intr +  34969  34987   19  0  1  132   89    18 0.054   1.57
 1.03 Term +  42169  42395  227  2  2   98   41   164 0.682   8.66
 1.04 PlyA +  44048  44053    6                               1.05

 2.00 Prom +  61980  62019   40                              -4.55
 2.01 Init +  70678  70722   45  0  0   53  100    49 0.241   3.34
 2.02 Intr +  83019  83175  157  2  1   58  119   110 0.079   9.76
 2.03 Term +  84773  84966  194  0  2   63   44   165 0.655   6.20
 2.04 PlyA +  87396  87401    6                               1.05

 3.03 PlyA -  87770  87765    6                               1.05
 3.02 Term - 100816  99998  819  1  0  122   49   592 0.663  50.82
 3.01 Init - 118449 117427 1023  0  0   60   80   906 0.002  78.78
 3.00 Prom - 121455 121416   40                              -5.85

 4.00 Prom + 133164 133203   40                              -4.85
 4.01 Init + 141901 141990   90  0  0   83   86   107 0.952  10.54
 4.02 Intr + 144377 144459   83  1  2   53   63   140 0.435   5.52
 4.03 Term + 145070 145121   52  2  1   65   54    72 0.345  -2.58
 4.04 PlyA + 145642 145647    6                               1.05

 5.09 PlyA - 148151 148146    6                               1.05
 5.08 Term - 151507 151446   62  2  2  100   32    34 0.038  -4.01
 5.07 Intr - 166171 166041  131  0  2   71   78   121 0.142   8.82
 5.06 Intr - 172536 172472   65  0  2   53   64    63 0.016  -3.00
 5.05 Intr - 180778 180687   92  2  2   91   84    68 0.521   5.49
 5.04 Intr - 200471 200415   57  0  0  126   71    36 0.560   3.64
 5.03 Intr - 205424 205345   80  1  2   72   80    64 0.685   2.28
 5.02 Intr - 206611 206445  167  1  2   81   80    70 0.023   3.34
 5.01 Intr - 217113 216823  291  0  0   69   83   116 0.372   5.61

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  82977  83175  199  2  1   72  119   115 0.853  12.12
S.002 Sngl - 118449 117337 1113  0  0   60   37   983 0.995  84.95


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:124646528_124864976|GENSCAN_predicted_peptide_1|144_aa
MTNKNGKESDTLHFSKAASLSVAQSFVILREHEQEGSPEVGVETGKSDRGETSSNVIVAK
ILVATQHEDARIHKSRNQEVKVEVVPLTITLSDPLANIFLPVPTTLCSAGLEVLSPEDGM
LPPEDTTIPLNWKLRLPPLGSSYL

>gi568815591r:124646528_124864976|GENSCAN_predicted_CDS_1|435_bp
atgacaaacaagaacggcaaggaaagtgacaccctccacttcagcaaagcagcttctctc
agtgtggcccagtcctttgtaattttaagggagcatgaacaagaaggaagcccagaggtg
ggagttgagactggtaaaagcgacagaggtgaaacatcatcgaatgtcattgtggctaaa
atccttgtggctactcaacatgaagacgccaggattcacaagtccagaaatcaagaggtg
aaagtggaagtggtaccactcaccattacccttagtgacccgctagcaaacatttttctt
cctgttcccacgacattatgttctgctggcctggaggtcttaagtccagaggatggaatg
ctgccaccagaagacacaacaattccattaaactggaagttaagattgccgcctttgggc
tcctcctacctctaa

>gi568815591r:124646528_124864976|GENSCAN_predicted_peptide_2|131_aa
MDTYRGTTDTGAYLKTRMKFGAVTQIGGPPLGDQPLSSCSLLREKDPPTTSGPQTHQPKE
HLTNFKSGACYKCQKSGHQAKECLQPRIPPKPRPICAGPHWKSDFSTHLAATPRAPGILA
QGSLTPSQILA

>gi568815591r:124646528_124864976|GENSCAN_predicted_CDS_2|396_bp
atggacacatatagaggaacaacagacactggggcctacctgaagacacgcatgaaattt
ggtgccgtgactcagatcgggggacctcccttgggagatcaacccctgtcctcctgttct
ttgctccgtgaaaaagatccacctacaacctcaggtcctcagacccaccagcccaaggaa
catctcaccaattttaaatccggagcttgctacaagtgccagaaatctggccaccaggcc
aaggaatgcctgcagcccaggattcctcctaagccgcgtcccatctgtgcgggaccccac
tggaaatcggacttttcaactcacctggcagccactcccagagcccctggaattctggcc
caaggctctctgactccttcccagatcttggcttag

>gi568815591r:124646528_124864976|GENSCAN_predicted_peptide_3|613_aa
MRAPGALLARMSRLLLLLLLKVSASSALGVAPASRNETCLGESCAPTVIQRRGRDAWGPG
NSARDVLRARAPREEQGAAFLAGPSWDLPAAPGRDPAAGRGAEASAAGPPGPPTRPPGPW
RWKGARGQEPSETLGRGNPTALQLFLQISEEEEKGPRGAGISGRSQEQSVKTVPGASDLF
YWPRRAGKLQGSHHKPLSKTANGLAGHEGWTIALPGRALAQNGSLGEGIHEPGGPRRGNS
TNRRVRLKNPFYPLTQESYGAYAVMCLSVVIFGTGIIGNLAVMCIVCHNYYMRSISNSLL
ANLAFWDFLIIFFCLPLVIFHELTKKWLLEDFSCKIVPYIEVASLGVTTFTLCALCIDRF
RAATNVQMYYEMIENCSSTTAKLAVIWVGALLLALPEVVLRQLSKEDLGFSGRAPAERCI
IKISPDLPDTIYVLALTYDSARLWWYFGCYFCLPTLFTITCSLVTARKIRKAEKACTRGN
KRQIQLESQMNCTVVALTILYGFCIIPENICNIVTAYMATGVSQQTMDLLNIISQFLLFF
KSCVTPVLLFCLCKPFSRAFMECCCCCCEECIQKSSTVTSDDNDNEYTTELELSPFSTIR
REMSTFASVGTHC

>gi568815591r:124646528_124864976|GENSCAN_predicted_CDS_3|1842_bp
atgcgagccccgggcgcgcttctcgcccgcatgtcgcggctactgcttctgctactgctc
aaggtgtctgcctcttctgccctcggggtcgcccctgcgtccagaaacgaaacttgtctg
ggggagagctgtgcacctacagtgatccagcgccgcggcagggacgcctggggaccggga
aattctgcaagagacgttctgcgagcccgagcacccagggaggagcagggggcagcgttt
cttgcgggaccctcctgggacctgccggcggccccgggccgtgacccggctgcaggcaga
ggggcggaggcgtcggcagccggacccccgggacctccaaccaggccacctggcccctgg
aggtggaaaggtgctcggggtcaggagccttctgaaactttggggagagggaaccccacg
gccctccagctcttccttcagatctcagaggaggaagagaagggtcccagaggcgctggc
atttccgggcgtagccaggagcagagtgtgaagacagtccccggagccagcgatcttttt
tactggccaaggagagccgggaaactccagggttcccaccacaagcccctgtccaagacg
gccaatggactggcggggcacgaagggtggacaattgcactcccgggccgggcgctggcc
cagaatggatccttgggtgaaggaatccatgagcctgggggtccccgccggggaaacagc
acgaaccggcgtgtgagactgaagaaccccttctacccgctgacccaggagtcctatgga
gcctacgcggtcatgtgtctgtccgtggtgatcttcgggaccggcatcattggcaacctg
gcggtgatgtgcatcgtgtgccacaactactacatgcggagcatctccaactccctcttg
gccaacctggccttctgggactttctcatcatcttcttctgccttccgctggtcatcttc
cacgagctgaccaagaagtggctgctggaggacttctcctgcaagatcgtgccctatata
gaggtcgcttctctgggagtcaccactttcaccttatgtgctctgtgcatagaccgcttc
cgtgctgccaccaacgtacagatgtactacgaaatgatcgaaaactgttcctcaacaact
gccaaacttgctgttatatgggtgggagctctattgttagcacttccagaagttgttctc
cgccagctgagcaaggaggatttggggtttagtggccgagctccggcagaaaggtgcatt
attaagatctctcctgatttaccagacaccatctatgttctagccctcacctacgacagt
gcgagactgtggtggtattttggctgttacttttgtttgcccacgcttttcaccatcacc
tgctctctagtgactgcgaggaaaatccgcaaagcagagaaagcctgtacccgagggaat
aaacggcagattcaactagagagtcagatgaactgtacagtagtggcactgaccatttta
tatggattttgcattattcctgaaaatatctgcaacattgttactgcctacatggctaca
ggggtttcacagcagacaatggacctccttaatatcatcagccagttccttttgttcttt
aagtcctgtgtcaccccagtcctccttttctgtctctgcaaacccttcagtcgggccttc
atggagtgctgctgctgttgctgtgaggaatgcattcagaagtcttcaacggtgaccagt
gatgacaatgacaacgagtacaccacggaactcgaactctcgcctttcagtaccatacgc
cgtgaaatgtccacttttgcttctgtcggaactcattgctga

>gi568815591r:124646528_124864976|GENSCAN_predicted_peptide_4|74_aa
MIIVSWAPDKVRAPQMVSAKGYIEISAYSQDWGGRRKEIKPKTLIQLGPQSTKRSEQSRV
EDPEFPVLRHLFLE

>gi568815591r:124646528_124864976|GENSCAN_predicted_CDS_4|225_bp
atgatcattgtgtcctgggcaccagataaggtccgagctccccagatggtgagcgccaag
ggttacattgagatctccgcttattcccaggactggggtggaaggaggaaggagataaag
cctaaaaccttaatacagcttggaccccagagtactaaacgatcggagcaaagtcgggta
gaagaccctgaatttcctgttttacggcatttatttttggaatga

>gi568815591r:124646528_124864976|GENSCAN_predicted_peptide_5|314_aa
IQVYKKETQGITSSGFASLTFEGTLGAPIIPRTSSKYFNFTTEDHKMVEALRVWASTHMS
PSWTLLKLCDVQPMQYFDLTCQLLGKAEVDGASFLLKVGSFLRIYSLHTKLQSMNSENQT
MLSLEFHLHGGTSYGRGIRVLPESNSDVDQLKKDLESANLTANQHSDVICQSEPDDSFPS
SGSVSLYEVERCQQLSATTLGIVPLQYVFVMTFTLDDGTGVLEAYLMDSAAASSKPLLDR
EHTYGQVQELGYLGDILQTLKAQMNTGELTSWVKIACIVQYTVNLSTNIQLQARYTLALL
LQESASAKHLCQGF

>gi568815591r:124646528_124864976|GENSCAN_predicted_CDS_5|945_bp
attcaagtatataaaaaggagactcagggtatcaccagctctggctttgcatctttgacg
tttgagggaactttgggagcccctatcatacctcgcacttcaagcaagtattttaacttc
actactgaggaccacaaaatggtagaagccttacgtgtttgggcatctactcatatgtca
ccgtcttggacattactaaaattgtgtgatgttcagccaatgcagtattttgacctgact
tgtcagctcttgggcaaagcagaagtggacggagcatcatttcttctaaaggttggaagc
tttcttagaatctatagccttcataccaaacttcaatcaatgaattcagagaatcagaca
atgttaagtttagagtttcatcttcatggaggtaccagttacggtcggggaatcagggtc
ttgccagaaagtaactctgatgtggatcaactgaaaaaggatttagaatctgcaaatttg
acagccaatcagcattcagatgttatctgtcaatcagaacctgacgacagctttccaagc
tctggatcagtatcattatacgaggtagaaagatgtcaacagctatctgctacaacactg
ggtattgtacccctccaatatgtgtttgttatgacctttacacttgatgatggaacagga
gtactagaagcctatctcatggattctgccgctgcaagctcaaaacccttattggacagg
gagcacacatacgggcaggtgcaggaactgggttatttaggagacatacttcagactctg
aaagcacagatgaacacaggagagttaacaagttgggtgaagatagcctgcatcgttcag
tacactgtcaacctttctaccaatattcagctacaagccaggtatacactggccctctta
ttacaagaatcagcctctgccaaacacctttgtcaaggtttttaa