GENSCAN 1.0	Date run:  4-Nov-116	Time: 04:09:24

Sequence gi568815591r:41589653_41800374 : 210722 bp : 39.46% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   2624   2317  308  2  2   60  105   148 0.295  10.51
 1.00 Prom -  14638  14599   40                              -5.45

 2.00 Prom +  20631  20670   40                              -4.45
 2.01 Init +  31441  31524   84  0  0   79  115    58 0.675   8.47
 2.02 Term +  37851  37919   69  2  0   77   54    65 0.206  -1.04
 2.03 PlyA +  38089  38094    6                               1.05

 3.03 PlyA -  38881  38876    6                               1.05
 3.02 Term -  45705  45423  283  2  1   52   42   164 0.001   2.11
 3.01 Init -  58952  58735  218  2  2   50   18   240 0.154  11.41
 3.00 Prom -  63155  63116   40                              -3.65

 4.16 PlyA -  63930  63925    6                               1.05
 4.15 Term -  68293  68102  192  1  0   53   40   131 0.481   1.24
 4.14 Intr -  69269  69241   29  0  2   96   50    38 0.137  -2.28
 4.13 Intr -  77180  76968  213  0  0   24   73   183 0.352   8.16
 4.12 Intr -  83013  82920   94  0  1   44   84    32 0.001  -2.98
 4.11 Intr -  95099  94987  113  0  2  148   72    26 0.040   6.18
 4.10 Intr - 100890 100012  879  1  0  112   15   929 0.074  78.37
 4.09 Intr - 102718 102506  213  2  0   42   53   134 0.015   3.06
 4.08 Intr - 110649 110335  315  1  0   28   77   354 0.370  23.41
 4.07 Intr - 115819 115632  188  0  2   69   87   214 0.966  17.81
 4.06 Intr - 116196 116078  119  0  2   75   36   118 0.837   3.64
 4.05 Intr - 116552 116488   65  0  2   46   77    47 0.377  -3.08
 4.04 Intr - 119353 119201  153  2  0   61   94    98 0.271   6.82
 4.03 Intr - 127383 127123  261  1  0   -3   47   200 0.344   3.34
 4.02 Intr - 130758 130653  106  0  1   52   72    71 0.108   0.77
 4.01 Init - 137027 136956   72  2  0   94   27    84 0.459   4.02
 4.00 Prom - 137206 137167   40                              -7.25

 5.02 PlyA - 140782 140777    6                               1.05
 5.01 Sngl - 143324 143121  204  2  0  100   44   301 0.818  21.84
 5.00 Prom - 145410 145371   40                              -7.45

 6.00 Prom + 150757 150796   40                              -3.45
 6.01 Init + 156256 156369  114  0  0   58  102    37 0.200   2.37
 6.02 Intr + 160968 161044   77  2  2   87   92    37 0.073   1.39
 6.03 Term + 177559 177691  133  1  1  100   47   114 0.648   5.08
 6.04 PlyA + 178411 178416    6                               1.05

 7.00 Prom + 180369 180408   40                              -5.35
 7.01 Init + 180494 180631  138  1  0   78   82    56 0.418   4.19
 7.02 Intr + 187583 187748  166  1  1   73   87    76 0.437   4.61
 7.03 Intr + 193883 194061  179  0  2   59   70   111 0.106   5.12
 7.04 Intr + 199568 199693  126  1  0    1   54   136 0.076   1.46
 7.05 Term + 201978 202136  159  2  0   32   43   145 0.112   1.36
 7.06 PlyA + 203421 203426    6                               1.05

 8.02 PlyA - 204516 204511    6                               1.05
 8.01 Term - 208672 208525  148  0  1   96   42   106 0.600   3.19

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 100890  99998  893  1  2  112   40   933 0.922  82.50


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:41589653_41800374|GENSCAN_predicted_peptide_1|103_aa
MACPGRVGGAAESDCNSFQRTGMYLLCTKSDVRRAAFSYEASQVKSCKCLWLGPSLANAY
GCCLELDSLMTIVYFSNPTAMNVALVHILDDDDENHILKMAES

>gi568815591r:41589653_41800374|GENSCAN_predicted_CDS_1|309_bp
atggcttgtccaggcagggttgggggagcagctgaatctgactgcaactccttccagaga
actggaatgtacttgctgtgcaccaagtctgatgtgaggagggcagccttctcctatgag
gcctcccaggtaaagtcttgcaaatgcttatggttgggaccaagccttgcaaatgcttat
ggttgttgcctagagctggactccttgatgacaattgtttatttttctaatcccactgct
atgaatgtggctctagttcacatcttagatgatgatgatgagaaccatatactaaagatg
gcagaaagn

>gi568815591r:41589653_41800374|GENSCAN_predicted_peptide_2|50_aa
MGSLLVLRALQAAMEPVRFPVHRMAGEMLWQPKMSSDIAKCPLKCEIAPS

>gi568815591r:41589653_41800374|GENSCAN_predicted_CDS_2|153_bp
atgggctccctcttggtcctaagagcactacaggcagcaatggagccagtgagatttcct
gttcacaggatggcaggagagatgttgtggcaaccaaaaatgtcttcagatattgctaaa
tgtcccctgaagtgtgaaattgcccccagttga

>gi568815591r:41589653_41800374|GENSCAN_predicted_peptide_3|166_aa
MLPLDAKTNSGDETKAGQELIVLRSLKLKNSGRDEYGKEKKQQAVEVDQVPEGRKISGNS
ASRGAKQQLWQLGRVHGSWPDYRDKMACCRHYAEAEDMGHLTEISISQLGTVQNASPVST
STTKGDFSAVSPSTYSKAMYRKWPLSFDLLSPPVCLLPTLVTQGPA

>gi568815591r:41589653_41800374|GENSCAN_predicted_CDS_3|501_bp
atgctgcctcttgatgccaaaaccaactctggagatgaaacaaaagcaggacaggagttg
attgttctcagatctttaaaactgaaaaattcagggagagacgaatatggaaaggaaaag
aaacagcaggcagtagaagtggatcaagtacccgagggaaggaaaattagtgggaattct
gcctcaaggggtgcaaaacagcagctgtggcagctgggccgagttcatgggagctggcca
gactacagagacaagatggcctgttgcaggcactacgctgaggcagaggacatgggccac
cttacagagatctcaatttcacagcttggcacagttcagaatgcgagtccagtaagcact
agtacaacaaaaggagacttctctgcagtctcaccatccacctactccaaggctatgtac
aggaagtggccattgagtttcgaccttctgtccccgccagtatgcctgctgcccacactg
gtcacacagggcccagcttaa

>gi568815591r:41589653_41800374|GENSCAN_predicted_peptide_4|1003_aa
MGNSLKPSQSLWSGNYDYNPTGYMGRLLLNLEQAMVGIWHMQRRKENELDMAKGGEEVVG
WSPLLFYIEWSKKASAIWKQITRNSGSELRGCLMENDEIPGRGDVKHKGLGNARAHSVGR
IARGITWEEDRDQGETEKKARSGMWPAIWEQVVGGSLWTGKSGCKSRLLLSYQSNGIYVL
NHHVFKSPMELITQGDPGTAAATGKHHYRVGRGPKLGVTQAAPPGSLVAAPRGENRAMQM
LQRGVGFVKSPVNQAASTSCQKGGKNQELLLKEVALAGAQGKNRGCRLDRLGPGSRHPAS
WARAAAAFRRDPWKLPAGAAQGSEGHSAAPDCPSCALAALPKDVPNSQPEMVEAVKKHIL
NMLHLKKRPDVTQPVPKAALLNAIRKLHVGKVGENGYVEIEDDIGRRAEMNELMEQTSEI
ITFAESGPRVISMAGFPLTIEIQAGRSSQGVASSKMNFLKIVPRFVHGIHVQQTVVRRST
VMEKRICFYMPPSGKNGRTARKTLHFEISKEGSDLSVVERAEVWLFLKVPKANRTRTKVT
IRLFQQQKHPQGSLDTGEEAEEVGLKGERSELLLSEKVVDARKSTWHVFPVSSSIQRLLD
QGKSSLDVRIACEQCQESGASLVLLGKKKKKEEEGEGKKKGGGEGGAGADEEKEQSHRPF
LMLQARQSEDHPHRRRRRGLECDGKVNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEG
ECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPTKLRPMSMLYYDDGQNIIK
KDIQNMIVEESRKLEMHGATRARDLYTWGKMYLVLLPGPTELEFGITEILIIDIFLKLAQ
VIQLACGGHTNLEQKSIIWGPWVAGVYPSSSGHNVEPALDKTPSNLRVHSHQDTLDIPVS
PTCTSLGYGKKLEGLEKTYNRHGENVGTPHVGIESDAENPELALVPWNGDEGREKATVLS
AREQTRLTFPVDRCACSLAEKTVAFSLHPSPPNCLPQFQEWHH

>gi568815591r:41589653_41800374|GENSCAN_predicted_CDS_4|3012_bp
atgggtaattcactgaagccttctcaaagcctgtggagtgggaactacgattacaacccc
actggctacatgggcagacttttactaaatttggaacaggcaatggtgggtatctggcac
atgcagcgcagaaaggaaaatgaactggacatggccaagggaggagaggaagtggtggga
tggagtccgttgctattttatattgagtggtccaaaaaggcttcagcgatctggaaacaa
ataacaagaaattcagggagtgagctgcgagggtgtctgatggaaaatgatgaaattcct
ggcagaggcgacgtcaagcacaaaggcttgggaaatgcacgagctcattctgttggaagg
atagcaagggggatcacatgggaagaagacagagaccaaggagaaacagagaagaaggca
cgttcggggatgtggccagcgatttgggaacaggttgtggggggatctttgtggacaggc
aaaagtggatgcaaatcaagattgctgctctcttatcagtccaatggaatctacgtgcta
aaccaccatgtcttcaagtcaccaatggaacttattacccaaggggatccagggacagct
gctgccacaggtaaacaccactatagggttggccgtggccctaagctaggtgtcacccaa
gctgctccaccgggttcgctagtggctgctcctcgaggcgagaacagagccatgcaaatg
ctccagcgtggagttgggtttgtgaagtcgccagtaaatcaggccgcctccactagctgc
caaaaggggggaaaaaatcaagagctgctcttaaaagaagttgcccttgctggtgctcag
ggtaaaaatagaggctgccgcttagaccggcttggccctggctccaggcatcctgcgagc
tgggctcgagcagcggccgcgttccggcgtgatccctggaagctgccagcaggtgctgct
caaggatccgaggggcacagcgcggcccccgactgtccgtcctgtgcgctggccgccctc
ccaaaggatgtacccaactctcagccagagatggtggaggccgtcaagaagcacatttta
aacatgctgcacttgaagaagagacccgatgtcacccagccggtacccaaggcggcgctt
ctgaacgcgatcagaaagcttcatgtgggcaaagtcggggagaacgggtatgtggagata
gaggatgacattggaaggagggcagaaatgaatgaacttatggagcagacctcggagatc
atcacgtttgccgagtcagggcctcgagtgataagtatggctggatttccgttaactata
gaaatccaggcagggagatcctcccagggagttgcaagttctaagatgaacttcttgaag
attgttcccagatttgtgcatgggatacatgtacagcagacagttgtaaggaggtccacg
gtcatggaaaagaggatatgtttctatatgccaccaagtgggaaaaatggaagaacagcc
aggaagacgctgcacttcgagatttccaaggaaggcagtgacctgtcagtggtggagcgt
gcagaagtctggctcttcctaaaagtccccaaggccaacaggaccaggaccaaagtcacc
atccgcctcttccagcagcagaagcacccgcagggcagcttggacacaggggaagaggcc
gaggaagtgggcttaaagggggagaggagtgaactgttgctctctgaaaaagtagtagac
gctcggaagagcacctggcatgtcttccctgtctccagcagcatccagcggttgctggac
cagggcaagagctccctggacgttcggattgcctgtgagcagtgccaggagagtggcgcc
agcttggttctcctgggcaagaagaagaagaaagaagaggagggggaagggaaaaagaag
ggcggaggtgaaggtggggcaggagcagatgaggaaaaggagcagtcgcacagacctttc
ctcatgctgcaggcccggcagtctgaagaccaccctcatcgccggcgtcggcggggcttg
gagtgtgatggcaaggtcaacatctgctgtaagaaacagttctttgtcagtttcaaggac
atcggctggaatgactggatcattgctccctctggctatcatgccaactactgcgagggt
gagtgcccgagccatatagcaggcacgtccgggtcctcactgtccttccactcaacagtc
atcaaccactaccgcatgcggggccatagcccctttgccaacctcaaatcgtgctgtgtg
cccaccaagctgagacccatgtccatgttgtactatgatgatggtcaaaacatcatcaaa
aaggacattcagaacatgatcgtggaggagtctagaaaactggaaatgcatggagcaact
agagctagagatctatatacatggggaaaaatgtacttagtcttattaccgggaccaaca
gagttggaatttggaattacagaaattttaattatcgatatatttcttaaacttgcccaa
gtcattcagcttgcatgtggcggacatacgaatctagaacagaagtccattatctggggg
ccttgggtggccggagtataccccagcagctcagggcacaatgtggaaccagccctggac
aagacgccctccaatctcagggtacactcacaccaggacactttagacataccagttagc
ccaacatgcacatctttgggatatgggaaaaaactggagggcctggagaaaacctacaac
agacatggggagaatgtgggaactccacacgttggtatagaatctgatgcagaaaaccca
gagctggctttggttccatggaatggggatgagggtagagaaaaagccacagtcctctct
gccagagaacagacacggctgacctttccagtggacagatgtgcctgttctctggcagaa
aagactgtggctttttctctacacccatctccgcccaactgcctgccccagtttcaggaa
tggcaccattag

>gi568815591r:41589653_41800374|GENSCAN_predicted_peptide_5|67_aa
MAVTMERGNLVVRTGKVTAEYGKSEVERRGQGVAANEVTAERGDSGQSRGDQMTVNLRSE
VPHPNES

>gi568815591r:41589653_41800374|GENSCAN_predicted_CDS_5|204_bp
atggcggtgacaatggaaagagggaacctggtggttcgcacaggaaaggtcacggcagaa
tacgggaagtcagaggtggagcggagaggccaaggggtggctgcaaatgaagttacagca
gagaggggggacagcggtcagagcagaggggatcaaatgaccgtgaacctgagaagtgaa
gtgcctcatccaaatgaaagttga

>gi568815591r:41589653_41800374|GENSCAN_predicted_peptide_6|107_aa
MATPQAEQLLGLLNQGYLLLLLDYMTNKGELFRSFLRKKDVTGKVFQSRPQVRVLGSCTR
KNSGPLGTPLAAGNILDRIRGQKGSQPICFIHAFNKPAPSHQNVMSL

>gi568815591r:41589653_41800374|GENSCAN_predicted_CDS_6|324_bp
atggctactccacaggcagagcagctgcttgggctgctcaatcaaggatacttattatta
cttctcgattatatgacaaacaagggtgaattattcaggagttttctgagaaagaaagat
gttactggaaaggtgttccagtccagaccccaagtgagggttcttggatcttgcacaaga
aagaattctggcccgctgggcacccctttagcagctggtaacattcttgacagaattaga
ggacagaaaggaagtcaaccaatctgcttcatccatgccttcaacaagcctgcaccaagc
catcagaatgtgatgtccctctga

>gi568815591r:41589653_41800374|GENSCAN_predicted_peptide_7|255_aa
MEYYEAIKKNDHVLCRDMDEAGSHHSQQTNTGAENQTLHVLTHKWEPNMRFFYSSYDIQG
ALTDVPNTVTVEFILQNWATLSDYLLPQRVTGLTERTVLQNSKELKTENEYKKVCREASA
VTWVTDTGGLDCNSSCRCGEKTVDFRGQVHRVRLWVGLVEKERESKILESGSVDPEKRPV
GWFAIEKKDRDRCRYIHDIMLTRVLQTKESTFAVHNGCDKNLVQKVPVKPNVLQAPSSSK
PNVLQAPLSSILECS

>gi568815591r:41589653_41800374|GENSCAN_predicted_CDS_7|768_bp
atggaatactatgaagccataaaaaagaatgatcatgtcctttgcagggacatggatgaa
gctggaagccatcattctcagcaaactaacacaggagcggaaaaccaaacactgcatgtt
ctcactcataagtgggagccaaatatgagattcttttatagcagctatgacattcaagga
gctcttacagatgtccccaatactgtcacagtggagtttatcttacagaattgggccact
ctaagtgactacctgttgcctcaaagggtaacaggtctaacagaaagaactgtactccag
aattcaaaggagctgaagacagagaacgaatacaagaaagtctgtagggaggcaagtgca
gtgacctgggtgacagatactggtggcctggactgcaacagcagctgtagatgtggagag
aagacggtagatttcagaggacaggtccacagggttcgactgtgggttggtttagtggaa
aaggaaagggaatctaaaatactagaatctggcagtgttgacccagagaagaggcccgtg
gggtggtttgctatagagaagaaagacagagacaggtgtcgctatatccatgacatcatg
ctcaccagggtcttacaaactaaggagagcacatttgcagtgcacaatgggtgtgacaaa
aacttggttcaaaaggttccagtgaagcctaatgtcctacaggctccatcatcctcaaag
cctaatgtcctacaggctccattgtcctcaattcttgagtgttcctga

>gi568815591r:41589653_41800374|GENSCAN_predicted_peptide_8|49_aa
XSLTTLDCIAWVPVGSSSIRWGTDKECEAFLLHSRQLGGCLAVGSCALA

>gi568815591r:41589653_41800374|GENSCAN_predicted_CDS_8|150_bp
nnaagcttgacgactttggattgcattgcctgggttccagtgggaagcagcagtataagg
tgggggacagataaagagtgtgaggcatttcttctccattcccgccagcttggaggctgc
cttgctgttggcagctgtgcccttgcatga