GENSCAN 1.0	Date run:  4-Nov-116	Time: 04:01:57

Sequence gi568815583f:77358408_77579312 : 220905 bp : 43.38% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5071   5233  163  2  1  100  123     8 0.220   4.53
 1.02 Intr +  60366  60455   90  0  0   73   89    45 0.752   2.21
 1.03 Term +  61475  61709  235  2  1   46   36   213 0.586   7.69
 1.04 PlyA +  62215  62220    6                               1.05

 2.00 Prom +  68250  68289   40                              -5.76
 2.01 Init +  76516  76655  140  0  2   51  103    77 0.360   5.11
 2.02 Intr +  99997 100089   93  1  0  128   94    72 0.825  10.88
 2.03 Intr + 105833 105980  148  2  1   66   99   113 0.985  10.44
 2.04 Intr + 108688 108900  213  0  0   79   91    70 0.927   5.31
 2.05 Intr + 112503 112635  133  2  1   66   64   174 0.996  13.02
 2.06 Intr + 119888 120103  216  0  0   42  119   368 0.827  33.78
 2.07 Term + 139786 139895  110  2  2   74   43    59 0.067  -1.33
 2.08 PlyA + 140691 140696    6                               1.05

 3.10 PlyA - 143786 143781    6                               1.05
 3.09 Term - 147210 146584  627  0  0  113   47   193 0.575  12.06
 3.08 Intr - 157371 157340   32  1  2   72   91    10 0.016  -2.45
 3.07 Intr - 161282 161232   51  0  0   72   95    67 0.229   4.68
 3.06 Intr - 165021 164972   50  2  2   92   73    27 0.112  -0.08
 3.05 Intr - 172616 172481  136  0  1  113   97    32 0.639   6.23
 3.04 Intr - 172999 172969   31  1  1   91   89    -8 0.602  -2.70
 3.03 Intr - 173831 173778   54  2  0   83   29   120 0.631   4.78
 3.02 Intr - 174864 174696  169  2  1  100   51    85 0.771   5.95
 3.01 Init - 177505 177501    5  1  2   81   55     0 0.344  -4.53
 3.00 Prom - 179675 179636   40                              -7.16

 4.00 Prom + 180344 180383   40                              -6.56
 4.01 Init + 180421 180506   86  0  2   78   94    41 0.343   3.99
 4.02 Intr + 183573 183773  201  0  0   84   42    66 0.087   0.00
 4.03 Intr + 186173 186273  101  2  2  111   81    57 0.111   7.05
 4.04 Intr + 189736 189760   25  2  1   80   89    39 0.062   0.28
 4.05 Intr + 190765 190857   93  1  0  104   54    54 0.032   2.68
 4.06 Term + 194101 194170   70  1  1   86   48    77 0.039   0.91
 4.07 PlyA + 194500 194505    6                              -0.45

 5.00 Prom + 198083 198122   40                              -3.96
 5.01 Init + 205412 205486   75  1  0   47   94    52 0.459   2.79
 5.02 Intr + 206730 206814   85  2  1   19   69   107 0.484   1.29
 5.03 Intr + 209498 209579   82  0  1   94   60    37 0.596   0.20
 5.04 Intr + 210628 210769  142  1  1  117  113     5 0.909   6.26
 5.05 Term + 214259 214336   78  1  0  112   43    55 0.035   1.16
 5.06 PlyA + 214439 214444    6                               1.05

 6.02 PlyA - 216147 216142    6                               1.05
 6.01 Term - 220769 220671   99  2  0   56   55   140 0.866   5.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  60288  60292    5  2  2  102   81     0 0.805   0.17
S.002 Term + 120772 120908  137  2  2   96   50    30 0.881  -1.82
S.003 Init - 136217 136154   64  2  1   59  103    48 0.834   4.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:77358408_77579312|GENSCAN_predicted_peptide_1|162_aa
XFAPFPPTHPRSIKQQEPFAGGSLSIEKIPTSVLIHLTGGSLHFLSFNFLLILIREQYGF
SDYTHHYITSFIGGKKKTLWLNKNQTRAAPPGFPRVSALNPRQPWSHRRRVSRRQPSGRG
QPGRCYLRGAHAAAATTITVRPVPFLVTTAAAAEQLTLTNNN

>gi568815583f:77358408_77579312|GENSCAN_predicted_CDS_1|489_bp
ncctttgcaccttttcctccaacccaccccagatctataaaacagcaggaaccttttgct
gggggctccctcagcattgagaaaatccccacctctgtgttgatccacttgacaggaggg
agcctgcactttctcagctttaacttcttgcttatcctaattcgagagcaatatgggttc
tctgactatacacatcactacatcacttcatttatcgggggaaaaaaaaagacgctgtgg
ctgaacaaaaatcaaacccgcgccgccccgcccggattcccccgggtcagcgccctcaac
ccgcggcaaccctggtcccacagacggcgcgtgagtagaagacaaccgagcggacgcgga
cagccgggccgctgttacctgaggggcgcacacgccgccgcggcgaccaccatcaccgtc
cgtcccgtccccttcctggtgaccacggccgccgccgccgagcaactgacactgactaac
aacaactaa

>gi568815583f:77358408_77579312|GENSCAN_predicted_peptide_2|350_aa
MDKNVHSSIILNSPNVHRNRMGKQMFLVSTWMITKHNIEQKKPDKCIEMENLMTSSTLPP
LFADEDGSKESNDLATTGLNHPEVPYSSGATSSTNNPEFVEDLSQGQLLQSESSNAAEGN
EQRHEDEQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPE
ITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQKTEAYKVFSRKTQDRQKGKSH
RQAREAELRQLRKSNMEFEERNAALQKHVESMRTAVEKLEVDVIQERSRNTVLQQHLETL
RQVLTSSFASMPLPERLHYRILSPEPAELLPALSSPCAGFFSLEALRECM

>gi568815583f:77358408_77579312|GENSCAN_predicted_CDS_2|1053_bp
atggacaagaatgttcatagtagcatcattcttaatagcccaaatgtccatcgaaataga
atgggtaaacaaatgtttcttgtatctacatggatgatcaccaagcataatatcgagcaa
aagaagccagataagtgcatagagatggaaaacttgatgactagctccaccctaccgccc
ctttttgcagatgaagacggttccaaggagagtaatgatctggctaccactgggttaaat
cacccagaggttccatacagtagtggcgccacatcatccaccaacaatccagaatttgtg
gaggatctctctcaaggtcagttgcttcagagtgagtcttcaaatgcagcagaaggcaat
gaacagaggcatgaagatgagcaacgaagtaaacgaggaggttggtccaaaggaagaaag
aggaagaaacctcttcgagacagcaatgcacccaaatccccccttacaggatatgttcgg
ttcatgaatgagcgtcgagaacaacttcgagcaaagagaccagaagtcccatttccagaa
atcacaaggatgttaggcaatgaatggagtaaactgcctcctgaggaaaaacagcgctac
cttgatgaagcagacagagataaggagcgttacatgaaggaactggaacagtatcagaaa
acagaggcctacaaggtcttcagtaggaaaacccaggaccgtcagaaaggcaaatctcat
aggcaagctcgggaagcagagctccgccagcttcgcaaatccaacatggagtttgaggag
aggaatgcagccctgcaaaagcacgtggagagcatgcgcacagcagtggagaagctggag
gtggatgtgatccaggagcggagccgcaacacagtcttacagcagcacctggagaccctg
cggcaggtgctgaccagcagctttgccagcatgcccttgcctgaaagacttcattaccgg
atcctcagccctgagcctgcagagctgctgccggcactttcttctccctgcgctggattt
ttctctttggaagcattaagggagtgcatgtga

>gi568815583f:77358408_77579312|GENSCAN_predicted_peptide_3|384_aa
MRNVNLSLNLKHLLILENGSDYGSRTSEVRGSKGWDTKAQRRQGHREYYSSGTVPGLWGP
AAESGPVDKIMAMAILRWRKRASERPSVSQGPTLCLGTVLSTGEGFNVIKANNNACPPRV
YILMQEKEKQHKIITEVKLCPSSCIISGVLKAGKSKIKAPADVVSGFPNGGPMFMQAPGC
TVFLEHAEKQVLAGEDAEASVSCWFSCMGGVGCGSREGEAEPYDQGHRAQHAVPTRPCQG
LALSSWASGDWAILSPLTEEDVLGKMCLSCISSGKLPKLRLRPFTSNLEISACFSLVDEA
KPQSGRPNSCIAGQDVQPSGAQVQGWKGTCGQSLHFFLLFTWGKPRPQERKAFDQGQSRI
LCPNRCSHPLFSAQGSATYDPEPQ

>gi568815583f:77358408_77579312|GENSCAN_predicted_CDS_3|1155_bp
atgagaaatgtcaacctttcactcaacctcaagcatctccttatcctagagaatggctca
gattatggctcaaggacatcagaagtgagaggatcgaaaggctgggacaccaaggctcag
aggcggcaagggcacagggaatactattcttctggaacagtccctggactgtggggccca
gctgctgaaagtggacccgtggacaagatcatggcaatggccatcctgagatggagaaag
cgagcctcagagaggccaagtgtttctcagggacctacactgtgtttgggcactgtgcta
agtactggggagggtttcaatgttatcaaagcaaacaacaatgcctgccctcctagagtt
tatattctaatgcaggagaaggagaaacaacataagattatcacagaagtgaagttgtgt
ccttcttcgtgcatcatctcaggagttctgaaagctgggaagtccaagatcaaggcccca
gcagatgtggtgtctggtttcccaaatggtggccccatgttcatgcaggccccaggttgc
actgtatttcttgaacatgcggagaagcaggtgctggctggtgaggatgcagaagccagt
gtgtcctgctggttctcctgcatgggaggcgtagggtgtgggagcagagagggtgaggca
gagccctatgatcaaggccatcgggctcagcatgctgtccctacacgaccttgccagggt
cttgctctgtccagctgggcatctggtgactgggccatcctgagtcccctgactgaagaa
gatgtcctaggaaagatgtgtctgagctgcatcagctctgggaagctgcccaagctgagg
ctgaggccctttacctcgaacctggaaatctctgcctgcttcagccttgtcgatgaggca
aagcctcagagtggacgtcccaactcatgcattgctggccaggacgtgcagccatctgga
gcacaggtccagggctggaagggcacttgtgggcagtcactccacttcttcctcctattc
acatgggggaaaccaaggcctcaagagaggaaggcgtttgatcaaggccagtccaggatt
ctgtgtccaaacaggtgttcacatcccctgttcagtgctcaggggtctgccacatatgac
cccgaacctcagtga

>gi568815583f:77358408_77579312|GENSCAN_predicted_peptide_4|191_aa
MSNSAEMEHFHCPEKSTGWRCEEEQTLSSLPRQCLGLEDSPQIRCQLGQPAKSPGLSGCS
LADDDSQYSLPAHGTDYCSLGHPSDVPEDSEAGLSGCLRSLLVLYPTSSSLLPLLSFLEL
HEERPQLDEELCDECESRKPALGLTLWLLPGSYCGLYLPRDEEAAPMPGVHKLKDLLVSF
GPRTFRLPSLG

>gi568815583f:77358408_77579312|GENSCAN_predicted_CDS_4|576_bp
atgtcgaatagtgcagaaatggaacatttccattgtccagaaaagtctactggatggcgc
tgtgaggaggaacagaccctctccagtctgccgagacagtgcctggggctggaagactcc
ccccaaatccgatgccagctaggccagccagccaagtcccctggcctttctggttgctcg
ttggctgatgatgacagtcagtactccctgcctgcccatgggactgactactgcagtctt
gggcaccccagcgatgtcccagaagactctgaggcagggctctcaggatgcctacggagc
ctcctggtgctctaccccacctccagctccctcctgcctctcctctccttcttagagctc
catgaagaaaggccccagctcgatgaagagctctgcgatgagtgtgagtccaggaagcca
gctctggggctcacactctggctgctgcccggcagctactgtggcctgtacctgcccagg
gatgaggaggccgcccccatgccaggtgtgcacaagctcaaggacttgctggtgtcattt
ggacctcgtactttccgacttcctagccttggctga

>gi568815583f:77358408_77579312|GENSCAN_predicted_peptide_5|153_aa
MIYEDKLKLACCRMRDMRKRSGSSQPPEKGNITELGQPLFAFVEEEHEGVFAVAGIETTV
LGLTTGTLCRPQADHQLLWKRAPFAFKSKYKYGQLLNGWPSDSGASALCEGWAFCPCSPS
NPGFSHRTAPDLLGPPVGNRSVLAHHREIFRWR

>gi568815583f:77358408_77579312|GENSCAN_predicted_CDS_5|462_bp
atgatttatgaggacaagctcaagctggcctgctgtaggatgagagacatgaggaaaaga
agtgggtcatcccagccaccagagaagggaaatatcacagaattaggccagcctttgttt
gcctttgtggaggaggagcatgagggggtcttcgctgtggctggaattgaaaccactgtg
ctggggctgaccacgggcactctctgcaggcctcaggctgaccaccagctgctctggaag
agagctccttttgctttcaaaagcaaatacaaatacgggcagcttctgaatggatggcca
agtgactctggagcttccgcgctgtgtgagggctgggctttctgtccctgttcaccctcg
aacccaggcttcagccaccgcacggccccagatctgcttgggcccccagtgggcaaccgc
tcggtgctggcccaccacagggaaatattccggtggaggtaa

>gi568815583f:77358408_77579312|GENSCAN_predicted_peptide_6|32_aa
TQLKAPKIKKKTETRYGSCDQLGQKAQDERPL

>gi568815583f:77358408_77579312|GENSCAN_predicted_CDS_6|99_bp
acacagctgaaagcacccaagatcaagaagaaaactgaaacccgctatgggagctgtgac
cagctggggcagaaggctcaagacgagaggcccctgtga