GENSCAN 1.0	Date run:  4-Nov-116	Time: 04:00:43

Sequence gi568815597r:67605475_67807686 : 202212 bp : 41.70% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3189   3314  126  1  0   57   64   136 0.849   7.83
 1.02 Term +   7547   7692  146  0  2   59   54   135 0.815   4.29
 1.03 PlyA +   8749   8754    6                               1.05

 2.10 PlyA -   9032   9027    6                               1.05
 2.09 Term -   9550   9337  214  0  1   46   45   141 0.037   1.32
 2.08 Intr -  12131  12004  128  2  2   69   59    74 0.044   1.16
 2.07 Intr -  14394  14281  114  0  0   81   63    60 0.014   2.52
 2.06 Intr -  21184  21118   67  0  1   67   97    12 0.001  -2.01
 2.05 Intr -  27730  27511  220  2  1   99   63   123 0.264   7.34
 2.04 Intr -  29020  28865  156  2  0   76   27    97 0.387   1.46
 2.03 Intr -  32944  32919   26  0  2  109   53    30 0.024  -1.65
 2.02 Intr -  34113  34041   73  1  1  108   79    79 0.028   6.55
 2.01 Init -  52609  52468  142  1  1   65   69    92 0.062   5.34
 2.00 Prom -  53121  53082   40                             -10.05

 3.02 PlyA -  53697  53692    6                               1.05
 3.01 Sngl -  55541  55266  276  2  0   68   55   198 0.645   9.63
 3.00 Prom -  60185  60146   40                              -3.95

 4.00 Prom +  60480  60519   40                              -7.65
 4.01 Init +  62967  63008   42  2  0   95   69    65 0.174   5.77
 4.02 Intr +  79452  79734  283  2  1   -2   70   191 0.130   4.37
 4.03 Intr +  80013  80064   52  1  1   18  113    45 0.309  -2.95
 4.04 Intr +  80130  80546  417  0  0   64   -1   266 0.772   7.51
 4.05 Intr +  80551  80652  102  1  0   86   86   181 0.998  16.07
 4.06 Intr +  80876  81113  238  2  1   76  103   363 0.969  33.29
 4.07 Term +  82187  82300  114  1  0   78   45    92 0.915   1.49
 4.08 PlyA +  82604  82609    6                               1.05

 5.05 PlyA -  82723  82718    6                               1.05
 5.04 Term -  93310  93146  165  1  0   50   43   107 0.669  -0.67
 5.03 Intr -  95375  95231  145  1  1  118   97    44 0.254   7.66
 5.02 Intr - 111196 111151   46  2  1   99  103    -4 0.039  -1.25
 5.01 Init - 114816 114552  265  0  1   68   40   231 0.085  13.52
 5.00 Prom - 120734 120695   40                              -6.55

 6.04 PlyA - 121703 121698    6                               1.05
 6.03 Term - 130681 130589   93  1  0   86   45   107 0.648   3.05
 6.02 Intr - 135402 135302  101  1  2   61   81    96 0.230   5.11
 6.01 Init - 137845 137821   25  1  1   63   79    19 0.205  -1.66
 6.00 Prom - 138201 138162   40                              -5.25

 7.04 PlyA - 138445 138440    6                               1.05
 7.03 Term - 139060 138858  203  2  2   61   40   196 0.742   8.67
 7.02 Intr - 146109 145974  136  0  1   39   57    88 0.212   0.02
 7.01 Init - 147148 147068   81  1  0   18   84    89 0.232   2.52
 7.00 Prom - 149799 149760   40                              -3.45

 8.07 PlyA - 150122 150117    6                               1.05
 8.06 Term - 151126 151025  102  1  0   52   53   122 0.596   2.40
 8.05 Intr - 156373 156277   97  0  1  123   86    31 0.247   5.49
 8.04 Intr - 161454 161315  140  0  2   54   37   116 0.053   1.44
 8.03 Intr - 162125 162019  107  0  2   82   38    65 0.065  -0.09
 8.02 Intr - 166084 165969  116  0  2   93   -7   139 0.077   4.07
 8.01 Init - 168645 168566   80  0  2   53   66    63 0.128   1.18
 8.00 Prom - 174677 174638   40                              -5.55

 9.00 Prom + 178520 178559   40                              -3.65
 9.01 Init + 183655 183694   40  0  1  113   95    47 0.495   8.30
 9.02 Intr + 185053 185099   47  2  2  105   69     4 0.041  -2.59
 9.03 Term + 193127 193192   66  1  0  115   39   105 0.972   5.26
 9.04 PlyA + 193491 193496    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  69246  69674  429  2  0   59   39   198 0.871   6.47
S.002 Init + 192913 192957   45  0  0   76   53    73 0.924   3.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:67605475_67807686|GENSCAN_predicted_peptide_1|90_aa
XGKFPGNLTISSCELGLASPGVPLVIAEGLAEKGTSEQETERGLQRDQCPESRRVGSQND
SGRLCTVEHWPLTAVGVWRSCWPGALQGLC

>gi568815597r:67605475_67807686|GENSCAN_predicted_CDS_1|273_bp
nctggcaaatttcctggaaatttaaccatcagctcttgtgaactgggactagccagccct
ggcgtaccactggtgattgcggaaggccttgctgagaaagggacatctgaacaggaaact
gaaagaggattgcagcgtgaccagtgccctgagagcagacgagtggggagccagaatgac
agtggccgcctctgcacagtggaacactggcccttgacagctgtaggggtctggaggagc
tgctggcctggcgctttgcagggcttgtgctga

>gi568815597r:67605475_67807686|GENSCAN_predicted_peptide_2|379_aa
MISMMKLVHKNIKATPYVQKVEENIAIMRREFESVKKTQMELLEIIQSFSDFLTWQLASK
RAEMEVASVLKTHQNLKSKAEWFLLSAFMGCLTLMRPHQNLITRVSLKESLLHGTPGTVF
PCPDKETDSERESLVQRTEGTLIFHVASQQALVCPVPIAAEDISFPDICQITFYLVPDIY
SVKMGHSHDPRDQTDPHRQDRLGKAQTNHMASPTTKKLANVRKHMEYLECSAKNETMDTK
TPCSLDCSGVISSKKPFGFSPSNQTGGIIAAQDTHVWGTEEEITSSYERDAQFHLEGEYA
ASSKTQHSSFSESEIQVQVQLSWVIRVQISHKAVIKVSVRLQSPQGSTAGGSVSQLTWVA
VGSPQKIDFPAQSHGAGRR

>gi568815597r:67605475_67807686|GENSCAN_predicted_CDS_2|1140_bp
atgatatcaatgatgaaactagtgcataagaatattaaagccactccatatgttcaaaag
gtagaagaaaatatagccataatgagaagagaatttgaaagtgtgaaaaagacccaaatg
gaacttctagagattatccaaagtttttcagacttcctgacatggcaactggcttcaaag
agagcggaaatggaagttgccagcgttcttaagacgcatcagaacctgaagtccaaggct
gaatggttcctactctcagctttcatgggatgcctaaccctcatgaggcctcatcaaaac
ctcattaccagagtgagcctaaaagagtctctgctccatgggaccccagggacagtgttc
ccatgtccagataaagaaacagattcagagagggaaagtcttgtgcagaggacagagggg
accctcatctttcatgtcgcttcccagcaagcccttgtgtgtcctgtgccaattgcagct
gaagatatttcatttcctgatatttgccaaatcaccttttacctagttcctgatatttat
tctgtcaagatggggcacagccatgacccgagagaccagacagacccacacaggcaagac
cgattaggcaaagcccagactaatcacatggcctcgcctacaacaaaaaaactagcaaat
gtgaggaagcacatggaatatttggagtgctctgccaagaatgagacgatggacacaaaa
accccttgttctctagactgttcaggtgtcatctcctccaagaagccctttggattctct
ccctccaatcagactggggggataatagcagcacaagacactcatgtatgggggacagag
gaagaaataacttcatcatatgagagggatgcccaattccatttggaaggggagtatgca
gcctccagcaaaacccaacacagcagtttctctgagtcagaaattcaggtacaggtgcag
cttagttgggtgattagggtgcagatctctcacaaagctgtaatcaaggtgtctgtcagg
ctacagtcacctcaagggtcaactgcagggggatctgtttcccagctcacttgggtggct
gttggcagtcctcagaaaatcgactttccagctcaatcacatggtgctggcagacgttag

>gi568815597r:67605475_67807686|GENSCAN_predicted_peptide_3|91_aa
MASNVINKSNPHSMNPRVFIGNLNTLVVKKSDVEAIFSKYGKTVGGSVHKGFASVHCVHE
RNIQPTVAGGDGRMIAGQVLDTNLAAELKVN

>gi568815597r:67605475_67807686|GENSCAN_predicted_CDS_3|276_bp
atggctagcaatgttatcaacaagtcaaatcctcactccatgaaccccagagtattcatt
gggaatctcaacactcttgtggtcaagaagtctgatgtggaagcaatcttttcaaagtat
ggcaaaactgtgggtggctctgttcataagggctttgcctctgttcactgtgttcatgag
agaaatatccagcctactgtggcaggaggggatggcagaatgattgccggccaagtttta
gatactaatctggctgcagagctgaaagtgaactga

>gi568815597r:67605475_67807686|GENSCAN_predicted_peptide_4|415_aa
MTFGQQDPVQNEDVPPTPNGPRQPDKSARGTRLPLSAPPPPPPPRLASRVAPPFSAPLNL
TPGAGVKLLEQADLHSPMAKLHANEAEGGWLRVGRITPESGALCPPVAVCNMTLEEFSAG
EQKTESRAVEGLQGRKLKSLHRATPALAPSGLSVELPRTERACPPTRTSPAGAFAKGSSG
RRCPCGSRGWQPVAGALSGLLTGRPVLGRAGVMGGDGAAGAPGFRRAQVRGGACIREGGA
WYRTRGAAMAPRAPGLTGPLALARVMDKVGDALEEVLSKALSQRTITVGVYEAAKLLNVD
PDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRLAELLLLETDAGP
AASEGAEQPPDLHCVLVTNPHSSQWKDPALSQLICFCRESRYMDQWVPVINLPER

>gi568815597r:67605475_67807686|GENSCAN_predicted_CDS_4|1248_bp
atgacgtttggccagcaggacccagtgcaaaatgaagatgtgccccccactcccaatggt
ccccgccaaccggataagagtgcgcgcgggacccgccttcccctctcggcaccgcccccg
cccccgccccctcggctcgcctcccgcgtggctcctcccttttccgctcctctcaacctg
actccaggagctggggtcaaattgctggagcaggctgatttgcatagcccaatggccaag
ctgcatgcaaatgaggcggaaggtggttggctgagggttggcaggataaccccggagagc
ggggccctttgtcctccagtggctgtttgcaatatgactttggaggaattctcggctgga
gagcagaagaccgaaagccgggctgtggaaggcttgcaggggaggaagctaaaaagtttg
cacagggcaactcccgcccttgctccctcgggactctccgtggagctcccacggactgaa
agagcgtgccccccaacccgaacgagccccgccggggcctttgcaaagggcagcagtggc
cgtcgctgcccgtgcggctcccgtggctggcagcctgtggcaggggcactctcgggactt
ctcacgggacgcccggtccttgggcgtgcaggggtcatggggggtgacggggccgcggga
gcgccgggttttcgtagagcccaggtgcgcggtggtgcttgcattcgagagggaggggcg
tggtaccggacgaggggggcggcgatggccccgagggcaccggggctgacgggacccctc
gcccttgcccgcgtgatggataaggtgggggatgccctggaggaagtgctcagcaaagcc
ctgagtcagcgcacgatcactgtcggggtgtacgaagcggccaagctgctcaacgtcgac
cccgataacgtggtgttgtgcctgctggcggcggacgaggacgacgacagagatgtggct
ctgcagatccacttcaccctgatccaggcgttttgctgcgagaacgacatcaacatcctg
cgcgtcagcaacccgggccggctggcggagctcctgctcttggagaccgacgctggcccc
gcggcgagcgagggcgccgagcagcccccggacctgcactgcgtgctggtgacgaatcca
cattcatctcaatggaaggatcctgccttaagtcaacttatttgtttttgccgggaaagt
cgctacatggatcaatgggttccagtgattaatctccctgaacggtga

>gi568815597r:67605475_67807686|GENSCAN_predicted_peptide_5|206_aa
MGPPSPAENLFGAQDECAWSLGILVPHKWPSHAGGESSEHQQLALIKCMETSEAPPRLLR
AVQATKQVSICGLRTVSISRDTCRKEQQAPSLYSCCSEAGNKGWAGIPTEMRGGQNHQRT
RAGGSQQAPGYEPDTLQRWPLLLRASTPHLQKKTFANYVTSQGHYGSINLCTRASLKQSL
PEQMWAVLPPLSQALTDLFINVPDLK

>gi568815597r:67605475_67807686|GENSCAN_predicted_CDS_5|621_bp
atgggcccgccttcaccagctgaaaacttatttggggcacaggatgagtgtgcatggtcc
cttggaatcttggtgccacacaagtggccatctcatgctggaggtgaaagttcagagcac
cagcaactggccctaatcaaatgcatggaaacatcagaagctccacccaggcttctcaga
gctgtgcaggccaccaagcaagtgagcatctgtgggctcagaacagtcagtatttcacgg
gatacttgtaggaaggagcagcaagccccttccttgtattcttgctgttcagaggcaggc
aacaaagggtgggctgggattcccacagagatgaggggagggcaaaatcatcaaagaaca
agggcgggaggcagccaacaagccccaggctatgaaccggacacgctgcagagatggccc
ctgcttctgagagccagcactccacacttacaaaagaagacattcgccaactatgtgaca
tcacaagggcactatggatccataaatttgtgtactagggcaagcctaaagcagtcactc
cctgaacaaatgtgggcagtgctacctcctctaagccaggcactgacggacttgttcatt
aatgtccccgaccttaagtaa

>gi568815597r:67605475_67807686|GENSCAN_predicted_peptide_6|72_aa
MKNLASASVLEQWRSKTKALADSMSGEVLLPHTRCLLAMYHKFLQVKWQMYESLHKMGTG
RHPVDAKPFSVQ

>gi568815597r:67605475_67807686|GENSCAN_predicted_CDS_6|219_bp
atgaagaaccttgcttctgcttcagttttggagcagtggagatccaagaccaaggctcta
gcagattcgatgtctggtgaggtcctgcttcctcatacacggtgccttcttgctatgtac
cacaagttcctgcaagtgaaatggcagatgtatgagtcacttcataagatgggaacagga
agacatcctgttgatgccaagccattttcagttcagtga

>gi568815597r:67605475_67807686|GENSCAN_predicted_peptide_7|139_aa
MSGPNRKEHHDSLVIAAMSADPLGMSTTPNTATLTCLKTPPWTGDSVSPELPLLRLWRRL
GTETLTVGQSTEDYKLVLLLTNVLRISENQLFKEVPEHSVGHSGEETPGVASAFPWTPEN
FISGSGVADSSWQYKNSAV

>gi568815597r:67605475_67807686|GENSCAN_predicted_CDS_7|420_bp
atgtctgggcccaacaggaaagaacaccatgactcattagtgatagctgccatgagtgct
gatccattagggatgtctaccaccccaaacacagcaaccctgacctgtttgaagacccca
ccctggacaggggacagtgtttccccagagctgccactcttgaggctctggaggagactg
ggtacagagaccctaactgtgggacagtcaactgaagactataaactggtgctccttctt
acaaatgttcttcgtatatctgaaaatcagttatttaaagaagtgcccgagcacagtgta
gggcacagtggagaggaaacaccaggggtagcctctgcctttccttggacacctgagaat
ttcatctcaggctctggagttgcggacagcagttggcagtacaaaaactctgctgtttaa

>gi568815597r:67605475_67807686|GENSCAN_predicted_peptide_8|213_aa
MIQDSEKCLQSTHKDNATQSGRQHLCSSGTREEEGWIGPKSLSCFSRKSFAENHSSGTIQ
ELTDRLKTSIVGTFVQPKEVWKEGCITFPWVEKEEEAESELALPVYAPSVARPAFPKRTP
NPFREGEARPSEELLSRHLPDHQMPSSGITERVFLIAPASLPAPSLTRQKADGVHIPSGR
VKTITPYLVASKSNPLPILNPEDGKLVSRAIIL

>gi568815597r:67605475_67807686|GENSCAN_predicted_CDS_8|642_bp
atgattcaagactcagagaaatgtcttcagagtactcataaagataatgccacacagagt
ggccgacaacatctctgtagctcagggactcgcgaggaggaaggatggataggacccaag
tccctttcctgcttcagtcgcaaaagttttgctgaaaaccactcatccgggacaatacaa
gagctcacagatagattaaagactagtatagttggcacctttgtgcagcccaaggaggtc
tggaaggagggttgcataaccttcccatgggtggaaaaggaggaggaggcagagtctgaa
ctagcattgcctgtgtatgccccttctgtagctagacctgcattccctaagaggacacct
aaccctttccgtgagggggaagcgaggcccagcgaggaactgctgtccaggcatcttcct
gaccaccagatgccatcctcagggatcactgagagagttttcctgattgcccctgcctct
ctccctgcaccctccctcacccgacagaaagcggatggtgtgcacataccctcagggagg
gttaaaaccatcacaccctatcttgtggcctccaagtcaaacccactccccatcctgaac
ccagaagatgggaaactggtgtccagagccatcatcctttga

>gi568815597r:67605475_67807686|GENSCAN_predicted_peptide_9|50_aa
MAFGLQKMQKDFNDPLLVMYLCICIDNLIPTQCEYDEEEDLYDDPLPLNK

>gi568815597r:67605475_67807686|GENSCAN_predicted_CDS_9|153_bp
atggccttcggtctgcagaagatgcagaaagacttcaatgatcccctgttggtgatgtat
ttatgtatctgcatcgacaacttgatccctacccagtgtgaatatgatgaggaggaagac
ctttatgatgatccacttccacttaataaatag