Result of FASTA (omim) for pF1KB5636
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5636, 331 aa
  1>>>pF1KB5636 331 - 331 aa - 331 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.9356+/-0.000329; mu= 1.9883+/- 0.021
 mean_var=253.4558+/-51.190, 0's: 0 Z-trim(124.0): 45  B-trim: 0 in 0/57
 Lambda= 0.080561
 statistics sampled from 44877 (44927) to 44877 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.815), E-opt: 0.2 (0.527), width:  16
 Scan time:  9.960

The best scores are:                                      opt bits E(85289)
NP_001277333 (OMIM: 187040,613065) T-cell acute ly ( 331) 2243 272.9 6.4e-73
NP_001277332 (OMIM: 187040,613065) T-cell acute ly ( 331) 2243 272.9 6.4e-73
XP_016857678 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 2243 272.9 6.4e-73
XP_016857677 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 2243 272.9 6.4e-73
NP_001274276 (OMIM: 187040,613065) T-cell acute ly ( 331) 2243 272.9 6.4e-73
NP_001277334 (OMIM: 187040,613065) T-cell acute ly ( 331) 2243 272.9 6.4e-73
NP_003180 (OMIM: 187040,613065) T-cell acute lymph ( 331) 2243 272.9 6.4e-73
XP_016857680 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 2243 272.9 6.4e-73
XP_016857679 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 2243 272.9 6.4e-73
XP_005271217 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 2243 272.9 6.4e-73
XP_016857676 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 2243 272.9 6.4e-73
XP_016857682 (OMIM: 187040,613065) PREDICTED: T-ce ( 172) 1169 147.8 1.5e-35
NP_001277335 (OMIM: 187040,613065) T-cell acute ly ( 172) 1169 147.8 1.5e-35
XP_016882306 (OMIM: 151440) PREDICTED: protein lyl ( 302)  488 68.9 1.5e-11
NP_005574 (OMIM: 151440) protein lyl-1 [Homo sapie ( 280)  485 68.5 1.8e-11
XP_016882305 (OMIM: 151440) PREDICTED: protein lyl ( 351)  485 68.6 2.2e-11
XP_005259969 (OMIM: 151440) PREDICTED: protein lyl ( 206)  475 67.3 3.3e-11
NP_005412 (OMIM: 186855,613065) T-cell acute lymph ( 108)  346 52.0 6.8e-07


>>NP_001277333 (OMIM: 187040,613065) T-cell acute lympho  (331 aa)
 initn: 2243 init1: 2243 opt: 2243  Z-score: 1430.1  bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)

               10        20        30        40        50        60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
              250       260       270       280       290       300

              310       320       330 
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
       :::::::::::::::::::::::::::::::
NP_001 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
              310       320       330 

>>NP_001277332 (OMIM: 187040,613065) T-cell acute lympho  (331 aa)
 initn: 2243 init1: 2243 opt: 2243  Z-score: 1430.1  bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)

               10        20        30        40        50        60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
              250       260       270       280       290       300

              310       320       330 
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
       :::::::::::::::::::::::::::::::
NP_001 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
              310       320       330 

>>XP_016857678 (OMIM: 187040,613065) PREDICTED: T-cell a  (331 aa)
 initn: 2243 init1: 2243 opt: 2243  Z-score: 1430.1  bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)

               10        20        30        40        50        60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
              250       260       270       280       290       300

              310       320       330 
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
       :::::::::::::::::::::::::::::::
XP_016 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
              310       320       330 

>>XP_016857677 (OMIM: 187040,613065) PREDICTED: T-cell a  (331 aa)
 initn: 2243 init1: 2243 opt: 2243  Z-score: 1430.1  bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)

               10        20        30        40        50        60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
              250       260       270       280       290       300

              310       320       330 
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
       :::::::::::::::::::::::::::::::
XP_016 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
              310       320       330 

>>NP_001274276 (OMIM: 187040,613065) T-cell acute lympho  (331 aa)
 initn: 2243 init1: 2243 opt: 2243  Z-score: 1430.1  bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)

               10        20        30        40        50        60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
              250       260       270       280       290       300

              310       320       330 
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
       :::::::::::::::::::::::::::::::
NP_001 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
              310       320       330 

>>NP_001277334 (OMIM: 187040,613065) T-cell acute lympho  (331 aa)
 initn: 2243 init1: 2243 opt: 2243  Z-score: 1430.1  bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)

               10        20        30        40        50        60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
              250       260       270       280       290       300

              310       320       330 
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
       :::::::::::::::::::::::::::::::
NP_001 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
              310       320       330 

>>NP_003180 (OMIM: 187040,613065) T-cell acute lymphocyt  (331 aa)
 initn: 2243 init1: 2243 opt: 2243  Z-score: 1430.1  bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)

               10        20        30        40        50        60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
              250       260       270       280       290       300

              310       320       330 
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
       :::::::::::::::::::::::::::::::
NP_003 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
              310       320       330 

>>XP_016857680 (OMIM: 187040,613065) PREDICTED: T-cell a  (331 aa)
 initn: 2243 init1: 2243 opt: 2243  Z-score: 1430.1  bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)

               10        20        30        40        50        60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
              250       260       270       280       290       300

              310       320       330 
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
       :::::::::::::::::::::::::::::::
XP_016 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
              310       320       330 

>>XP_016857679 (OMIM: 187040,613065) PREDICTED: T-cell a  (331 aa)
 initn: 2243 init1: 2243 opt: 2243  Z-score: 1430.1  bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)

               10        20        30        40        50        60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
              250       260       270       280       290       300

              310       320       330 
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
       :::::::::::::::::::::::::::::::
XP_016 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
              310       320       330 

>>XP_005271217 (OMIM: 187040,613065) PREDICTED: T-cell a  (331 aa)
 initn: 2243 init1: 2243 opt: 2243  Z-score: 1430.1  bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)

               10        20        30        40        50        60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
              250       260       270       280       290       300

              310       320       330 
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
       :::::::::::::::::::::::::::::::
XP_005 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
              310       320       330 




331 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 03:59:48 2016 done: Fri Nov  4 03:59:50 2016
 Total Scan time:  9.960 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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