Result of FASTA (omim) for pF1KB5484
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5484, 650 aa
  1>>>pF1KB5484 650 - 650 aa - 650 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.6982+/-0.000305; mu= 10.7909+/- 0.019
 mean_var=171.6354+/-34.263, 0's: 0 Z-trim(122.9): 23  B-trim: 532 in 1/55
 Lambda= 0.097897
 statistics sampled from 41896 (41919) to 41896 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.8), E-opt: 0.2 (0.491), width:  16
 Scan time: 13.880

The best scores are:                                      opt bits E(85289)
NP_005157 (OMIM: 104775) amyloid-like protein 1 is ( 650) 4446 639.9 8.4e-183
NP_001019978 (OMIM: 104775) amyloid-like protein 1 ( 651) 4434 638.2 2.7e-182
XP_016882227 (OMIM: 104775) PREDICTED: amyloid-lik ( 597) 2522 368.1  5e-101
XP_016882226 (OMIM: 104775) PREDICTED: amyloid-lik ( 598) 2522 368.1  5e-101
NP_001315611 (OMIM: 104776) amyloid-like protein 2 ( 707)  801 125.1 8.4e-28
NP_001135749 (OMIM: 104776) amyloid-like protein 2 ( 695)  798 124.7 1.1e-27
NP_001315614 (OMIM: 104776) amyloid-like protein 2 ( 644)  779 122.0 6.7e-27
NP_001135750 (OMIM: 104776) amyloid-like protein 2 ( 522)  762 119.5   3e-26
NP_001315615 (OMIM: 104776) amyloid-like protein 2 ( 730)  764 119.9 3.2e-26
NP_001633 (OMIM: 104776) amyloid-like protein 2 is ( 763)  764 119.9 3.3e-26
NP_001135748 (OMIM: 104776) amyloid-like protein 2 ( 751)  761 119.5 4.4e-26
NP_001230228 (OMIM: 104776) amyloid-like protein 2 ( 761)  761 119.5 4.4e-26
NP_001315613 (OMIM: 104776) amyloid-like protein 2 ( 700)  742 116.8 2.7e-25
NP_001129601 (OMIM: 104300,104760,605714) amyloid  ( 639)  719 113.5 2.4e-24
NP_001129603 (OMIM: 104300,104760,605714) amyloid  ( 660)  719 113.5 2.4e-24
NP_001191232 (OMIM: 104300,104760,605714) amyloid  ( 677)  719 113.5 2.5e-24
NP_958817 (OMIM: 104300,104760,605714) amyloid bet ( 695)  719 113.6 2.5e-24
NP_001191231 (OMIM: 104300,104760,605714) amyloid  ( 733)  702 111.2 1.4e-23
NP_001129488 (OMIM: 104300,104760,605714) amyloid  ( 746)  702 111.2 1.4e-23
NP_958816 (OMIM: 104300,104760,605714) amyloid bet ( 751)  702 111.2 1.4e-23
NP_001129602 (OMIM: 104300,104760,605714) amyloid  ( 714)  683 108.5 8.8e-23
NP_001191230 (OMIM: 104300,104760,605714) amyloid  ( 752)  683 108.5 9.1e-23
NP_000475 (OMIM: 104300,104760,605714) amyloid bet ( 770)  683 108.5 9.3e-23


>>NP_005157 (OMIM: 104775) amyloid-like protein 1 isofor  (650 aa)
 initn: 4446 init1: 4446 opt: 4446  Z-score: 3402.9  bits: 639.9 E(85289): 8.4e-183
Smith-Waterman score: 4446; 100.0% identity (100.0% similar) in 650 aa overlap (1-650:1-650)

               10        20        30        40        50        60
pF1KB5 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSAQVAGLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSAQVAGLC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAIPMERWC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAIPMERWC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 GGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 CSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPGSRVEGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 CSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPGSRVEGA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 EDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGVDIYFGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGVDIYFGM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 PGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHFQSILQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHFQSILQT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 LEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALRRYLRAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALRRYLRAE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 QKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQELRPQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQELRPQ
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB5 IQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDAASPEKEKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 IQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDAASPEKEKM
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB5 NPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGSLIVLSM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGSLIVLSM
              550       560       570       580       590       600

              610       620       630       640       650
pF1KB5 LLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP
       ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP
              610       620       630       640       650

>>NP_001019978 (OMIM: 104775) amyloid-like protein 1 iso  (651 aa)
 initn: 3573 init1: 3573 opt: 4434  Z-score: 3393.7  bits: 638.2 E(85289): 2.7e-182
Smith-Waterman score: 4434; 99.8% identity (99.8% similar) in 651 aa overlap (1-650:1-651)

               10        20        30        40        50        60
pF1KB5 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSAQVAGLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSAQVAGLC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAIPMERWC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAIPMERWC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 GGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 CSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPGSRVEGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPGSRVEGA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 EDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGVDIYFGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGVDIYFGM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 PGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHFQSILQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHFQSILQT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 LEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALRRYLRAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALRRYLRAE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 QKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQELRPQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQELRPQ
              430       440       450       460       470       480

              490       500       510        520       530         
pF1KB5 IQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKD-DTPMTLPKGSTEQDAASPEKEK
       ::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
NP_001 IQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDADTPMTLPKGSTEQDAASPEKEK
              490       500       510       520       530       540

     540       550       560       570       580       590         
pF1KB5 MNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGSLIVLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGSLIVLS
              550       560       570       580       590       600

     600       610       620       630       640       650
pF1KB5 MLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP
              610       620       630       640       650 

>>XP_016882227 (OMIM: 104775) PREDICTED: amyloid-like pr  (597 aa)
 initn: 2491 init1: 2491 opt: 2522  Z-score: 1934.8  bits: 368.1 E(85289): 5e-101
Smith-Waterman score: 3996; 91.8% identity (91.8% similar) in 650 aa overlap (1-650:1-597)

               10        20        30        40        50        60
pF1KB5 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSAQVAGLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSAQVAGLC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAIPMERWC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAIPMERWC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 GGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 CSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPGSRVEGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPGSRVEGA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 EDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGVDIYFGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGVDIYFGM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 PGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHFQSILQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::        
XP_016 PGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNE--------
              310       320       330       340       350          

              370       380       390       400       410       420
pF1KB5 LEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALRRYLRAE
                                                    :::::::::::::::
XP_016 ---------------------------------------------AERVLLALRRYLRAE
                                                         360       

              430       440       450       460       470       480
pF1KB5 QKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQELRPQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQELRPQ
       370       380       390       400       410       420       

              490       500       510       520       530       540
pF1KB5 IQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDAASPEKEKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDAASPEKEKM
       430       440       450       460       470       480       

              550       560       570       580       590       600
pF1KB5 NPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGSLIVLSM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGSLIVLSM
       490       500       510       520       530       540       

              610       620       630       640       650
pF1KB5 LLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP
       ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP
       550       560       570       580       590       

>>XP_016882226 (OMIM: 104775) PREDICTED: amyloid-like pr  (598 aa)
 initn: 3357 init1: 2492 opt: 2522  Z-score: 1934.8  bits: 368.1 E(85289): 5e-101
Smith-Waterman score: 3984; 91.7% identity (91.7% similar) in 651 aa overlap (1-650:1-598)

               10        20        30        40        50        60
pF1KB5 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSAQVAGLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSAQVAGLC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAIPMERWC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAIPMERWC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 GGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 CSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPGSRVEGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPGSRVEGA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 EDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGVDIYFGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGVDIYFGM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 PGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHFQSILQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::        
XP_016 PGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNE--------
              310       320       330       340       350          

              370       380       390       400       410       420
pF1KB5 LEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALRRYLRAE
                                                    :::::::::::::::
XP_016 ---------------------------------------------AERVLLALRRYLRAE
                                                         360       

              430       440       450       460       470       480
pF1KB5 QKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQELRPQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQELRPQ
       370       380       390       400       410       420       

              490       500       510        520       530         
pF1KB5 IQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKD-DTPMTLPKGSTEQDAASPEKEK
       ::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
XP_016 IQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDADTPMTLPKGSTEQDAASPEKEK
       430       440       450       460       470       480       

     540       550       560       570       580       590         
pF1KB5 MNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGSLIVLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGSLIVLS
       490       500       510       520       530       540       

     600       610       620       630       640       650
pF1KB5 MLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP
       :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP
       550       560       570       580       590        

>>NP_001315611 (OMIM: 104776) amyloid-like protein 2 iso  (707 aa)
 initn: 1612 init1: 768 opt: 801  Z-score: 620.2  bits: 125.1 E(85289): 8.4e-28
Smith-Waterman score: 1603; 40.5% identity (68.8% similar) in 696 aa overlap (23-648:15-704)

               10        20        30        40              50    
pF1KB5 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAG------GSPGAAEAPGSA
                             :: :::. : : ::. .:::      .. :.. : .  
NP_001         MAATGTAAAAATGRLLLLLLVGLTA-PAL-ALAGYIEALAANAGTGFAVAEP
                       10        20          30        40        50

           60        70        80        90       100       110    
pF1KB5 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI
       :.: .::.:..: ...::.:::::  .. :..  ..::.::..:::::::. : .:.: .
NP_001 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV
               60        70        80        90       100       110

          120       130       140       150       160       170    
pF1KB5 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH
        .. ::  ... .:    . :.::.:: :::::..::::: :.:.:.:::. ::.  . :
NP_001 SIDNWCRRDKK-QCK--SRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWH
              120          130       140       150       160       

          180       190       200       210                 220    
pF1KB5 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPP---GT-------PDPSGTAVG
         ..::: .::. :.. ::::::: :.:.:.::::::     :.        :       
NP_001 TVVKEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEE
       170       180       190       200       210       220       

                      230       240       250         260       270
pF1KB5 D------------PSTRSWPPGSRVEGAEDEEEEESFPQPVDD--YFVEPPQAEEEEETV
       :            :.  .    ...   ::.:.::   . :.:  :. .  .... .:  
NP_001 DEEEDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEEN
       230       240       250       260       270       280       

                   280         290       300       310       320   
pF1KB5 P--PPSSHTLA---VVG--KVTPTPRPTDGVDIYFGMPGEISEHEGFLRAKMDLEERRMR
       :  : :. :..   ..   :: ::: ::. ::.::   .. .::  : .:: .:: :.  
NP_001 PTEPGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRN
       290       300       310       320       330       340       

           330       340       350       360       370       380   
pF1KB5 QINEVMREWAMADNQSKNLPKADRQALNEHFQSILQTLEEQVSGERQRLVETHATRVIAL
       ....: .::  :. :.::::::.::.: .:::.....::.....:.:.::::: .:: :.
NP_001 RMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAM
       350       360       370       380       390       400       

           390       400       410       420       430       440   
pF1KB5 INDQRRAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQ
       .::.:: :::..:::::.:::. .:.: :::::.:::.:.. ::.:::::: ::::::: 
NP_001 LNDRRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAA
       410       420       430       440       450       460       

           450       460       470       480       490          500
pF1KB5 QMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQELRPQIQELLHSEHLGPSELEAP---AP
       ::. :: :::.::::: ::::.:: . :..:::.. .:.:::. ..   ... :    .:
NP_001 QMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETP
       470       480       490       500       510       520       

                 510                 520            530         540
pF1KB5 GG---SSEDKGGLQP----------PDSKDDTP---MTLPKGST--EQDAA--SPEKEKM
            :::..  . :          :...:  :     . :::   :::..  . :.. .
NP_001 VDVRVSSEESEEIPPFHPFHPFPALPENEDTQPELYHPMKKGSGVGEQDGGLIGAEEKVI
       530       540       550       560       570       580       

                550        560            570         580       590
pF1KB5 NPLEQYERK--VNASVP-RGFPFHSSEI-----QRDELAP--AGTGVSREAVSGLLIMGA
       :  .. ...  .. ..  . . :.. ..     .:. ..:     ..:  :. :::....
NP_001 NSKNKVDENMVIDETLDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAV
       590       600       610       620       630       640       

              600       610       620       630       640       650
pF1KB5 GGGSLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP
       . ...::.:...:: :. ::.::::.:::::::: ::..: ..: ::::::::..::.  
NP_001 AIATVIVISLVMLR-KRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQ
       650       660        670       680       690       700      

NP_001 I
        

>>NP_001135749 (OMIM: 104776) amyloid-like protein 2 iso  (695 aa)
 initn: 1612 init1: 768 opt: 798  Z-score: 618.0  bits: 124.7 E(85289): 1.1e-27
Smith-Waterman score: 1602; 40.6% identity (69.3% similar) in 684 aa overlap (23-648:15-692)

               10        20        30        40              50    
pF1KB5 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAG------GSPGAAEAPGSA
                             :: :::. : : ::. .:::      .. :.. : .  
NP_001         MAATGTAAAAATGRLLLLLLVGLTA-PAL-ALAGYIEALAANAGTGFAVAEP
                       10        20          30        40        50

           60        70        80        90       100       110    
pF1KB5 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI
       :.: .::.:..: ...::.:::::  .. :..  ..::.::..:::::::. : .:.: .
NP_001 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV
               60        70        80        90       100       110

          120       130       140       150       160       170    
pF1KB5 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH
        .. ::  ... .:    . :.::.:: :::::..::::: :.:.:.:::. ::.  . :
NP_001 SIDNWCRRDKK-QCK--SRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWH
              120          130       140       150       160       

          180       190       200       210                 220    
pF1KB5 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPP---GT-------PDPSGTAVG
         ..::: .::. :.. ::::::: :.:.:.::::::     :.        :       
NP_001 TVVKEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEE
       170       180       190       200       210       220       

                      230       240       250         260       270
pF1KB5 D------------PSTRSWPPGSRVEGAEDEEEEESFPQPVDD--YFVEPPQAEEEEETV
       :            :.  .    ...   ::.:.::   . :.:  :. .  .... .:  
NP_001 DEEEDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEEN
       230       240       250       260       270       280       

                   280         290       300       310       320   
pF1KB5 P--PPSSHTLA---VVG--KVTPTPRPTDGVDIYFGMPGEISEHEGFLRAKMDLEERRMR
       :  : :. :..   ..   :: ::: ::. ::.::   .. .::  : .:: .:: :.  
NP_001 PTEPGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRN
       290       300       310       320       330       340       

           330       340       350       360       370       380   
pF1KB5 QINEVMREWAMADNQSKNLPKADRQALNEHFQSILQTLEEQVSGERQRLVETHATRVIAL
       ....: .::  :. :.::::::.::.: .:::.....::.....:.:.::::: .:: :.
NP_001 RMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAM
       350       360       370       380       390       400       

           390       400       410       420       430       440   
pF1KB5 INDQRRAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQ
       .::.:: :::..:::::.:::. .:.: :::::.:::.:.. ::.:::::: ::::::: 
NP_001 LNDRRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAA
       410       420       430       440       450       460       

           450       460       470       480       490             
pF1KB5 QMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQELRPQIQELLHSEHLGPSEL-----EAP
       ::. :: :::.::::: ::::.:: . :..:::.. .:.:::. ..   ...     :.:
NP_001 QMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETP
       470       480       490       500       510       520       

      500       510       520           530         540         550
pF1KB5 APGGSSEDKGGLQPPDSKDDTPMTLPK----GSTEQDAA--SPEKEKMNPLEQYERK--V
       .    : ...   ::        .::.    :  :::..  . :.. .:  .. ...  .
NP_001 VDVRVSSEESEEIPPFHPFHPFPALPENEGSGVGEQDGGLIGAEEKVINSKNKVDENMVI
       530       540       550       560       570       580       

               560            570         580       590       600  
pF1KB5 NASVP-RGFPFHSSEI-----QRDELAP--AGTGVSREAVSGLLIMGAGGGSLIVLSMLL
       . ..  . . :.. ..     .:. ..:     ..:  :. :::..... ...::.:...
NP_001 DETLDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVM
       590       600       610       620       630       640       

            610       620       630       640       650 
pF1KB5 LRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP 
       :: :. ::.::::.:::::::: ::..: ..: ::::::::..::.   
NP_001 LR-KRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI
        650       660       670       680       690     

>>NP_001315614 (OMIM: 104776) amyloid-like protein 2 iso  (644 aa)
 initn: 1387 init1: 749 opt: 779  Z-score: 603.9  bits: 122.0 E(85289): 6.7e-27
Smith-Waterman score: 1564; 41.8% identity (67.7% similar) in 665 aa overlap (23-648:15-641)

               10        20        30        40              50    
pF1KB5 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAG------GSPGAAEAPGSA
                             :: :::. : : ::. .:::      .. :.. : .  
NP_001         MAATGTAAAAATGRLLLLLLVGLTA-PAL-ALAGYIEALAANAGTGFAVAEP
                       10        20          30        40        50

           60        70        80        90       100       110    
pF1KB5 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI
       :.: .::.:..: ...::.:::::  .. :..  ..::.::..:::::::. : .:.: .
NP_001 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV
               60        70        80        90       100       110

          120       130       140       150       160       170    
pF1KB5 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH
        .. ::  ... .:    . :.::.:: :::::..::::: :.:.:.:::. ::.  . :
NP_001 SIDNWCRRDKK-QCK--SRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWH
              120          130       140       150       160       

          180       190       200       210                 220    
pF1KB5 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPP---GT-------PDPSGTAVG
         ..::: .::. :.. ::::::: :.:.:.::::::     :.        :       
NP_001 TVVKEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEE
       170       180       190       200       210       220       

                      230       240       250         260       270
pF1KB5 D------------PSTRSWPPGSRVEGAEDEEEEESFPQPVDD--YFVEPPQAEEEEETV
       :            :.  .    ...   ::.:.::   . :.:  :. .  .... .:  
NP_001 DEEEDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEEN
       230       240       250       260       270       280       

                   280         290       300       310       320   
pF1KB5 P--PPSSHTLA---VVG--KVTPTPRPTDGVDIYFGMPGEISEHEGFLRAKMDLEERRMR
       :  : :. :..   ..   :: ::: ::. ::.::   .. .::  : .:: .:: :.  
NP_001 PTEPGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRN
       290       300       310       320       330       340       

           330       340       350       360       370       380   
pF1KB5 QINEVMREWAMADNQSKNLPKADRQALNEHFQSILQTLEEQVSGERQRLVETHATRVIAL
       ....: .::  :. :.::::::.::.: .:::.....::.....:.:.::::: .:: :.
NP_001 RMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAM
       350       360       370       380       390       400       

           390       400       410       420       430       440   
pF1KB5 INDQRRAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQ
       .::.:: :::..:::::.:::. .:.: :::::.:::.:.. ::.:::::: ::::::: 
NP_001 LNDRRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAA
       410       420       430       440       450       460       

           450       460       470       480       490       500   
pF1KB5 QMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQELRPQIQELLHSEHLGPSELEAPAPGGS
       ::. :: :::.::::: ::::.:: . :..:::    ::: . :              : 
NP_001 QMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQE----IQEEIGS--------------GV
       470       480       490       500                           

           510       520       530       540       550       560   
pF1KB5 SEDKGGLQPPDSKDDTPMTLPKGSTEQDAASPEKEKMNPLEQYERKVNASVPRGFPFHSS
       .:. :::   . :    .   :...... .  :      :.  :   ::    :.     
NP_001 GEQDGGLIGAEEK----VINSKNKVDENMVIDET-----LDVKEMIFNAERVGGL-----
     510       520           530            540       550          

           570         580       590       600       610       620 
pF1KB5 EIQRDELAP--AGTGVSREAVSGLLIMGAGGGSLIVLSMLLLRRKKPYGAISHGVVEVDP
       : .:. ..:     ..:  :. :::..... ...::.:...:: :. ::.::::.:::::
NP_001 EEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLR-KRQYGTISHGIVEVDP
         560       570       580       590        600       610    

             630       640       650 
pF1KB5 MLTLEEQQLRELQRHGYENPTYRFLEERP 
       ::: ::..: ..: ::::::::..::.   
NP_001 MLTPEERHLNKMQNHGYENPTYKYLEQMQI
          620       630       640    

>>NP_001135750 (OMIM: 104776) amyloid-like protein 2 iso  (522 aa)
 initn: 1253 init1: 762 opt: 762  Z-score: 592.2  bits: 119.5 E(85289): 3e-26
Smith-Waterman score: 1023; 33.7% identity (57.7% similar) in 653 aa overlap (23-648:15-519)

               10        20        30        40              50    
pF1KB5 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAG------GSPGAAEAPGSA
                             :: :::. : : ::. .:::      .. :.. : .  
NP_001         MAATGTAAAAATGRLLLLLLVGLTA-PAL-ALAGYIEALAANAGTGFAVAEP
                       10        20          30        40        50

           60        70        80        90       100       110    
pF1KB5 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI
       :.: .::.:..: ...::.:::::  .. :..  ..::.::..:::::::. : .:.: .
NP_001 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV
               60        70        80        90       100       110

          120       130       140       150       160       170    
pF1KB5 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH
        .. ::  ... .:    . :.::.::          ::                     
NP_001 SIDNWCRRDKK-QCKS--RFVTPFKCL----------VP---------------------
              120          130                                     

          180       190       200       210       220       230    
pF1KB5 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG
                                                                   
NP_001 ------------------------------------------------------------
                                                                   

          240       250       260       270       280       290    
pF1KB5 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGV
                                                          ::: ::. :
NP_001 ---------------------------------------------------PTPLPTNDV
                                                           140     

          300       310       320       330       340       350    
pF1KB5 DIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHF
       :.::   .. .::  : .:: .:: :.  ....: .::  :. :.::::::.::.: .::
NP_001 DVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHF
         150       160       170       180       190       200     

          360       370       380       390       400       410    
pF1KB5 QSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALR
       :.....::.....:.:.::::: .:: :..::.:: :::..:::::.:::. .:.: :::
NP_001 QAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAALQSDPPRPHRILQALR
         210       220       230       240       250       260     

          420       430       440       450       460       470    
pF1KB5 RYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLA
       ::.:::.:.. ::.:::::: ::::::: ::. :: :::.::::: ::::.:: . :..:
NP_001 RYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVA
         270       280       290       300       310       320     

          480       490            500       510       520         
pF1KB5 QELRPQIQELLHSEHLGPSEL-----EAPAPGGSSEDKGGLQPPDSKDDTPMTLPK----
       ::.. .:.:::. ..   ...     :.:.    : ...   ::        .::.    
NP_001 QEIQEEIDELLQEQRADMDQFTASISETPVDVRVSSEESEEIPPFHPFHPFPALPENEGS
         330       340       350       360       370       380     

         530         540         550        560            570     
pF1KB5 GSTEQDAA--SPEKEKMNPLEQYERK--VNASVP-RGFPFHSSEI-----QRDELAP--A
       :  :::..  . :.. .:  .. ...  .. ..  . . :.. ..     .:. ..:   
NP_001 GVGEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEERESVGPLRE
         390       400       410       420       430       440     

           580       590       600       610       620       630   
pF1KB5 GTGVSREAVSGLLIMGAGGGSLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLREL
         ..:  :. :::..... ...::.:...:: :. ::.::::.:::::::: ::..: ..
NP_001 DFSLSSSALIGLLVIAVAIATVIVISLVMLR-KRQYGTISHGIVEVDPMLTPEERHLNKM
         450       460       470        480       490       500    

           640       650 
pF1KB5 QRHGYENPTYRFLEERP 
       : ::::::::..::.   
NP_001 QNHGYENPTYKYLEQMQI
          510       520  

>>NP_001315615 (OMIM: 104776) amyloid-like protein 2 iso  (730 aa)
 initn: 1418 init1: 761 opt: 764  Z-score: 591.7  bits: 119.9 E(85289): 3.2e-26
Smith-Waterman score: 1321; 35.9% identity (63.7% similar) in 716 aa overlap (26-648:17-727)

               10        20        30        40              50    
pF1KB5 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAG------GSPGAAEAPGSA
                                ::::.  . ::. .:::      .. :.. : .  
NP_001          MAATGTAAAAATGRLLLLLLVGLTAPAL-ALAGYIEALAANAGTGFAVAEP
                        10        20         30        40        50

           60        70        80        90       100       110    
pF1KB5 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI
       :.: .::.:..: ...::.:::::  .. :..  ..::.::..:::::::. : .:.: .
NP_001 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV
               60        70        80        90       100       110

          120       130       140       150       160       170    
pF1KB5 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH
        .. ::  ... .:    . :.::.:: :::::..::::: :.:.:.:::. ::.  . :
NP_001 SIDNWCRRDKK-QCK--SRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWH
              120          130       140       150       160       

          180         190       200       210       220         230
pF1KB5 QEAQEA--CSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSG--TAVGDPSTRS
         ..:.   .: .   .          :. .  .      :   :      :. : . ..
NP_001 TVVKETKIIGSVSKEEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLEDFTEAAVDEDDED
       170       180       190       200       210       220       

               240               250       260             270     
pF1KB5 WPPGSRV-EGAE--------DEEEEESFPQPVDDYFVEPPQAEEE------EETVPPPS-
          : .: :  .        :. .::.  .: .:  .   .  ..      .:..  :  
NP_001 EEEGEEVVEDRDYYYDTFKGDDYNEENPTEPGSDGTMSDKEITHDVKAVCSQEAMTGPCR
       230       240       250       260       270       280       

                                           280        290       300
pF1KB5 ---------------------------------SHTLAVV-GKVTPTPRPTDGVDIYFGM
                                        .. .::  . . ::: ::. ::.::  
NP_001 AVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIPPTPLPTNDVDVYFET
       290       300       310       320       330       340       

              310       320       330       340       350       360
pF1KB5 PGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHFQSILQT
        .. .::  : .:: .:: :.  ....: .::  :. :.::::::.::.: .:::.....
NP_001 SADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKA
       350       360       370       380       390       400       

              370       380       390       400       410       420
pF1KB5 LEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALRRYLRAE
       ::.....:.:.::::: .:: :..::.:: :::..:::::.:::. .:.: :::::.:::
NP_001 LEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAALQSDPPRPHRILQALRRYVRAE
       410       420       430       440       450       460       

              430       440       450       460       470       480
pF1KB5 QKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQELRPQ
       .:.. ::.:::::: ::::::: ::. :: :::.::::: ::::.:: . :..:::.. .
NP_001 NKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEE
       470       480       490       500       510       520       

              490          500          510                 520    
pF1KB5 IQELLHSEHLGPSELEAP---APGG---SSEDKGGLQP----------PDSKDDTP---M
       :.:::. ..   ... :    .:     :::..  . :          :...:  :    
NP_001 IDELLQEQRADMDQFTASISETPVDVRVSSEESEEIPPFHPFHPFPALPENEDTQPELYH
       530       540       550       560       570       580       

               530         540         550        560              
pF1KB5 TLPKGST--EQDAA--SPEKEKMNPLEQYERK--VNASVP-RGFPFHSSEI-----QRDE
        . :::   :::..  . :.. .:  .. ...  .. ..  . . :.. ..     .:. 
NP_001 PMKKGSGVGEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEERES
       590       600       610       620       630       640       

     570         580       590       600       610       620       
pF1KB5 LAP--AGTGVSREAVSGLLIMGAGGGSLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEE
       ..:     ..:  :. :::..... ...::.:...:: :. ::.::::.:::::::: ::
NP_001 VGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLR-KRQYGTISHGIVEVDPMLTPEE
       650       660       670       680        690       700      

       630       640       650 
pF1KB5 QQLRELQRHGYENPTYRFLEERP 
       ..: ..: ::::::::..::.   
NP_001 RHLNKMQNHGYENPTYKYLEQMQI
        710       720       730

>>NP_001633 (OMIM: 104776) amyloid-like protein 2 isofor  (763 aa)
 initn: 1605 init1: 761 opt: 764  Z-score: 591.5  bits: 119.9 E(85289): 3.3e-26
Smith-Waterman score: 1474; 37.8% identity (64.0% similar) in 714 aa overlap (55-648:51-760)

           30        40        50        60        70        80    
pF1KB5 PLLLLLLRAQPAIGSLAGGSPGAAEAPGSAQVAGLCGRLTLHRDLRTGRWEPDPQRSRRC
                                     :.: .::.:..: ...::.:::::  .. :
NP_001 VGLTAPALALAGYIEALAANAGTGFAVAEPQIAMFCGKLNMHVNIQTGKWEPDPTGTKSC
               30        40        50        60        70        80

           90       100       110       120       130       140    
pF1KB5 LRDPQRVLEYCRQMYPELQIARVEQATQAIPMERWCGGSRSGSCAHPHHQVVPFRCLPGE
       ..  ..::.::..:::::::. : .:.: . .. ::  ... .:      :.::.:: ::
NP_001 FETKEEVLQYCQEMYPELQITNVMEANQRVSIDNWCRRDKK-QCKSRF--VTPFKCLVGE
               90       100       110       120          130       

          150       160       170       180       190       200    
pF1KB5 FVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEACSSQGLILHGSGMLLPCGSDRFRG
       :::..::::: :.:.:.:::. ::.  . :  ..::: .::. :.. ::::::: :.:.:
NP_001 FVSDVLLVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGMTLYSYGMLLPCGVDQFHG
       140       150       160       170       180       190       

          210                       220       230             240  
pF1KB5 VEYVCCPPP---GT-------------PDPSGTAVGDPSTRSWPPGSRVEG------AED
       .::::::     :.              . .     :     .:  . .:        ::
NP_001 TEYVCCPQTKIIGSVSKEEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLEDFTEAAVDED
       200       210       220       230       240       250       

            250         260       270                              
pF1KB5 EEEEESFPQPVDD--YFVEPPQAEEEEETVP--PPSSHTL--------------------
       .:.::   . :.:  :. .  .... .:  :  : :. :.                    
NP_001 DEDEEEGEEVVEDRDYYYDTFKGDDYNEENPTEPGSDGTMSDKEITHDVKAVCSQEAMTG
       260       270       280       290       300       310       

         280                                             290       
pF1KB5 ---AVV---------GK-----------------------------VTPTPRPTDGVDIY
          ::.         ::                             . ::: ::. ::.:
NP_001 PCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIPPTPLPTNDVDVY
       320       330       340       350       360       370       

       300       310       320       330       340       350       
pF1KB5 FGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHFQSI
       :   .. .::  : .:: .:: :.  ....: .::  :. :.::::::.::.: .:::..
NP_001 FETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAM
       380       390       400       410       420       430       

       360       370       380       390       400       410       
pF1KB5 LQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALRRYL
       ...::.....:.:.::::: .:: :..::.:: :::..:::::.:::. .:.: :::::.
NP_001 VKALEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAALQSDPPRPHRILQALRRYV
       440       450       460       470       480       490       

       420       430       440       450       460       470       
pF1KB5 RAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQEL
       :::.:.. ::.:::::: ::::::: ::. :: :::.::::: ::::.:: . :..:::.
NP_001 RAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEI
       500       510       520       530       540       550       

       480       490          500          510                 520 
pF1KB5 RPQIQELLHSEHLGPSELEAP---APGG---SSEDKGGLQP----------PDSKDDTP-
       . .:.:::. ..   ... :    .:     :::..  . :          :...:  : 
NP_001 QEEIDELLQEQRADMDQFTASISETPVDVRVSSEESEEIPPFHPFHPFPALPENEDTQPE
       560       570       580       590       600       610       

                  530         540         550        560           
pF1KB5 --MTLPKGST--EQDAA--SPEKEKMNPLEQYERK--VNASVP-RGFPFHSSEI-----Q
           . :::   :::..  . :.. .:  .. ...  .. ..  . . :.. ..     .
NP_001 LYHPMKKGSGVGEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEE
       620       630       640       650       660       670       

        570         580       590       600       610       620    
pF1KB5 RDELAP--AGTGVSREAVSGLLIMGAGGGSLIVLSMLLLRRKKPYGAISHGVVEVDPMLT
       :. ..:     ..:  :. :::..... ...::.:...:: :. ::.::::.::::::::
NP_001 RESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLR-KRQYGTISHGIVEVDPMLT
       680       690       700       710        720       730      

          630       640       650 
pF1KB5 LEEQQLRELQRHGYENPTYRFLEERP 
        ::..: ..: ::::::::..::.   
NP_001 PEERHLNKMQNHGYENPTYKYLEQMQI
        740       750       760   




650 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 03:49:17 2016 done: Fri Nov  4 03:49:19 2016
 Total Scan time: 13.880 Total Display time:  0.150

Function used was FASTA [36.3.4 Apr, 2011]
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