GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:45:11

Sequence gi568815597r:8761363_8974908 : 213546 bp : 46.39% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  37912  38095  184  0  1   83   72   110 0.713   8.18
 1.02 Intr +  55742  55856  115  0  1   67  -23   110 0.012  -2.69
 1.03 Term +  69751  69877  127  1  1  109   49   219 0.997  17.86
 1.04 PlyA +  71878  71883    6                               1.05

 2.00 Prom +  75327  75366   40                              -5.16
 2.01 Init +  75525  75527    3  2  0  113   22     0 0.339  -4.10
 2.02 Intr +  77169  77277  109  2  1   95  123    28 0.523   6.86
 2.03 Intr +  84718  84745   28  2  1  135   75   -10 0.419  -0.43
 2.04 Intr +  87416  87552  137  2  2   76   50    81 0.676   3.31
 2.05 Term +  87564  87796  233  1  2   44   37   151 0.785   2.24
 2.06 PlyA +  87822  87827    6                               1.05

 3.12 PlyA -  91259  91254    6                               1.05
 3.11 Term - 100067  99998   70  1  1   95   43    63 0.699  -0.09
 3.10 Intr - 101583 101525   59  0  2   90  110    63 0.987   6.38
 3.09 Intr - 101981 101873  109  1  1   82  110   140 0.999  15.89
 3.08 Intr - 102730 102529  202  2  1   74   88   351 0.996  32.04
 3.07 Intr - 104120 103923  198  0  0   85  109   416 0.999  42.72
 3.06 Intr - 105139 104917  223  1  1  110   98   329 0.998  33.80
 3.05 Intr - 105888 105755  134  1  2  112  117   150 0.998  20.66
 3.04 Intr - 106695 106626   70  0  1  122   82   117 0.969  13.25
 3.03 Intr - 109148 109090   59  0  2  108   97   -11 0.771   0.40
 3.02 Intr - 110624 110529   96  0  0   98   98   124 0.999  14.38
 3.01 Init - 113579 113462  118  2  1   84   95    43 0.636   4.96
 3.00 Prom - 114603 114564   40                              -2.86

 4.03 PlyA - 114963 114958    6                               1.05
 4.02 Term - 116683 116535  149  2  2   35   34   112 0.946  -1.44
 4.01 Init - 116763 116685   79  0  1   89   68   114 0.985   8.72
 4.00 Prom - 118462 118423   40                              -2.56

 5.00 Prom + 125395 125434   40                              -4.96
 5.01 Sngl + 132006 132419  414  2  0   27   45   418 0.625  27.70
 5.02 PlyA + 133213 133218    6                               1.05

 6.03 PlyA - 133316 133311    6                               1.05
 6.02 Term - 147309 147168  142  2  1   74   47   103 0.049   2.20
 6.01 Init - 160192 160104   89  1  2   96   99   118 0.380  12.55
 6.00 Prom - 177527 177488   40                              -0.76

 7.00 Prom + 182786 182825   40                              -1.76
 7.01 Init + 184525 184603   79  0  1   96   99   164 0.931  17.54
 7.02 Intr + 187901 188080  180  0  0   80  110   156 0.931  16.84
 7.03 Intr + 195775 195923  149  2  2  102   67   177 0.916  16.95
 7.04 Intr + 197548 197640   93  0  0  114   99    99 0.996  13.76
 7.05 Intr + 201225 201294   70  2  1  132  110    83 0.998  13.65
 7.06 Intr + 206297 206454  158  0  2   99   95    93 0.949  10.83
 7.07 Intr + 209505 209619  115  2  1   99   96   142 0.777  16.12
 7.08 Term + 213260 213342   83  0  2   99   55    39 0.085  -0.44
 7.09 PlyA + 213492 213497    6                              -1.95


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 141515 141444   72  2  0  100   38    56 0.882  -0.29


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:8761363_8974908|GENSCAN_predicted_peptide_1|141_aa
MDHRAPPKIKSFVKVYNYYHLMPIRCSVDIPLEKTLINKDVFREAALKCKVTERPGSSSK
RGRGAKKESTRPGAGKLDTYLPLKRYTINSEVFAAQLRGKLDHYAIIKFPLTTESAMKME
DNNTLVLIVDVKANNTKSNRL

>gi568815597r:8761363_8974908|GENSCAN_predicted_CDS_1|426_bp
atggaccaccgcgccccgccaaagatcaagtcttttgtgaaagtttataactactatcac
ctcatgcccataaggtgctccgtggatatccccttggagaaaactctcatcaacaaggat
gtcttcagagaggctgctcttaaatgcaaggttactgagaggccagggtcaagttcaaag
agaggacgaggggccaaaaaagaaagcacacgacccggcgcgggcaagttggacacttac
cttcccctaaagcgctacaccatcaatagtgaggtgttcgcggcccagctccggggaaag
cttgaccactatgccatcatcaagttcccactgaccaccgagtctgctatgaagatggaa
gacaacaacacacttgtgttgattgtggatgttaaagccaacaacaccaagtcaaacagg
ctgtga

>gi568815597r:8761363_8974908|GENSCAN_predicted_peptide_2|169_aa
MDCFLGAKNHCGFSKDLGSPQDALHWISLAARYSFEVGRRQLETSEIICGDTGESVDKDV
LSGNLPLSSDSSIHLTELCPELWAGFTLALSPWYSPLATVNLRQPAGAGEKEGLGWQPAQ
PGSVQSQQLGEATEAQGLGAAPLRPLAAEGSSWARLDLDHQLTFCTVKE

>gi568815597r:8761363_8974908|GENSCAN_predicted_CDS_2|510_bp
atggactgttttctgggagcaaagaatcactgtggatttagcaaggaccttggaagcccc
caggatgctttacactggatttcattagctgcccggtattcctttgaggtcggaaggagg
caattagagacaagtgaaatcatctgcggtgacacaggagagagtgttgacaaggatgtg
ctgtccgggaatctccctttatccagtgacagctccattcatctcaccgagctttgccca
gagctctgggctggcttcactctggctctgagtccctggtacagtccacttgcaacagta
aacctgcgccagccagctggggctggagagaaggaagggctgggatggcagccagcccag
ccaggcagcgtgcagagccagcagctaggggaggccacggaggcccagggtcttggggca
gccccactgcgccccctggcggctgaaggaagctcctgggcgcgtctggacctggaccac
cagctgaccttctgcacagttaaagagtag

>gi568815597r:8761363_8974908|GENSCAN_predicted_peptide_3|445_aa
MNCVFLLQKFTMSILKIHAREIFDSRGNPTVEVDLFTSKGLFRAAVPSGASTGIYEALEL
RDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIEMDGTENKSKFGAN
AILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFM
ILPVGAANFREAMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEGLELLKT
AIGKAGYTDKVVIGMDVAASEFFRSGKYDLDFKSPDDPSRYISPDQLADLYKSFIKDYPV
VSIEDPFDQDDWGAWQKFTASAGIQVVGDDLTVTNPKRIAKAVNEKSCNCLLLKVNQIGS
VTESLQACKLAQANGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQ
LLRIEEELGSKAKFAGRNFRNPLAK

>gi568815597r:8761363_8974908|GENSCAN_predicted_CDS_3|1338_bp
atgaactgtgtgtttcttctacagaagttcaccatgtctattctcaagatccatgccagg
gagatctttgactctcgcgggaatcccactgttgaggttgatctcttcacctcaaaaggt
ctcttcagagctgctgtgcccagtggtgcttcaactggtatctatgaggccctagagctc
cgggacaatgataagactcgctatatggggaagggtgtctcaaaggctgttgagcacatc
aataaaactattgcgcctgccctggttagcaagaaactgaacgtcacagaacaagagaag
attgacaaactgatgatcgagatggatggaacagaaaataaatctaagtttggtgcgaac
gccattctgggggtgtcccttgccgtctgcaaagctggtgccgttgagaagggggtcccc
ctgtaccgccacatcgctgacttggctggcaactctgaagtcatcctgccagtcccggcg
ttcaatgtcatcaatggcggttctcatgctggcaacaagctggccatgcaggagttcatg
atcctcccagtcggtgcagcaaacttcagggaagccatgcgcattggagcagaggtttac
cacaacctgaagaatgtcatcaaggagaaatatgggaaagatgccaccaatgtgggggat
gaaggcgggtttgctcccaacatcctggagaataaagaaggcctggagctgctgaagact
gctattgggaaagctggctacactgataaggtggtcatcggcatggacgtagcggcctcc
gagttcttcaggtctgggaagtatgacctggacttcaagtctcccgatgaccccagcagg
tacatctcgcctgaccagctggctgacctgtacaagtccttcatcaaggactacccagtg
gtgtctatcgaagatccctttgaccaggatgactggggagcttggcagaagttcacagcc
agtgcaggaatccaggtagtgggggatgatctcacagtgaccaacccaaagaggatcgcc
aaggccgtgaacgagaagtcctgcaactgcctcctgctcaaagtcaaccagattggctcc
gtgaccgagtctcttcaggcgtgcaagctggcccaggccaatggttggggcgtcatggtg
tctcatcgttcgggggagactgaagataccttcatcgctgacctggttgtggggctgtgc
actgggcagatcaagactggtgccccttgccgatctgagcgcttggccaagtacaaccag
ctcctcagaattgaagaggagctgggcagcaaggctaagtttgccggcaggaacttcaga
aaccccttggccaagtaa

>gi568815597r:8761363_8974908|GENSCAN_predicted_peptide_4|75_aa
MATRLRPPPPPVAPASRPRSRPALLPISGDSFNSEKAPLEEPTAEPLDHWQVLQATSPKL
GKSGSPAGHQKSGLI

>gi568815597r:8761363_8974908|GENSCAN_predicted_CDS_4|228_bp
atggccacgaggctgcggccccctcccccaccggtagcccccgcctctcgcccgcgctcg
cggcccgcgcttctgcctataagcggtgactcatttaactccgagaaggcacctcttgag
gaacctacagcagagccgttagatcattggcaagtcctccaggcgacctcgcccaagttg
ggcaagagcggctccccggctggccaccaaaaatcgggcctgatctga

>gi568815597r:8761363_8974908|GENSCAN_predicted_peptide_5|137_aa
MLGETDLSNNKSLGRRRGENDPGTDQSPRAAASRVQHLHPATVTATTMPKRKAEGDAKGG
KAKVKDEPQRRSARLSAKPAPPKPEPKPKKTPAKKAEKVPKGKKGKADAGKEGNSPAESG
DAKTDQAQKAEGAGEAK

>gi568815597r:8761363_8974908|GENSCAN_predicted_CDS_5|414_bp
atgctcggggagactgatttgagtaataataaaagtctgggaagaagaagaggcgagaac
gaccccgggaccgaccaaagcccgcgcgccgccgcatcccgcgtacagcacctacatccc
gccaccgtcaccgccaccaccatgcccaagagaaaggctgaaggggatgctaaaggaggt
aaagccaaggtgaaggacgaaccacagagaaggtctgcaaggttgtctgctaaacctgct
cctccaaagccagagcccaagcctaaaaagacccctgcaaagaaggcagagaaggtaccc
aaagggaaaaagggaaaagctgatgctggtaaggaggggaatagccctgcagaaagtgga
gatgccaaaacagaccaggcccagaaagctgaaggtgctggagaggccaagtga

>gi568815597r:8761363_8974908|GENSCAN_predicted_peptide_6|76_aa
MEELKAWRLEEALDPALGLSGKKESVKDSSAAGLESPRLSWSRQAVPNMGAHIRVKGSPE
RQLENVKLNWRTPEYS

>gi568815597r:8761363_8974908|GENSCAN_predicted_CDS_6|231_bp
atggaggaactaaaggcctggaggctggaggaagcccttgacccagcgctgggtctttcg
ggcaagaaagagtcggtcaaggattccagtgccgccgggttagagtctccgcgactgagc
tggtctcggcaagcggtgcccaacatgggggctcacatccgggtcaaagggtcgccggag
cgacagttggagaacgtgaaactaaactggaggacacccgagtactcttaa

>gi568815597r:8761363_8974908|GENSCAN_predicted_peptide_7|308_aa
MRALVLLLSLFLLGGQAQHVSDWTYSEGALDEAHWPQHYPACGGQRQSPINLQRTKVRYN
PSLKGLNMTGYETQAGEFPMVNNGHTVQISLPSTMRMTVADGTVYIAQQMHFHWGGASSE
ISGSEHTVDGIRHVIEIHIVHYNSKYKSYDIAQDAPDGLAVLAAFVEVKNYPENTYYSNF
ISHLANIKYPGQRTTLTGLDVQDMLPRNLQHYYTYHGSLTTPPCTENVHWFVLADFVKLS
RTQVWKLENSLLDHRNKTIHNDYRRTQPLNHRVVESNFPNQEYTLGSEFQFYLHKIEEIL
DYLRRALN

>gi568815597r:8761363_8974908|GENSCAN_predicted_CDS_7|927_bp
atgagggccctggtgcttctgctgtccctgttcctgctgggtggccaggcccagcatgtg
tctgactggacctactcagaaggggcactggacgaagcgcactggccacagcactacccc
gcctgtgggggccagagacagtcgcctatcaacctacagaggacgaaggtgcggtacaac
ccctccttgaaggggctcaatatgacaggctatgagacccaggcaggggagttccccatg
gtcaacaatggccacacagtgcagatcagcctgccctccaccatgcgcatgacagtggct
gacggcactgtatacatagcccagcagatgcactttcactggggaggtgcgtcctcggag
atcagcggctctgagcacaccgtggacgggatcagacatgtgatcgagattcacattgtt
cactacaattctaaatacaagagctatgatatagcccaagatgcgccggatggtttggct
gtactggcagccttcgttgaggtgaagaattaccctgaaaacacttattacagcaacttc
atttctcatctggccaacatcaagtacccaggacaaagaacaaccctgactggccttgac
gttcaggacatgctgcccaggaacctccagcactactacacctaccatggctcactcacc
acgcctccctgcactgagaacgtccactggtttgtgctggcagattttgtcaagctctcc
aggacacaggtttggaagctggagaattccttactggatcaccgcaacaagaccatccac
aacgattaccgcaggacccagcccctgaaccacagagtggtggaatccaacttcccgaat
caggaatacactctaggctctgaattccagttttacctacataagattgaggaaattctt
gactacttaagaagagcattgaactga