Result of FASTA (omim) for pF1KB5377
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5377, 340 aa
  1>>>pF1KB5377 340 - 340 aa - 340 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7334+/-0.00032; mu= 15.6427+/- 0.020
 mean_var=96.6471+/-19.369, 0's: 0 Z-trim(118.4): 114  B-trim: 0 in 0/54
 Lambda= 0.130461
 statistics sampled from 31287 (31408) to 31287 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.368), width:  16
 Scan time:  8.350

The best scores are:                                      opt bits E(85289)
NP_006136 (OMIM: 604572) dnaJ homolog subfamily B  ( 340) 2322 446.9 2.9e-125
XP_006722796 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240) 1639 318.2 1.1e-86
NP_001300893 (OMIM: 604572) dnaJ homolog subfamily ( 240) 1639 318.2 1.1e-86
NP_001287843 (OMIM: 604572) dnaJ homolog subfamily ( 240) 1639 318.2 1.1e-86
XP_011526258 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240) 1639 318.2 1.1e-86
XP_006722797 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240) 1639 318.2 1.1e-86
NP_008965 (OMIM: 611327) dnaJ homolog subfamily B  ( 337) 1583 307.8 2.2e-83
NP_001304028 (OMIM: 611327) dnaJ homolog subfamily ( 337) 1583 307.8 2.2e-83
XP_006716814 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348) 1364 266.6 5.6e-71
XP_005251485 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348) 1364 266.6 5.6e-71
NP_036398 (OMIM: 611328) dnaJ homolog subfamily B  ( 348) 1364 266.6 5.6e-71
XP_011516144 (OMIM: 611328) PREDICTED: dnaJ homolo ( 420) 1364 266.7 6.5e-71
NP_001128477 (OMIM: 611328) dnaJ homolog subfamily ( 420) 1364 266.7 6.5e-71
NP_001128476 (OMIM: 611328) dnaJ homolog subfamily ( 462) 1364 266.7   7e-71
NP_001304029 (OMIM: 611327) dnaJ homolog subfamily ( 297) 1209 237.4   3e-62
NP_001304030 (OMIM: 611327) dnaJ homolog subfamily ( 222) 1019 201.5 1.4e-51
NP_001304031 (OMIM: 611327) dnaJ homolog subfamily ( 222) 1019 201.5 1.4e-51
XP_011543306 (OMIM: 610263,617091) PREDICTED: dnaJ ( 350)  685 138.8 1.7e-32
XP_016873165 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258)  679 137.6 2.9e-32
XP_016873167 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258)  679 137.6 2.9e-32
XP_011543311 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258)  679 137.6 2.9e-32
XP_011543309 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258)  679 137.6 2.9e-32
XP_016873166 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258)  679 137.6 2.9e-32
XP_016873164 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258)  679 137.6 2.9e-32
NP_705842 (OMIM: 610263,617091) dnaJ homolog subfa ( 316)  679 137.6 3.4e-32
XP_005274041 (OMIM: 610263,617091) PREDICTED: dnaJ ( 262)  647 131.5 1.9e-30
XP_011543307 (OMIM: 610263,617091) PREDICTED: dnaJ ( 296)  647 131.6 2.1e-30
NP_001530 (OMIM: 602837) dnaJ homolog subfamily A  ( 397)  597 122.3 1.8e-27
XP_011543317 (OMIM: 610263,617091) PREDICTED: dnaJ ( 175)  511 105.8 7.2e-23
NP_005485 (OMIM: 603511,611332) dnaJ homolog subfa ( 241)  420 88.8 1.3e-17
XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ ( 257)  420 88.8 1.4e-17
NP_490647 (OMIM: 603511,611332) dnaJ homolog subfa ( 326)  420 88.9 1.6e-17
XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334)  420 88.9 1.7e-17
XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334)  420 88.9 1.7e-17
XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334)  420 88.9 1.7e-17
XP_016867122 (OMIM: 603511,611332) PREDICTED: dnaJ ( 211)  410 86.9 4.4e-17
NP_001034639 (OMIM: 604139,614881,617017) dnaJ hom ( 277)  395 84.1 3.8e-16
NP_001304032 (OMIM: 611327) dnaJ homolog subfamily (  77)  387 82.2 4.1e-16
NP_006727 (OMIM: 604139,614881,617017) dnaJ homolo ( 324)  395 84.2 4.3e-16
NP_005871 (OMIM: 611322) dnaJ homolog subfamily A  ( 412)  396 84.5 4.5e-16
NP_001128582 (OMIM: 608382) dnaJ homolog subfamily ( 453)  378 81.1   5e-15
NP_005138 (OMIM: 608382) dnaJ homolog subfamily A  ( 480)  378 81.1 5.3e-15
NP_001300968 (OMIM: 602837) dnaJ homolog subfamily ( 240)  367 78.8 1.3e-14
XP_005269989 (OMIM: 608376) PREDICTED: dnaJ homolo ( 409)  354 76.6 1.1e-13
NP_001002762 (OMIM: 608376) dnaJ homolog subfamily ( 409)  354 76.6 1.1e-13
NP_060096 (OMIM: 608376) dnaJ homolog subfamily B  ( 409)  354 76.6 1.1e-13
XP_005269988 (OMIM: 608376) PREDICTED: dnaJ homolo ( 411)  354 76.6 1.1e-13
XP_011543315 (OMIM: 610263,617091) PREDICTED: dnaJ ( 246)  350 75.6 1.2e-13
NP_660157 (OMIM: 611336) dnaJ homolog subfamily B  ( 309)  351 75.9 1.3e-13
NP_699161 (OMIM: 611337) dnaJ homolog subfamily B  ( 232)  349 75.4 1.3e-13


>>NP_006136 (OMIM: 604572) dnaJ homolog subfamily B memb  (340 aa)
 initn: 2322 init1: 2322 opt: 2322  Z-score: 2369.8  bits: 446.9 E(85289): 2.9e-125
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 REIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 REIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 GEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 KKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGE
              250       260       270       280       290       300

              310       320       330       340
pF1KB5 GLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
       ::::::::::::::::::::::::::::::::::::::::
NP_006 GLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
              310       320       330       340

>>XP_006722796 (OMIM: 604572) PREDICTED: dnaJ homolog su  (240 aa)
 initn: 1639 init1: 1639 opt: 1639  Z-score: 1677.1  bits: 318.2 E(85289): 1.1e-86
Smith-Waterman score: 1639; 100.0% identity (100.0% similar) in 240 aa overlap (101-340:1-240)

               80        90       100       110       120       130
pF1KB5 GLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
                                     ::::::::::::::::::::::::::::::
XP_006                               MFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
                                             10        20        30

              140       150       160       170       180       190
pF1KB5 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
               40        50        60        70        80        90

              200       210       220       230       240       250
pF1KB5 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
              100       110       120       130       140       150

              260       270       280       290       300       310
pF1KB5 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
              160       170       180       190       200       210

              320       330       340
pF1KB5 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
       ::::::::::::::::::::::::::::::
XP_006 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
              220       230       240

>>NP_001300893 (OMIM: 604572) dnaJ homolog subfamily B m  (240 aa)
 initn: 1639 init1: 1639 opt: 1639  Z-score: 1677.1  bits: 318.2 E(85289): 1.1e-86
Smith-Waterman score: 1639; 100.0% identity (100.0% similar) in 240 aa overlap (101-340:1-240)

               80        90       100       110       120       130
pF1KB5 GLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
                                     ::::::::::::::::::::::::::::::
NP_001                               MFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
                                             10        20        30

              140       150       160       170       180       190
pF1KB5 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
               40        50        60        70        80        90

              200       210       220       230       240       250
pF1KB5 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
              100       110       120       130       140       150

              260       270       280       290       300       310
pF1KB5 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
              160       170       180       190       200       210

              320       330       340
pF1KB5 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
       ::::::::::::::::::::::::::::::
NP_001 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
              220       230       240

>>NP_001287843 (OMIM: 604572) dnaJ homolog subfamily B m  (240 aa)
 initn: 1639 init1: 1639 opt: 1639  Z-score: 1677.1  bits: 318.2 E(85289): 1.1e-86
Smith-Waterman score: 1639; 100.0% identity (100.0% similar) in 240 aa overlap (101-340:1-240)

               80        90       100       110       120       130
pF1KB5 GLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
                                     ::::::::::::::::::::::::::::::
NP_001                               MFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
                                             10        20        30

              140       150       160       170       180       190
pF1KB5 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
               40        50        60        70        80        90

              200       210       220       230       240       250
pF1KB5 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
              100       110       120       130       140       150

              260       270       280       290       300       310
pF1KB5 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
              160       170       180       190       200       210

              320       330       340
pF1KB5 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
       ::::::::::::::::::::::::::::::
NP_001 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
              220       230       240

>>XP_011526258 (OMIM: 604572) PREDICTED: dnaJ homolog su  (240 aa)
 initn: 1639 init1: 1639 opt: 1639  Z-score: 1677.1  bits: 318.2 E(85289): 1.1e-86
Smith-Waterman score: 1639; 100.0% identity (100.0% similar) in 240 aa overlap (101-340:1-240)

               80        90       100       110       120       130
pF1KB5 GLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
                                     ::::::::::::::::::::::::::::::
XP_011                               MFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
                                             10        20        30

              140       150       160       170       180       190
pF1KB5 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
               40        50        60        70        80        90

              200       210       220       230       240       250
pF1KB5 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
              100       110       120       130       140       150

              260       270       280       290       300       310
pF1KB5 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
              160       170       180       190       200       210

              320       330       340
pF1KB5 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
       ::::::::::::::::::::::::::::::
XP_011 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
              220       230       240

>>XP_006722797 (OMIM: 604572) PREDICTED: dnaJ homolog su  (240 aa)
 initn: 1639 init1: 1639 opt: 1639  Z-score: 1677.1  bits: 318.2 E(85289): 1.1e-86
Smith-Waterman score: 1639; 100.0% identity (100.0% similar) in 240 aa overlap (101-340:1-240)

               80        90       100       110       120       130
pF1KB5 GLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
                                     ::::::::::::::::::::::::::::::
XP_006                               MFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
                                             10        20        30

              140       150       160       170       180       190
pF1KB5 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
               40        50        60        70        80        90

              200       210       220       230       240       250
pF1KB5 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
              100       110       120       130       140       150

              260       270       280       290       300       310
pF1KB5 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
              160       170       180       190       200       210

              320       330       340
pF1KB5 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
       ::::::::::::::::::::::::::::::
XP_006 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
              220       230       240

>>NP_008965 (OMIM: 611327) dnaJ homolog subfamily B memb  (337 aa)
 initn: 1168 init1: 1168 opt: 1583  Z-score: 1618.2  bits: 307.8 E(85289): 2.2e-83
Smith-Waterman score: 1583; 66.3% identity (85.2% similar) in 344 aa overlap (1-339:1-335)

               10        20        30        40        50        60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
       ::::::  ::. .:::::.::.:::.:::..:::::: : :::::::.::::.:::::.:
NP_008 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 REIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN
       :::.:..:::::::.  .::. :  .: .: ::::::::: :: :::: :::. :::.: 
NP_008 REIYDQFGEEGLKGG--AGGTDG--QGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRM
               70          80          90       100       110      

                   130       140       150       160       170     
pF1KB5 G----EEGMDID-DPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEI
       :     : :.:: ::::.: ..:.:.      :.:..  :.: :::::: :.::::::::
NP_008 GGGRDSEEMEIDGDPFSAFGFSMNGYP-----RDRNSVGPSRLKQDPPVIHELRVSLEEI
        120       130       140            150       160       170 

         180       190       200       210       220       230     
pF1KB5 YSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADI
       ::::::.::::.:::: ::.: :.::::::::.:::::::::::::.:::.: :.:::::
NP_008 YSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADI
             180       190       200       210       220       230 

         240       250       260       270       280       290     
pF1KB5 VFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRR
       ::..::: :  ::::::..:: :.::::::::::..::::::::.::.  .:...:::::
NP_008 VFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRR
             240       250       260       270       280       290 

         300       310       320       330       340 
pF1KB5 KVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI 
       .. : :::.::.:..::::.::::: ::. : ..:. ::.. ::  
NP_008 RIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
             300       310       320       330       

>>NP_001304028 (OMIM: 611327) dnaJ homolog subfamily B m  (337 aa)
 initn: 1168 init1: 1168 opt: 1583  Z-score: 1618.2  bits: 307.8 E(85289): 2.2e-83
Smith-Waterman score: 1583; 66.3% identity (85.2% similar) in 344 aa overlap (1-339:1-335)

               10        20        30        40        50        60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
       ::::::  ::. .:::::.::.:::.:::..:::::: : :::::::.::::.:::::.:
NP_001 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 REIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN
       :::.:..:::::::.  .::. :  .: .: ::::::::: :: :::: :::. :::.: 
NP_001 REIYDQFGEEGLKGG--AGGTDG--QGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRM
               70          80          90       100       110      

                   130       140       150       160       170     
pF1KB5 G----EEGMDID-DPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEI
       :     : :.:: ::::.: ..:.:.      :.:..  :.: :::::: :.::::::::
NP_001 GGGRDSEEMEIDGDPFSAFGFSMNGYP-----RDRNSVGPSRLKQDPPVIHELRVSLEEI
        120       130       140            150       160       170 

         180       190       200       210       220       230     
pF1KB5 YSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADI
       ::::::.::::.:::: ::.: :.::::::::.:::::::::::::.:::.: :.:::::
NP_001 YSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADI
             180       190       200       210       220       230 

         240       250       260       270       280       290     
pF1KB5 VFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRR
       ::..::: :  ::::::..:: :.::::::::::..::::::::.::.  .:...:::::
NP_001 VFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRR
             240       250       260       270       280       290 

         300       310       320       330       340 
pF1KB5 KVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI 
       .. : :::.::.:..::::.::::: ::. : ..:. ::.. ::  
NP_001 RIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
             300       310       320       330       

>>XP_006716814 (OMIM: 611328) PREDICTED: dnaJ homolog su  (348 aa)
 initn: 1307 init1: 901 opt: 1364  Z-score: 1395.2  bits: 266.6 E(85289): 5.6e-71
Smith-Waterman score: 1496; 62.6% identity (81.3% similar) in 353 aa overlap (1-339:1-346)

               10        20        30        40        50        60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
       ::::::. ::.  ::...:::.:::..::.:::::::::.::::::::::::::::::.:
XP_006 MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKK
               10        20        30        40        50        60

               70         80        90       100       110         
pF1KB5 REIFDRYGEEGLK-GSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQR
       : ..:.::::::: :.: ::::.:     :: ::::::::: :: :::: :::: ::.. 
XP_006 RGLYDQYGEEGLKTGGGTSGGSSG-----SFHYTFHGDPHATFASFFGGSNPFDIFFASS
               70        80             90       100       110     

     120                  130       140       150         160      
pF1KB5 NGE--------EGMDID---DPFSGFPMGMGGFTNVNFGRSRSAQE--PARKKQDPPVTH
        .         . ::.:   :::..:  :  ::.... :  :. .   : :: :::::.:
XP_006 RSTRPFSGFDPDDMDVDEDEDPFGAF--GRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVH
         120       130       140         150       160       170   

        170       180       190       200       210       220      
pF1KB5 DLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQ
       .::::::::: : ::.:::...::::::...:.::::: : .:.::::::::::::::: 
XP_006 ELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDA
           180       190       200       210       220       230   

        230       240       250       260       270       280      
pF1KB5 TSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK
       : .:::::::::::::::  :.:::..:.: : :::.:::::::::.::.:::.::.  .
XP_006 TPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCN
           240       250       260       270       280       290   

        290       300       310       320       330       340 
pF1KB5 DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI 
       :::.::  ... :::::.::.: .:::::.::.: ::.:.   .: .:.: ::  
XP_006 DVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLPCS
           300       310       320       330       340        

>>XP_005251485 (OMIM: 611328) PREDICTED: dnaJ homolog su  (348 aa)
 initn: 1307 init1: 901 opt: 1364  Z-score: 1395.2  bits: 266.6 E(85289): 5.6e-71
Smith-Waterman score: 1496; 62.6% identity (81.3% similar) in 353 aa overlap (1-339:1-346)

               10        20        30        40        50        60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
       ::::::. ::.  ::...:::.:::..::.:::::::::.::::::::::::::::::.:
XP_005 MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKK
               10        20        30        40        50        60

               70         80        90       100       110         
pF1KB5 REIFDRYGEEGLK-GSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQR
       : ..:.::::::: :.: ::::.:     :: ::::::::: :: :::: :::: ::.. 
XP_005 RGLYDQYGEEGLKTGGGTSGGSSG-----SFHYTFHGDPHATFASFFGGSNPFDIFFASS
               70        80             90       100       110     

     120                  130       140       150         160      
pF1KB5 NGE--------EGMDID---DPFSGFPMGMGGFTNVNFGRSRSAQE--PARKKQDPPVTH
        .         . ::.:   :::..:  :  ::.... :  :. .   : :: :::::.:
XP_005 RSTRPFSGFDPDDMDVDEDEDPFGAF--GRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVH
         120       130       140         150       160       170   

        170       180       190       200       210       220      
pF1KB5 DLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQ
       .::::::::: : ::.:::...::::::...:.::::: : .:.::::::::::::::: 
XP_005 ELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDA
           180       190       200       210       220       230   

        230       240       250       260       270       280      
pF1KB5 TSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK
       : .:::::::::::::::  :.:::..:.: : :::.:::::::::.::.:::.::.  .
XP_005 TPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCN
           240       250       260       270       280       290   

        290       300       310       320       330       340 
pF1KB5 DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI 
       :::.::  ... :::::.::.: .:::::.::.: ::.:.   .: .:.: ::  
XP_005 DVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLPCS
           300       310       320       330       340        




340 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 03:41:46 2016 done: Fri Nov  4 03:41:47 2016
 Total Scan time:  8.350 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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