Result of FASTA (ccds) for pF1KB5221
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5221, 332 aa
  1>>>pF1KB5221 332 - 332 aa - 332 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8119+/-0.00106; mu= 12.8084+/- 0.064
 mean_var=67.5852+/-14.120, 0's: 0 Z-trim(102.8): 30  B-trim: 0 in 0/48
 Lambda= 0.156009
 statistics sampled from 7074 (7095) to 7074 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.587), E-opt: 0.2 (0.218), width:  16
 Scan time:  2.210

The best scores are:                                      opt bits E(32554)
CCDS7839.1 LDHA gene_id:3939|Hs108|chr11           ( 332) 2167 497.0 8.5e-141
CCDS53609.1 LDHA gene_id:3939|Hs108|chr11          ( 361) 2167 497.0 9.2e-141
CCDS7840.1 LDHC gene_id:3948|Hs108|chr11           ( 332) 1745 402.1 3.3e-112
CCDS8691.1 LDHB gene_id:3945|Hs108|chr12           ( 334) 1720 396.4 1.7e-110
CCDS7841.1 LDHAL6A gene_id:160287|Hs108|chr11      ( 332) 1679 387.2 9.9e-108
CCDS10171.1 LDHAL6B gene_id:92483|Hs108|chr15      ( 381) 1653 381.4 6.5e-106
CCDS53611.1 LDHA gene_id:3939|Hs108|chr11          ( 241) 1561 360.6 7.3e-100
CCDS53610.1 LDHA gene_id:3939|Hs108|chr11          ( 274) 1514 350.0 1.3e-96
CCDS44549.1 LDHA gene_id:3939|Hs108|chr11          ( 274) 1306 303.2 1.6e-82
CCDS58124.1 UEVLD gene_id:55293|Hs108|chr11        ( 449)  500 121.9 9.9e-28
CCDS41624.1 UEVLD gene_id:55293|Hs108|chr11        ( 471)  500 121.9   1e-27
CCDS58122.1 UEVLD gene_id:55293|Hs108|chr11        ( 341)  497 121.2 1.2e-27
CCDS58123.1 UEVLD gene_id:55293|Hs108|chr11        ( 357)  497 121.2 1.3e-27
CCDS7843.1 UEVLD gene_id:55293|Hs108|chr11         ( 379)  497 121.2 1.4e-27


>>CCDS7839.1 LDHA gene_id:3939|Hs108|chr11                (332 aa)
 initn: 2167 init1: 2167 opt: 2167  Z-score: 2641.2  bits: 497.0 E(32554): 8.5e-141
Smith-Waterman score: 2167; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:1-332)

               10        20        30        40        50        60
pF1KB5 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
              250       260       270       280       290       300

              310       320       330  
pF1KB5 SDLVKVTLTSEEEARLKKSADTLWGIQKELQF
       ::::::::::::::::::::::::::::::::
CCDS78 SDLVKVTLTSEEEARLKKSADTLWGIQKELQF
              310       320       330  

>>CCDS53609.1 LDHA gene_id:3939|Hs108|chr11               (361 aa)
 initn: 2167 init1: 2167 opt: 2167  Z-score: 2640.6  bits: 497.0 E(32554): 9.2e-141
Smith-Waterman score: 2167; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:30-361)

                                            10        20        30 
pF1KB5                              MATLKDQLIYNLLKEEQTPQNKITVVGVGAV
                                    :::::::::::::::::::::::::::::::
CCDS53 MGEPSGGYTYTQTSIFLFHAKIPFGSKSNMATLKDQLIYNLLKEEQTPQNKITVVGVGAV
               10        20        30        40        50        60

              40        50        60        70        80        90 
pF1KB5 GMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKL
               70        80        90       100       110       120

             100       110       120       130       140       150 
pF1KB5 VIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKIS
              130       140       150       160       170       180

             160       170       180       190       200       210 
pF1KB5 GFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSL
              190       200       210       220       230       240

             220       230       240       250       260       270 
pF1KB5 KTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVH
              250       260       270       280       290       300

             280       290       300       310       320       330 
pF1KB5 PVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEARLKKSADTLWGIQKELQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEARLKKSADTLWGIQKELQ
              310       320       330       340       350       360

        
pF1KB5 F
       :
CCDS53 F
        

>>CCDS7840.1 LDHC gene_id:3948|Hs108|chr11                (332 aa)
 initn: 1743 init1: 1723 opt: 1745  Z-score: 2127.9  bits: 402.1 E(32554): 3.3e-112
Smith-Waterman score: 1745; 75.3% identity (94.3% similar) in 332 aa overlap (1-332:1-332)

               10        20        30        40        50        60
pF1KB5 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
       :.:.:.::: .:...... : :::.::.::::::::::::.::::::::::::  :::::
CCDS78 MSTVKEQLIEKLIEDDENSQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLKG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
       :::::::::::. : ::.:::::.:.:::..::.::::::::::.:: :::::: :.: :
CCDS78 EMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKSI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
       :: .:.:::.::.:.::::::::::..:::::.: .:::::::::::::::::.::.:::
CCDS78 IPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
       :: :::::..:::::::::.:::.:::::.:::: : ::::.:::.::..::::..::::
CCDS78 HPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
       .::::::::::::::: ::. ::.::::::::::::.:::::::...:::.::.::.::.
CCDS78 IIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGV
              250       260       270       280       290       300

              310       320       330  
pF1KB5 SDLVKVTLTSEEEARLKKSADTLWGIQKELQF
       ::.::..:.::::: .::::.:::.:::.: :
CCDS78 SDVVKINLNSEEEALFKKSAETLWNIQKDLIF
              310       320       330  

>>CCDS8691.1 LDHB gene_id:3945|Hs108|chr12                (334 aa)
 initn: 1712 init1: 1668 opt: 1720  Z-score: 2097.4  bits: 396.4 E(32554): 1.7e-110
Smith-Waterman score: 1720; 75.6% identity (93.7% similar) in 332 aa overlap (1-331:1-332)

               10         20        30        40        50         
pF1KB5 MATLKDQLIYNLLKEEQT-PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLK
       :::::..::  . .:: : :.::::::::: :::::::::: :.::::::::::.:::::
CCDS86 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB5 GEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKF
       :::::::::::::.:::::. :::.::::::.:..:::.:::::::::::::::::.:::
CCDS86 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB5 IIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG
       :::..:::::.: ...:::::::::::.::.::.::.::::::::::::::::::.:.::
CCDS86 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB5 VHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAY
       .:: :::::.::::::::: ::::.:::::::. :.:..:::.:.:.::::::.::::::
CCDS86 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB5 EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNG
       :::::::::.:::::::::: ::..::: :.::::::.::.:::...::::.::::.  :
CCDS86 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
              250       260       270       280       290       300

     300       310       320       330   
pF1KB5 ISDLVKVTLTSEEEARLKKSADTLWGIQKELQF 
       ......  : ..: :.::::::::: :::.:.  
CCDS86 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
              310       320       330    

>>CCDS7841.1 LDHAL6A gene_id:160287|Hs108|chr11           (332 aa)
 initn: 1679 init1: 1679 opt: 1679  Z-score: 2047.6  bits: 387.2 E(32554): 9.9e-108
Smith-Waterman score: 1679; 73.5% identity (92.8% similar) in 332 aa overlap (1-332:1-332)

               10        20        30        40        50        60
pF1KB5 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
       :::.:..:: :. .::   .:::..::.:.::.:::::::.: :.:::.:::: : ::::
CCDS78 MATIKSELIKNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
       : ::::::: :.. :.:::.::: :::::.::::::::::..::.::.::::::.:::..
CCDS78 ETMDLQHGSPFMKMPNIVSSKDYLVTANSNLVIITAGARQKKGETRLDLVQRNVSIFKLM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
       :::...:::.::::::.::::::::::::.::::::::::::::::::::::..:.:::.
CCDS78 IPNITQYSPHCKLLIVTNPVDILTYVAWKLSGFPKNRVIGSGCNLDSARFRYFIGQRLGI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
       :  :::: .::::::::::::::.:.::: :: :.::.::::: :::..:::.:. :.::
CCDS78 HSESCHGLILGEHGDSSVPVWSGVNIAGVPLKDLNPDIGTDKDPEQWENVHKKVISSGYE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
       ..:.::::::.:.::::::.:::.:::::::::::. ::::::..:.:::::::::.:::
CCDS78 MVKMKGYTSWGISLSVADLTESILKNLRRVHPVSTLSKGLYGINEDIFLSVPCILGENGI
              250       260       270       280       290       300

              310       320       330  
pF1KB5 SDLVKVTLTSEEEARLKKSADTLWGIQKELQF
       .::.:: :: :::: :.:::.::: :::::..
CCDS78 TDLIKVKLTLEEEACLQKSAETLWEIQKELKL
              310       320       330  

>>CCDS10171.1 LDHAL6B gene_id:92483|Hs108|chr15           (381 aa)
 initn: 1653 init1: 1653 opt: 1653  Z-score: 2015.0  bits: 381.4 E(32554): 6.5e-106
Smith-Waterman score: 1653; 71.1% identity (91.9% similar) in 332 aa overlap (1-332:50-381)

                                             10        20        30
pF1KB5                               MATLKDQLIYNLLKEEQTPQNKITVVGVGA
                                     :::.:..::  . .:. . ..:....:.:.
CCDS10 NFLCLGMALCPRQATRIPLNGTWLFTPVSKMATVKSELIERFTSEKPVHHSKVSIIGTGS
      20        30        40        50        60        70         

               40        50        60        70        80        90
pF1KB5 VGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSK
       ::::::::::.: :.:::::::. ::::::: ::::::: : . :.:: .::: :::::.
CCDS10 VGMACAISILLKGLSDELALVDLDEDKLKGETMDLQHGSPFTKMPNIVCSKDYFVTANSN
      80        90       100       110       120       130         

              100       110       120       130       140       150
pF1KB5 LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKI
       ::::::::::..::.::::::::: :::..: ..:.:::.:::.:::::::::::::::.
CCDS10 LVIITAGARQEKGETRLNLVQRNVAIFKLMISSIVQYSPHCKLIIVSNPVDILTYVAWKL
     140       150       160       170       180       190         

              160       170       180       190       200       210
pF1KB5 SGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVS
       :.:::::.::::::::.::::.:.:..::.:  :::::.::::::::::::::.:.::: 
CCDS10 SAFPKNRIIGSGCNLDTARFRFLIGQKLGIHSESCHGWILGEHGDSSVPVWSGVNIAGVP
     200       210       220       230       240       250         

              220       230       240       250       260       270
pF1KB5 LKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRV
       :: :. :.::::: ::::.:::.:. .:::.::.:::::::::::::::.:::.:::::.
CCDS10 LKDLNSDIGTDKDPEQWKNVHKEVTATAYEIIKMKGYTSWAIGLSVADLTESILKNLRRI
     260       270       280       290       300       310         

              280       290       300       310       320       330
pF1KB5 HPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEARLKKSADTLWGIQKEL
       :::::.::::::: ..::::.:::::.:::..:.:. :: ::::.::::: ::: ::..:
CCDS10 HPVSTIIKGLYGIDEEVFLSIPCILGENGITNLIKIKLTPEEEAHLKKSAKTLWEIQNKL
     320       330       340       350       360       370         

         
pF1KB5 QF
       ..
CCDS10 KL
     380 

>>CCDS53611.1 LDHA gene_id:3939|Hs108|chr11               (241 aa)
 initn: 1561 init1: 1561 opt: 1561  Z-score: 1906.3  bits: 360.6 E(32554): 7.3e-100
Smith-Waterman score: 1561; 98.7% identity (99.6% similar) in 239 aa overlap (1-239:1-239)

               10        20        30        40        50        60
pF1KB5 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::: .. 
CCDS53 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVERVFT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
                                                                   
CCDS53 E                                                           
                                                                   

>>CCDS53610.1 LDHA gene_id:3939|Hs108|chr11               (274 aa)
 initn: 1514 init1: 1514 opt: 1514  Z-score: 1848.2  bits: 350.0 E(32554): 1.3e-96
Smith-Waterman score: 1514; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)

               10        20        30        40        50        60
pF1KB5 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
       :::::::::::::::::::::::::::::::::::::::::::::::::           
CCDS53 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKECRYTLGDPKGA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
                                                                   
CCDS53 AILKSSDVISFHCLGYNRILGGGCACCPFYLICD                          
              250       260       270                              

>>CCDS44549.1 LDHA gene_id:3939|Hs108|chr11               (274 aa)
 initn: 1306 init1: 1306 opt: 1306  Z-score: 1595.2  bits: 303.2 E(32554): 1.6e-82
Smith-Waterman score: 1673; 82.5% identity (82.5% similar) in 332 aa overlap (1-332:1-274)

               10        20        30        40        50        60
pF1KB5 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
       :::::::::::::::::::::                                       
CCDS44 EMMDLQHGSLFLRTPKIVSGK---------------------------------------
               70        80                                        

              130       140       150       160       170       180
pF1KB5 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
                          :::::::::::::::::::::::::::::::::::::::::
CCDS44 -------------------VDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
                                 90       100       110       120  

              190       200       210       220       230       240
pF1KB5 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
            130       140       150       160       170       180  

              250       260       270       280       290       300
pF1KB5 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
            190       200       210       220       230       240  

              310       320       330  
pF1KB5 SDLVKVTLTSEEEARLKKSADTLWGIQKELQF
       ::::::::::::::::::::::::::::::::
CCDS44 SDLVKVTLTSEEEARLKKSADTLWGIQKELQF
            250       260       270    

>>CCDS58124.1 UEVLD gene_id:55293|Hs108|chr11             (449 aa)
 initn: 748 init1: 334 opt: 500  Z-score: 611.3  bits: 121.9 E(32554): 9.9e-28
Smith-Waterman score: 758; 40.3% identity (73.3% similar) in 318 aa overlap (16-332:156-449)

                              10        20        30        40     
pF1KB5                MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLA
                                     :.   ::::::: : .:.::...:  : .:
CCDS58 DEARQVDLLAYIAKITEGVSDTNSKSWANHENKTVNKITVVGGGELGIACTLAISAKGIA
         130       140       150       160       170       180     

          50        60        70        80        90       100     
pF1KB5 DELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGES
       :.:.:.:. :   ::  :::.    ..  :..  .:: ...:.::.::.:...    ..:
CCDS58 DRLVLLDLSEGT-KGATMDLE----IFNLPNVEISKDLSASAHSKVVIFTVNS-LGSSQS
         190        200           210       220       230          

         110       120       130       140       150       160     
pF1KB5 RLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNL
        :..:: ::..:. ..: . .:: .  ::..:.::.:.:::.::.: :: ::::: ::::
CCDS58 YLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNL
     240       250       260       270       280       290         

         170       180       190       200       210       220     
pF1KB5 DSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKE
       :: :..:.. . : ..  . . ::.::.:...: .:::.. . ::    : .        
CCDS58 DSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQEEV-VS----HTS--------
     300       310       320       330       340                   

         230       240       250       260       270       280     
pF1KB5 QWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKD
            . :. . :.:....::  ::..::::::...::..: ..:: ::.. :: : :..
CCDS58 -----QVQLSNRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYDINS
             350       360       370       380       390       400 

         290       300       310        320       330  
pF1KB5 DVFLSVPCILGQNGISDLVKVTLTSEE-EARLKKSADTLWGIQKELQF
       .::::.::::: ::.:...:.::  .    .:..::... ..:..:..
CCDS58 EVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQLKL
             410       420       430       440         




332 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 03:28:25 2016 done: Fri Nov  4 03:28:25 2016
 Total Scan time:  2.210 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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