Result of FASTA (ccds) for pF1KB4862
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4862, 485 aa
  1>>>pF1KB4862 485 - 485 aa - 485 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7177+/-0.000841; mu= 16.2605+/- 0.051
 mean_var=79.4634+/-15.851, 0's: 0 Z-trim(107.8): 72  B-trim: 10 in 1/51
 Lambda= 0.143877
 statistics sampled from 9698 (9775) to 9698 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.675), E-opt: 0.2 (0.3), width:  16
 Scan time:  2.570

The best scores are:                                      opt bits E(32554)
CCDS44767.1 ETS1 gene_id:2113|Hs108|chr11          ( 485) 3384 712.1 3.3e-205
CCDS8475.1 ETS1 gene_id:2113|Hs108|chr11           ( 441) 2861 603.5 1.5e-172
CCDS13659.1 ETS2 gene_id:2114|Hs108|chr21          ( 469) 1513 323.7 2.6e-88
CCDS81648.1 ETS1 gene_id:2113|Hs108|chr11          ( 354) 1499 320.8 1.5e-87
CCDS53724.1 ETS1 gene_id:2113|Hs108|chr11          ( 225) 1373 294.5 7.9e-80
CCDS59230.1 FLI1 gene_id:2313|Hs108|chr11          ( 259)  465 106.1 4.8e-23
CCDS13575.1 GABPA gene_id:2551|Hs108|chr21         ( 454)  468 106.8   5e-23
CCDS59231.1 FLI1 gene_id:2313|Hs108|chr11          ( 386)  465 106.2 6.7e-23
CCDS53725.1 FLI1 gene_id:2313|Hs108|chr11          ( 419)  465 106.2 7.2e-23
CCDS44768.1 FLI1 gene_id:2313|Hs108|chr11          ( 452)  465 106.2 7.7e-23
CCDS58789.1 ERG gene_id:2078|Hs108|chr21           ( 363)  445 102.0 1.1e-21
CCDS46649.1 ERG gene_id:2078|Hs108|chr21           ( 387)  445 102.0 1.2e-21
CCDS82674.1 ERG gene_id:2078|Hs108|chr21           ( 455)  445 102.0 1.4e-21
CCDS13657.1 ERG gene_id:2078|Hs108|chr21           ( 462)  445 102.1 1.4e-21
CCDS13658.1 ERG gene_id:2078|Hs108|chr21           ( 479)  445 102.1 1.4e-21
CCDS46648.1 ERG gene_id:2078|Hs108|chr21           ( 486)  445 102.1 1.4e-21
CCDS2428.1 FEV gene_id:54738|Hs108|chr2            ( 238)  438 100.4 2.2e-21
CCDS55084.1 ETV1 gene_id:2115|Hs108|chr7           ( 374)  430 98.9   1e-20
CCDS55083.1 ETV1 gene_id:2115|Hs108|chr7           ( 419)  430 98.9 1.1e-20
CCDS55085.1 ETV1 gene_id:2115|Hs108|chr7           ( 437)  430 98.9 1.1e-20
CCDS55087.1 ETV1 gene_id:2115|Hs108|chr7           ( 454)  430 98.9 1.2e-20
CCDS55086.1 ETV1 gene_id:2115|Hs108|chr7           ( 459)  430 98.9 1.2e-20
CCDS55088.1 ETV1 gene_id:2115|Hs108|chr7           ( 477)  430 98.9 1.2e-20
CCDS33906.1 ETV5 gene_id:2119|Hs108|chr3           ( 510)  421 97.1 4.7e-20
CCDS59292.1 ETV4 gene_id:2118|Hs108|chr17          ( 207)  409 94.4 1.3e-19
CCDS58553.1 ETV4 gene_id:2118|Hs108|chr17          ( 445)  409 94.6 2.4e-19
CCDS11465.1 ETV4 gene_id:2118|Hs108|chr17          ( 484)  409 94.6 2.6e-19
CCDS77281.1 ETV2 gene_id:2116|Hs108|chr19          ( 155)  396 91.6 6.5e-19
CCDS74341.1 ETV2 gene_id:2116|Hs108|chr19          ( 249)  394 91.3 1.3e-18
CCDS32995.2 ETV2 gene_id:2116|Hs108|chr19          ( 342)  394 91.4 1.7e-18
CCDS12600.1 ERF gene_id:2077|Hs108|chr19           ( 548)  377 88.0 2.8e-17
CCDS59165.1 ELK1 gene_id:2002|Hs108|chrX           (  95)  353 82.6 2.1e-16
CCDS1164.1 ETV3 gene_id:2117|Hs108|chr1            ( 143)  355 83.1 2.2e-16
CCDS30893.1 ETV3L gene_id:440695|Hs108|chr1        ( 361)  356 83.5 4.1e-16
CCDS44250.1 ETV3 gene_id:2117|Hs108|chr1           ( 512)  355 83.4 6.3e-16
CCDS14283.1 ELK1 gene_id:2002|Hs108|chrX           ( 428)  353 82.9 7.3e-16
CCDS9060.1 ELK3 gene_id:2004|Hs108|chr12           ( 407)  340 80.2 4.5e-15
CCDS1457.1 ELK4 gene_id:2005|Hs108|chr1            ( 405)  328 77.7 2.5e-14
CCDS1456.1 ELK4 gene_id:2005|Hs108|chr1            ( 431)  328 77.8 2.7e-14
CCDS45043.1 ELF1 gene_id:1997|Hs108|chr13          ( 595)  304 72.9 1.1e-12
CCDS9374.1 ELF1 gene_id:1997|Hs108|chr13           ( 619)  300 72.0   2e-12
CCDS64062.1 ELF2 gene_id:1998|Hs108|chr4           ( 521)  294 70.7 4.2e-12
CCDS3745.1 ELF2 gene_id:1998|Hs108|chr4            ( 533)  294 70.7 4.2e-12
CCDS3744.1 ELF2 gene_id:1998|Hs108|chr4            ( 581)  294 70.8 4.6e-12
CCDS82954.1 ELF2 gene_id:1998|Hs108|chr4           ( 593)  294 70.8 4.6e-12
CCDS14617.1 ELF4 gene_id:2000|Hs108|chrX           ( 663)  294 70.8 5.1e-12
CCDS64063.1 ELF2 gene_id:1998|Hs108|chr4           ( 504)  283 68.4   2e-11


>>CCDS44767.1 ETS1 gene_id:2113|Hs108|chr11               (485 aa)
 initn: 3384 init1: 3384 opt: 3384  Z-score: 3797.7  bits: 712.1 E(32554): 3.3e-205
Smith-Waterman score: 3384; 100.0% identity (100.0% similar) in 485 aa overlap (1-485:1-485)

               10        20        30        40        50        60
pF1KB4 MSYFVDSAGSSPVPYSAPRPAVVRQGPSNTYEDPRMNCGFQSNYHQQRPCYPFWDEMATQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MSYFVDSAGSSPVPYSAPRPAVVRQGPSNTYEDPRMNCGFQSNYHQQRPCYPFWDEMATQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 EVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPRQWTETH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPRQWTETH
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 VRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKED
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 VKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEEL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 LSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQDSFESIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQDSFESIE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 SYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 DKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 KRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVK
              430       440       450       460       470       480

            
pF1KB4 PDADE
       :::::
CCDS44 PDADE
            

>>CCDS8475.1 ETS1 gene_id:2113|Hs108|chr11                (441 aa)
 initn: 2861 init1: 2861 opt: 2861  Z-score: 3211.6  bits: 603.5 E(32554): 1.5e-172
Smith-Waterman score: 2861; 100.0% identity (100.0% similar) in 414 aa overlap (72-485:28-441)

              50        60        70        80        90       100 
pF1KB4 SNYHQQRPCYPFWDEMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFT
                                     ::::::::::::::::::::::::::::::
CCDS84    MKAAVDLKPTLTIIKTEKVDLELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFT
                  10        20        30        40        50       

             110       120       130       140       150       160 
pF1KB4 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA
        60        70        80        90       100       110       

             170       180       190       200       210       220 
pF1KB4 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE
       120       130       140       150       160       170       

             230       240       250       260       270       280 
pF1KB4 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC
       180       190       200       210       220       230       

             290       300       310       320       330       340 
pF1KB4 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN
       240       250       260       270       280       290       

             350       360       370       380       390       400 
pF1KB4 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT
       300       310       320       330       340       350       

             410       420       430       440       450       460 
pF1KB4 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD
       360       370       380       390       400       410       

             470       480     
pF1KB4 LQSLLGYTPEELHAMLDVKPDADE
       ::::::::::::::::::::::::
CCDS84 LQSLLGYTPEELHAMLDVKPDADE
       420       430       440 

>>CCDS13659.1 ETS2 gene_id:2114|Hs108|chr21               (469 aa)
 initn: 1464 init1: 877 opt: 1513  Z-score: 1699.0  bits: 323.7 E(32554): 2.6e-88
Smith-Waterman score: 1519; 54.7% identity (76.5% similar) in 439 aa overlap (55-485:45-469)

           30        40        50        60        70        80    
pF1KB4 QGPSNTYEDPRMNCGFQSNYHQQRPCYPFWDEMATQEVPTGLEHCVSDMECADVPLLTPS
                                     .:.. :::::::.    :    ..::::: 
CCDS13 VANSYRGTLKRQPAFDTFDGSLFAVFPSLNEEQTLQEVPTGLDSISHDSANCELPLLTPC
           20        30        40        50        60        70    

           90       100       110       120       130       140    
pF1KB4 SKEMMSQALKATFSGFTKEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCM
       :: .:::::::::::: :::.::::::.:  :.: .: .:..::.::::: .:..:.: :
CCDS13 SKAVMSQALKATFSGFKKEQRRLGIPKNPWLWSEQQVCQWLLWATNEFSLVNVNLQRFGM
           80        90       100       110       120       130    

          150       160       170       180           190       200
pF1KB4 NGAALCALGKDCFLELAPDFVGDILWEHLEILQKEDVKP----YQVNGVNPAYPESRYTS
       ::  :: :::. :::::::::::::::::: . ::. .     :. :.   . :.  . .
CCDS13 NGQMLCNLGKERFLELAPDFVGDILWEHLEQMIKENQEKTEDQYEENSHLTSVPH--WIN
          140       150       160       170       180         190  

              210       220        230       240        250        
pF1KB4 DYFISYGIEHAQCVPPSEFSEPSFITESY-QTLHPISSEELLSLKYEND-YPSVILRDPL
       .  ...: :.:    :  ..  ..   .  ... : :.  .:: . : . .:.  :    
CCDS13 SNTLGFGTEQA----PYGMQTQNYPKGGLLDSMCPASTPSVLSSEQEFQMFPKSRL----
            200           210       220       230       240        

      260       270       280       290        300       310       
pF1KB4 QTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQDSFES-IESYDSCDRLTQSWSSQSS
         ....  : ...:.    .:. .  .. :    .:: :.  .:..: : : :::.::::
CCDS13 --SSVSVTYCSVSQDF-PGSNLNLLTNNSGTPKDHDSPENGADSFESSDSLLQSWNSQSS
            250        260       270       280       290       300 

       320       330       340       350        360       370      
pF1KB4 FNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRAD-LNKDKPVIPAAALAGYTGS
       . ..:::::..::. .:   .:  .::  .::::...:.: ... :::::::.:::.:::
CCDS13 LLDVQRVPSFESFE-DDCSQSLCLNKPTMSFKDYIQERSDPVEQGKPVIPAAVLAGFTGS
             310        320       330       340       350       360

        380       390       400       410       420       430      
pF1KB4 GPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRG
       :::::::::::::.:::::::::::::::::::.::::::::::::::::::::::::::
CCDS13 GPIQLWQFLLELLSDKSCQSFISWTGDGWEFKLADPDEVARRWGKRKNKPKMNYEKLSRG
              370       380       390       400       410       420

        440       450       460       470       480     
pF1KB4 LRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
       :::::::::::::.:::::::::::::.:::.:::::::.: :.::...
CCDS13 LRYYYDKNIIHKTSGKRYVYRFVCDLQNLLGFTPEELHAILGVQPDTED
              430       440       450       460         

>>CCDS81648.1 ETS1 gene_id:2113|Hs108|chr11               (354 aa)
 initn: 1498 init1: 1498 opt: 1499  Z-score: 1685.1  bits: 320.8 E(32554): 1.5e-87
Smith-Waterman score: 2086; 79.0% identity (79.0% similar) in 414 aa overlap (72-485:28-354)

              50        60        70        80        90       100 
pF1KB4 SNYHQQRPCYPFWDEMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFT
                                     ::::::::::::::::::::::::::::::
CCDS81    MKAAVDLKPTLTIIKTEKVDLELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFT
                  10        20        30        40        50       

             110       120       130       140       150       160 
pF1KB4 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA
        60        70        80        90       100       110       

             170       180       190       200       210       220 
pF1KB4 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE
       120       130       140       150       160       170       

             230       240       250       260       270       280 
pF1KB4 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC
       180       190       200       210       220       230       

             290       300       310       320       330       340 
pF1KB4 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN
       :::::::                                                     
CCDS81 MGRTSRG-----------------------------------------------------
       240                                                         

             350       360       370       380       390       400 
pF1KB4 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT
                                         ::::::::::::::::::::::::::
CCDS81 ----------------------------------SGPIQLWQFLLELLTDKSCQSFISWT
                                            250       260       270

             410       420       430       440       450       460 
pF1KB4 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD
              280       290       300       310       320       330

             470       480     
pF1KB4 LQSLLGYTPEELHAMLDVKPDADE
       ::::::::::::::::::::::::
CCDS81 LQSLLGYTPEELHAMLDVKPDADE
              340       350    

>>CCDS53724.1 ETS1 gene_id:2113|Hs108|chr11               (225 aa)
 initn: 1373 init1: 1373 opt: 1373  Z-score: 1546.6  bits: 294.5 E(32554): 7.9e-80
Smith-Waterman score: 1373; 99.5% identity (99.5% similar) in 200 aa overlap (286-485:26-225)

         260       270       280       290       300       310     
pF1KB4 DPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQ
                                     : ::::::::::::::::::::::::::::
CCDS53      MKAAVDLKPTLTIIKTEKVDLELFPSPGKLGGQDSFESIESYDSCDRLTQSWSSQ
                    10        20        30        40        50     

         320       330       340       350       360       370     
pF1KB4 SSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTG
          60        70        80        90       100       110     

         380       390       400       410       420       430     
pF1KB4 SGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSR
         120       130       140       150       160       170     

         440       450       460       470       480     
pF1KB4 GLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
       ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
         180       190       200       210       220     

>>CCDS59230.1 FLI1 gene_id:2313|Hs108|chr11               (259 aa)
 initn: 469 init1: 425 opt: 465  Z-score: 527.1  bits: 106.1 E(32554): 4.8e-23
Smith-Waterman score: 465; 47.8% identity (72.0% similar) in 157 aa overlap (309-458:11-167)

      280       290       300       310       320       330        
pF1KB4 NMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFD----SED
                                     : : ..:::  :... :::::      ...
CCDS59                     MDPGSLLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNN
                                   10        20        30        40

          340       350       360          370       380       390 
pF1KB4 YPAALPNHKPKGTFKDYVRDRADLNKDKP---VIPAAALAGYTGSGPIQLWQFLLELLTD
       . ..: .  : :  .   ..  .  .  :   . :...  .  ::: :::::::::::.:
CCDS59 MNSGLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSD
               50        60        70        80        90       100

             400       410       420       430       440       450 
pF1KB4 KSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAG
       ..  : :.: : . :::..::::::::::.::.::.:::.::::.:::::::::. :. :
CCDS59 SANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHG
              110       120       130       140       150       160

             460       470       480                               
pF1KB4 KRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE                          
       :::.:.:                                                     
CCDS59 KRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSS
              170       180       190       200       210       220

>>CCDS13575.1 GABPA gene_id:2551|Hs108|chr21              (454 aa)
 initn: 715 init1: 459 opt: 468  Z-score: 526.9  bits: 106.8 E(32554): 5e-23
Smith-Waterman score: 522; 31.5% identity (51.5% similar) in 400 aa overlap (81-477:152-418)

               60        70        80        90         100        
pF1KB4 YPFWDEMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALK--ATFSGFTKEQQRLG
                                     .:  : :   :. .  :.. :. :::.:::
CCDS13 VVIDPDAHHAESEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLG
             130       140       150       160       170       180 

      110       120       130       140       150       160        
pF1KB4 IPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDI
       :: :: ::.  .:  ::.:...:::.  .:.  . ..:  ::.:... :.. .:   :.:
CCDS13 IPYDPIQWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPR--GEI
             190       200       210       220       230           

      170       180       190       200       210       220        
pF1KB4 LWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITES
       :: :::.:.:                       : ..                       
CCDS13 LWSHLELLRK-----------------------YVLA-----------------------
     240                              250                          

      230       240       250       260       270       280        
pF1KB4 YQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRG
              :.:. ..     : :  :.   .:.              .::           
CCDS13 -------SQEQQMNEIVTIDQPVQIIPASVQS--------------ATPT----------
                  260       270                     280            

      290       300       310       320       330       340        
pF1KB4 KLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTF
                .:.  .:        :....  ..::.:    ...::  .  :...     
CCDS13 ---------TIKVINS--------SAKAA--KVQRAPR---ISGEDRSS--PGNR-----
                             290         300            310        

      350       360       370        380       390       400       
pF1KB4 KDYVRDRADLNKDKPVIPAAALAGYTGS-GPIQLWQFLLELLTDKSCQSFISWTGDGWEF
                                ::. : ::::::::::::::. .. :::.::  ::
CCDS13 -------------------------TGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEF
                                    320       330       340        

       410       420       430       440       450       460       
pF1KB4 KLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLG
       ::..:. ::..::.::::: ::::::::.:::::: ..: :. :::.::.:::::..:.:
CCDS13 KLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIG
      350       360       370       380       390       400        

       470       480                                 
pF1KB4 YTPEELHAMLDVKPDADE                            
       :.  ::. ..                                    
CCDS13 YSAAELNRLVTECEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
      410       420       430       440       450    

>>CCDS59231.1 FLI1 gene_id:2313|Hs108|chr11               (386 aa)
 initn: 642 init1: 425 opt: 465  Z-score: 524.6  bits: 106.2 E(32554): 6.7e-23
Smith-Waterman score: 465; 47.8% identity (72.0% similar) in 157 aa overlap (309-458:138-294)

      280       290       300       310       320       330        
pF1KB4 NMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFD----SED
                                     : : ..:::  :... :::::      ...
CCDS59 DFLRATTLYNTEVLLSHLSYLRESSLLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNN
       110       120       130       140       150       160       

          340       350       360          370       380       390 
pF1KB4 YPAALPNHKPKGTFKDYVRDRADLNKDKP---VIPAAALAGYTGSGPIQLWQFLLELLTD
       . ..: .  : :  .   ..  .  .  :   . :...  .  ::: :::::::::::.:
CCDS59 MNSGLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSD
       170       180       190       200       210       220       

             400       410       420       430       440       450 
pF1KB4 KSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAG
       ..  : :.: : . :::..::::::::::.::.::.:::.::::.:::::::::. :. :
CCDS59 SANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHG
       230       240       250       260       270       280       

             460       470       480                               
pF1KB4 KRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE                          
       :::.:.:                                                     
CCDS59 KRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSS
       290       300       310       320       330       340       

>>CCDS53725.1 FLI1 gene_id:2313|Hs108|chr11               (419 aa)
 initn: 642 init1: 425 opt: 465  Z-score: 524.0  bits: 106.2 E(32554): 7.2e-23
Smith-Waterman score: 465; 47.8% identity (72.0% similar) in 157 aa overlap (309-458:171-327)

      280       290       300       310       320       330        
pF1KB4 NMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFD----SED
                                     : : ..:::  :... :::::      ...
CCDS53 DFLRATTLYNTEVLLSHLSYLRESSLLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNN
              150       160       170       180       190       200

          340       350       360          370       380       390 
pF1KB4 YPAALPNHKPKGTFKDYVRDRADLNKDKP---VIPAAALAGYTGSGPIQLWQFLLELLTD
       . ..: .  : :  .   ..  .  .  :   . :...  .  ::: :::::::::::.:
CCDS53 MNSGLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSD
              210       220       230       240       250       260

             400       410       420       430       440       450 
pF1KB4 KSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAG
       ..  : :.: : . :::..::::::::::.::.::.:::.::::.:::::::::. :. :
CCDS53 SANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHG
              270       280       290       300       310       320

             460       470       480                               
pF1KB4 KRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE                          
       :::.:.:                                                     
CCDS53 KRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSS
              330       340       350       360       370       380

>>CCDS44768.1 FLI1 gene_id:2313|Hs108|chr11               (452 aa)
 initn: 642 init1: 425 opt: 465  Z-score: 523.6  bits: 106.2 E(32554): 7.7e-23
Smith-Waterman score: 465; 47.8% identity (72.0% similar) in 157 aa overlap (309-458:204-360)

      280       290       300       310       320       330        
pF1KB4 NMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFD----SED
                                     : : ..:::  :... :::::      ...
CCDS44 DFLRATTLYNTEVLLSHLSYLRESSLLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNN
           180       190       200       210       220       230   

          340       350       360          370       380       390 
pF1KB4 YPAALPNHKPKGTFKDYVRDRADLNKDKP---VIPAAALAGYTGSGPIQLWQFLLELLTD
       . ..: .  : :  .   ..  .  .  :   . :...  .  ::: :::::::::::.:
CCDS44 MNSGLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSD
           240       250       260       270       280       290   

             400       410       420       430       440       450 
pF1KB4 KSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAG
       ..  : :.: : . :::..::::::::::.::.::.:::.::::.:::::::::. :. :
CCDS44 SANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHG
           300       310       320       330       340       350   

             460       470       480                               
pF1KB4 KRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE                          
       :::.:.:                                                     
CCDS44 KRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSS
           360       370       380       390       400       410   




485 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 03:16:03 2016 done: Fri Nov  4 03:16:04 2016
 Total Scan time:  2.570 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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