GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:08:47

Sequence gi568815589f:111561635_111766937 : 205303 bp : 40.16% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.13 PlyA -    966    961    6                               1.05
 1.12 Term -   1597   1487  111  1  0   66   48   146 0.991   5.98
 1.11 Intr -   8575   8457  119  2  2  118   94   165 0.999  19.36
 1.10 Intr -  13208  13100  109  2  1   81   95    67 0.989   5.64
 1.09 Intr -  17317  17162  156  1  0  100  101   183 0.999  20.09
 1.08 Intr -  21955  21838  118  0  1   78  115   149 0.999  16.15
 1.07 Intr -  24531  24364  168  2  0   93   96    98 0.969   9.24
 1.06 Intr -  31348  31292   57  0  0  108   30    76 0.516   0.88
 1.05 Intr -  32675  32588   88  0  1   77   52    67 0.781   0.11
 1.04 Intr -  35798  35683  116  1  2   94  107    71 0.764   8.77
 1.03 Intr -  38874  38846   29  0  2   72  115    13 0.074  -1.60
 1.02 Intr -  45338  45260   79  1  1  106   99     6 0.859   2.13
 1.01 Init -  47831  47380  452  2  2   41   78   384 0.582  28.13
 1.00 Prom -  61439  61400   40                              -7.25

 2.00 Prom +  63573  63612   40                              -6.75
 2.01 Init +  69774  70109  336  2  0   65  100   463 0.015  40.52
 2.02 Intr +  71160  71277  118  2  1   81   65   -15 0.002  -5.38
 2.03 Intr +  81205  81360  156  2  0   57   14   149 0.113   3.46
 2.04 Intr +  85411  85625  215  2  2   55   91   223 0.686  16.81
 2.05 Intr +  87819  88011  193  2  1   75   32   231 0.557  14.34
 2.06 Intr +  88111  88289  179  2  2   23  105   143 0.543   8.22
 2.07 Term +  91466  91588  123  1  0   68   49   113 0.901   2.80
 2.08 PlyA +  92692  92697    6                               1.05

 3.00 Prom +  94899  94938   40                              -4.25
 3.01 Init +  97379  97424   46  1  1   54   49    49 0.529  -1.50
 3.02 Intr +  99719  99875  157  0  1   88   51   165 0.951  10.95
 3.03 Intr + 100512 100830  319  0  1   66    2   206 0.195   4.84
 3.04 Term + 105181 105306  126  0  0  102   49   143 0.763   9.10
 3.05 PlyA + 108571 108576    6                               1.05

 4.15 PlyA - 109071 109066    6                               1.05
 4.14 Term - 125236 125136  101  2  2  114   49    17 0.368  -2.29
 4.13 Intr - 130799 129917  883  2  1   78   92   240 0.520  13.36
 4.12 Intr - 132728 132597  132  2  0   14   61   118 0.188   1.62
 4.11 Intr - 135869 135707  163  1  1   72   59    61 0.082   0.66
 4.10 Intr - 143730 143613  118  1  1   44  108    84 0.704   4.60
 4.09 Intr - 160951 160775  177  2  0   91  113    58 0.913   7.57
 4.08 Intr - 162277 162158  120  2  0   15   91   110 0.912   3.55
 4.07 Intr - 166415 165999  417  0  0   86  115   308 0.991  26.37
 4.06 Intr - 169493 169192  302  1  2  -10   13   288 0.602   6.95
 4.05 Intr - 175404 175311   94  1  1   46   87    25 0.120  -3.70
 4.04 Intr - 176888 176646  243  0  0   85  101    63 0.252   3.85
 4.03 Intr - 186565 186458  108  2  0  101   75   104 0.986   9.74
 4.02 Intr - 194844 194691  154  0  1   65   78   111 0.213   6.52
 4.01 Intr - 197214 197183   32  1  2  109   78    21 0.103   0.13

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  69774  70313  540  2  0   65   38   557 0.818  42.23
S.002 Term + 202019 202162  144  1  0   62   42   183 0.901   8.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:111561635_111766937|GENSCAN_predicted_peptide_1|533_aa
MLLCQKAPSLKTTYNHPPAADSAGTALNLETTVKQTRETQLEYNNVGTDLSPEPKSFNYP
LLSSSGDQFEIQLNQQLWSLIPNNDVRRLVSHVIRTLKTDCTETHLQLACAKLISRTGLL
MKLLSEQQELRTVSMTAWKPRMNRKSRSRMRQSHFASHAGRWWHNHSTLQPQSPKLQMAE
LSEARRRSFRMVRTKTWTLKKHFVGYPTNSDFELKTAELPPLKNGGLEFLIAYGMLYFVE
VLLEALFLTVDPYMRVAAKRLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSI
SDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGS
VVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKTVESLEETLKKASPDGYDCYFD
NVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQ
GDARQKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVKA

>gi568815589f:111561635_111766937|GENSCAN_predicted_CDS_1|1602_bp
atgctactatgccagaaggcaccatctctgaaaacaacctacaatcatcctcctgcggca
gattccgctgggactgcattaaacttagagacgactgttaaacaaaccagggaaacacag
ttggaatacaacaacgtgggcactgacctgtcccccgaacccaaaagcttcaattaccca
ttgctctcatcctcaggtgaccagtttgaaattcagctaaaccagcagctatggtccctc
atccccaacaacgatgtgagaaggcttgtttctcatgttatccggaccttgaagacggac
tgcactgagacccatttgcaactggcctgtgccaagctcatctctaggacaggcctccta
atgaagcttctcagtgagcagcaagaattgagaactgtatcaatgacagcatggaagccc
agaatgaacagaaagagcagaagtcgaatgagacagtctcactttgccagccatgctgga
aggtggtggcacaatcatagcacactgcagccacaatctcccaagcttcagatggctgaa
ctgagtgaggcaaggagaaggagcttcaggatggttcgtactaagacatggaccctgaag
aagcactttgttggctatcctactaatagtgactttgagttgaagacagctgagctccca
cccttaaaaaatggaggccttgagtttctaattgcctatggaatgctttattttgtagag
gtcctgcttgaagctttgttcctcaccgtggatccctacatgagagtggcagccaaaaga
ttgaaggaaggtgatacaatgatggggcagcaagtggccaaagttgtggaaagtaaaaat
gtagccctaccaaaaggaactattgtactggcttctccaggctggacaacgcactccatt
tctgatgggaaagatctggaaaagctgctgacagagtggccagacacaataccactgtct
ttggctctggggacagttggcatgccaggcctgactgcctactttggcctacttgaaatc
tgtggtgtgaagggtggagaaacagtgatggttaatgcagcagctggagctgtgggctca
gtcgtggggcagattgcaaagctcaagggctgcaaagttgttggagcagtagggtctgat
gaaaaggttgcctaccttcaaaagcttggatttgatgtcgtctttaactacaagacggta
gagtctttggaagaaaccttgaagaaagcgtctcctgatggttatgattgttattttgat
aatgtaggtggagagttttcaaacactgttatcggccagatgaagaaatttggaaggatt
gccatatgtggagccatctctacatataacagaaccggcccacttcccccaggcccaccc
ccagagattgttatctatcaggagcttcgcatggaagcttttgtcgtctaccgctggcaa
ggagatgcccgccaaaaagctctgaaggacttgctgaaatgggtcttagagggtaaaatc
cagtacaaggaatatatcattgaaggatttgaaaacatgccagctgcatttatgggaatg
ctgaaaggagataatttggggaagacaatagtgaaagcatga

>gi568815589f:111561635_111766937|GENSCAN_predicted_peptide_2|439_aa
MGAPLLSPGWGAGAAGRRWWMLLAPLLPALLLVRPAGALVEGLYCGTRDCYEVLGVSRSA
GKAEIARAYRQLARRYHPDRYRPQPGDEGPGRTPQSAEEAFLLVATAYETLKIVFPELKI
VKELTTLLMPSRAVWIIWSHKMSGGGAGPELDIGYVPVLLHMPKRIGSGMDTSRSTTVIP
VEIRNKELIALLVKAQDRQEEETNYKLRPFNGLSYEVGYLVILQDEETRKDYDYMLDHPE
EYYSHYYHYYSRRLAPKVDVRVVILVSVCAISVFQFFSWWNSYNKAISYLATVPKYRIQA
TEIAKQQGLLKKAKEKGKNKKSKEEIRDEEENIIKNIIKIWYCRWIYNFNIKGKEYGEEE
RLYIIRKSMKMSKSQFDSLEDHQKETFLKRELWIKENYEVYKQEQEEELKKKLANDPRWK
RYRRWMKNEGPGRLTFVDD

>gi568815589f:111561635_111766937|GENSCAN_predicted_CDS_2|1320_bp
atgggggcgccgctgctctctcccggctggggagccggggctgccggccggcgctggtgg
atgctgctggcgcccctgctgccggcgctgctgctggtgcggcccgcgggggccctggtg
gaggggctctactgcggcacgcgggactgctacgaggtgctgggcgtgagccgctcggcg
ggcaaggcggagatcgcgcgggcctaccgccagctggcccggcgctaccaccctgaccgc
taccggccccagcccggagacgagggccccgggcggacgccgcagagcgccgaggaggct
ttcctgctggtggcaaccgcctacgagacactcaagattgtttttccagagctgaaaata
gtcaaggagctaacaactttattgatgccttccagagcagtttggataatttggagtcat
aaaatgagtggtggaggggcgggccctgaactagatattggttatgttccagtcctcctg
catatgcccaagaggattgggagtggaatggacaccagcagaagcaccacagttattcct
gtagagattagaaacaaggagcttattgccctgcttgtcaaggctcaggacagacaggag
gaagaaacaaattataaactaaggccatttaatggactgtcctatgaagttggatatctt
gtcattttacaggatgaagaaacacgaaaagattatgattacatgctggatcatccagaa
gagtactacagccattactaccactactatagcaggcgcttggcccctaaggtggatgtt
agagtagtgattttggtcagcgtgtgtgctatttcggtgtttcagtttttcagctggtgg
aatagctacaataaggcaatcagctacctagccacagtgcccaagtaccgtatccaagct
acagagattgccaagcagcagggactgctcaaaaaagccaaagaaaaaggcaaaaacaaa
aagtccaaagaagaaattcgtgacgaggaggagaacatcataaagaacattataaaaatt
tggtattgtcggtggatctataattttaacatcaaaggcaaagaatatggagaggaagag
agattatacattatacgtaaatctatgaagatgtcaaagtctcaatttgatagtctagaa
gatcatcagaaagaaacttttcttaaacgagagctctggatcaaggagaattatgaggtc
tacaagcaagaacaagaggaagaattaaagaaaaagttggcaaatgaccccagatggaag
agatacaggagatggatgaagaatgaagggcctgggcggttaacatttgtggatgactga

>gi568815589f:111561635_111766937|GENSCAN_predicted_peptide_3|215_aa
MDEKSCGESVEHHTDGAPASLEDAALCGSPPRFQAQLQVPPRFQALRSGEHCQLAGVPAV
SGKRLRAGVDGAATRRGREEGEQVWGNDEFGCGPGDSGESSGRYLSSWPEAQRPGLKEVI
QVHWGEKASSMKSRAQSLGPGDQPHRWPVAERRGNKRQQGFRARPREEEIRDSKVSQAAA
ELQQYCMQNACKDALLVGVPAGSNPFREPRSCALL

>gi568815589f:111561635_111766937|GENSCAN_predicted_CDS_3|648_bp
atggatgagaagtcttgtggggaaagtgtggagcatcacacagatggggcgccagcttcg
ctggaggacgccgcgctctgcgggtccccgcctcggttccaggcccagctgcaggtgcca
cccaggtttcaggcgctgaggagcggagagcactgccagctcgctggggtccccgctgtc
tctggcaagcggctccgcgccggggtggacggcgctgccacccgccgaggtagagaggag
ggggaacaggtttggggaaatgatgagttcggctgcggacctggggactccggggagtca
tccgggaggtatttgtcctcatggcctgaagctcagcgcccagggctgaaagaggtcatt
caagtgcattggggcgaaaaagcctcttctatgaagagcagagctcagagcctgggaccc
ggggaccagccacaccgatggccggtggccgagagaagaggaaataagagacagcaaggt
ttccgagcaaggcctagagaagaggaaataagagacagcaaggtctctcaggcagctgca
gagcttcaacagtactgtatgcagaatgcctgcaaggatgccctgctggtgggtgttcca
gctggaagtaaccccttccgggagcctagatcctgtgctttactctga

>gi568815589f:111561635_111766937|GENSCAN_predicted_peptide_4|1014_aa
XLFIDDKGILFPSSFLIEYEFLIPPSLKPEIDIPSLSELKELLNPVPEIINYVDEKEKLF
ERDLTNKHGIEDIGDIKFSSTEILTIQSQSEPEECSKPVPRIQEPHSQYSVTDLKKIFSV
KEESLVINLEKAEWWKQAGLNLKMMETLEHLNTYLCHDNLSSNDTKIEIFLPTKVLQLEL
AILNDMKWYLIVALICISLMIGDVEHFFHTFQSPVQCKALTPFDSMKAEKGKELQKFEAN
RDWFMKFKEKSHLRNIKVQGEATSANVEAAASYPEDLANIIDEDGYTKQQIFNVDETAFY
LKKVLSRTFIATCLEHKSHSSPIALIDEKSTNAHLSLPQKSPSLAKEVPDLCFSDDYFSD
KGAAKEEKPKNDQEPVNRIIQKKENNDHFELDCTGPSIKSPSSSIIKKASFEHGKKQEND
LDLLSDFIMLRNKYKTCTSKTEVTNSDEKHDKEACSLTLQEESPIVHINKTLEEINQERG
TDSVIEIQASDSQCQAFCLLEAAASPILKNLVSLCTLPTANWKFATVIFDQTRFLLKEQE
KVVSDAVRQGSTLLDRFGGFLLEIQIPYVFFASEGLLNTPDILQLLESKDMDEAGNHHSE
QTVTRTENQTLHVLTHRWELNNENTWTQDGEHHTPGPVVGWRELIIAPGVEATALIIRQI
ADHSLMTSKRDPHEWLDKSWLKVSPSEENRNQISTLSSQSSASDLDSVIQEHNEYYQYLG
LGETVQEDKTTILNDNSSIMELKEISSFLPPVTSYNQTSYWKDSSCKSNIGQNTPFLINI
ESRRPAYNSFLNHSDSESDVFSLGLTQMNCETIKSPTDTQKRVSVVPRFINSQKRRTHEA
KGFINKDVSDPIFSLEGTQSPLHWNFKKNIWEQENHPFNLQYGAQQTACNKLYSQKGNLF
TDQQKCLSDESEGLTCESSKDETFWRELPSVPSLDLFRASDSNANQKEFNSLYFYQRAGK
SLGQKRHHESSFNSGDKESLTGFMCSQLPQFKKRRLAYEKVPGRVDGQTRLRFF

>gi568815589f:111561635_111766937|GENSCAN_predicted_CDS_4|3045_bp
natttatttattgatgataaaggaatactttttccgtcaagttttcttattgagtatgaa
ttcttaatacctccaagcctcaaaccagaaattgatattccatcactctcagaactgaag
gagttattaaacccagtgccagaaataataaactatgtagatgaaaaggaaaagcttttt
gaaagagatcttactaacaagcatggaattgaggatatcggggatataaaattcagctcc
acagagattttgaccattcaaagccagagtgaaccagaagagtgcagtaaaccagtgcca
agaattcaagagccccacagccaatattcagttacagatttgaaaaagatattttctgtt
aaagaagaaagccttgtgattaatctggaaaaggcagagtggtggaaacaagcaggacta
aatctgaaaatgatggaaacattggaacatctgaatacatatttatgtcatgataatttg
tcttctaatgacactaaaattgagatatttttgcctacgaaagtgcttcaattagaatta
gccattctgaatgatatgaaatggtacctcattgtagctttgatttgcatttctctgatg
attggtgatgttgagcacttttttcatacattccaaagcccagtacaatgcaaggctcta
actccttttgattctatgaaggctgagaaaggtaaggagctacagaagtttgaagctaac
agagattggttcatgaagtttaaggaaaaaagtcatctccgtaacataaaagtacaaggt
gaagcaacaagtgcaaatgtagaagctgcagcaagttatcctgaagatctggccaatatt
attgatgaagatggctacactaaacaacagatattcaatgtagatgaaacagcgttctat
ttgaagaaagtgttatctaggacttttatagccacatgtctagaacataaaagtcattct
tcacctattgcacttattgatgaaaaatctacaaatgctcatttatcacttccacaaaag
agtccatctctggcaaaagaagtaccagatctatgtttttctgatgactatttctctgat
aaaggagcagcaaaagaagaaaaaccaaagaatgaccaagaaccagtaaacagaataatc
caaaagaaagaaaataacgatcactttgaacttgactgcacaggaccatctattaaatca
ccttcctcttcaataattaaaaaagcatcttttgaacatggcaaaaaacaagagaatgat
ttggaccttttgagcgactttattatgctgcgaaataaatataagacttgcacctcaaag
actgaagtcacaaacagtgatgaaaaacatgataaagaagcatgttctttgacacttcaa
gaagaaagtcctattgttcatattaataaaaccctggaggaaataaatcaggaaagggga
acagatagtgtcattgaaattcaagcgtcagatagccagtgccaagcattttgcctcctc
gaagcagcagcttctcctatcttaaaaaaccttgtatccttgtgtaccctccctactgct
aattggaaatttgccactgttatttttgaccaaacaaggtttctcttaaaggaacaagaa
aaagtagtaagtgatgctgttcgccaaggaagcaccttgctggatagatttggaggtttt
cttttggaaattcagattccatatgtgttttttgcatctgaaggacttcttaatactcca
gacatacttcagctgctagaatccaaggacatggatgaagctggaaaccatcattctgag
caaactgtcacaaggacagaaaaccaaacactgcatgttctcactcataggtgggaattg
aacaatgagaacacttggacacaggatggggaacatcacacaccggggcctgtcgtgggg
tggcgggagcttataattgccccaggagtagaagcaactgccttgataattcgacaaatt
gctgaccacagtttaatgacctcaaagagagatcctcatgaatggttggataaatcctgg
cttaaagtttcaccatctgaggaaaataggaatcagattagtaccttgtcttctcaaagt
tcagcttctgatttagactctgtcattcaagaacataatgaatattatcagtatttagga
ttaggagagacagtgcaggaagacaaaaccaccattttgaatgacaactcttccattatg
gaactaaaagaaatctcaagttttttaccacctgtgacttcatacaatcagaccagctac
tggaaagactccagctgtaaatctaatatagggcagaatactccttttctaattaatata
gaatcaaggagaccggcttataactcctttctaaaccacagtgattcagagtcagatgtc
ttttctttgggtctaacacaaatgaactgtgaaactataaaatcaccaactgacactcag
aagagagtgtcagttgtcccccgttttataaattctcagaaaaggagaacacatgaagca
aaaggtttcataaataaagatgtatcggaccctatcttttcactagagggcactcaatct
cctcttcattggaactttaagaaaaatatatgggaacaagagaatcacccgttcaactta
caatatggtgcacagcagactgcatgtaacaaattgtactctcagaaaggtaatttattc
actgatcagcaaaaatgtctatcagatgagtctgaaggcctcacatgtgaaagttcaaaa
gatgagactttctggagagaattaccatctgtccccagtttggatttatttcgtgcttct
gattctaatgcaaatcaaaaagaattcaacagcctttatttctaccaaagagctggaaaa
agtttaggacagaaaaggcaccatgaatcttcatttaactcaggagacaaggaatcatta
acaggttttatgtgctcacaactaccacaattcaaaaaacgacgtctagcatatgaaaaa
gtccctggtagagttgatgggcagactcggctgaggtttttttga