GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:08:15

Sequence gi568815596f:65127910_65368731 : 240822 bp : 42.91% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   1888   2105  218  2  2  102   44   268 0.624  20.12
 1.02 PlyA +   3276   3281    6                               1.05

 2.00 Prom +   7190   7229   40                              -8.75
 2.01 Init +  23933  23989   57  1  0   96   94   108 0.908  13.56
 2.02 Term +  28535  28558   24  1  0  110   37    61 0.809   0.45
 2.03 PlyA +  29242  29247    6                               1.05

 3.04 PlyA -  29274  29269    6                               1.05
 3.03 Term -  33242  33188   55  1  1  108   46    47 0.389  -1.45
 3.02 Intr -  35346  35240  107  0  2   80   63    61 0.422   0.89
 3.01 Init -  37972  37802  171  1  0   75   83   126 0.952  10.29
 3.00 Prom -  44560  44521   40                              -7.05

 4.04 PlyA -  45057  45052    6                               1.05
 4.03 Term -  48278  48088  191  0  2   86   43    81 0.505   0.03
 4.02 Intr -  49816  49649  168  2  0   75   81    67 0.383   3.70
 4.01 Init -  50115  49908  208  0  1   41  100    98 0.376   3.60
 4.00 Prom -  52698  52659   40                              -6.95

 5.00 Prom +  53843  53882   40                              -5.15
 5.01 Sngl +  61152  61448  297  2  0   68   50   227 0.951  12.40
 5.02 PlyA +  62473  62478    6                               1.05

 6.00 Prom +  68703  68742   40                              -3.95
 6.01 Init +  77200  78051  852  0  0  106   53   826 0.003  75.59
 6.02 Intr +  99526  99710  185  0  2   53   51   164 0.001   6.86
 6.03 Intr + 100826 100832    7  2  1   97   95     0 0.000  -5.58
 6.04 Intr + 111943 112053  111  0  0   86   85    94 0.933   8.56
 6.05 Intr + 118615 118830  216  0  0   29  105   236 0.982  17.18
 6.06 Intr + 123118 123190   73  0  1  112  100    40 0.992   5.66
 6.07 Intr + 125819 125955  137  0  2   87  115    11 0.986   3.07
 6.08 Intr + 127636 127785  150  0  0   67   98   164 0.999  14.74
 6.09 Intr + 133338 133483  146  2  2   76   88   177 0.999  14.66
 6.10 Intr + 137134 137266  133  1  1   79   84   122 0.999  10.63
 6.11 Intr + 140655 140808  154  2  1  118   42   198 0.004  16.92
 6.12 Intr + 143836 143858   23  2  2   68   83    19 0.000  -4.26
 6.13 Intr + 158214 158500  287  2  2   78   48   208 0.510  11.02
 6.14 Intr + 162823 162973  151  1  1   60   29   128 0.600   3.34
 6.15 Intr + 163643 163847  205  1  1   86   70    84 0.558   4.25
 6.16 Term + 164624 164772  149  0  2   50   52   125 0.624   2.18
 6.17 PlyA + 164960 164965    6                               1.05

 7.00 Prom + 169871 169910   40                              -5.55
 7.01 Sngl + 173702 173968  267  1  0   75   42   203 0.568   9.39
 7.02 PlyA + 175192 175197    6                               1.05

 8.14 PlyA - 177062 177057    6                               1.05
 8.13 Term - 182912 182732  181  1  1   36   48   168 0.339   3.70
 8.12 Intr - 185134 185046   89  1  2   53   83    52 0.068  -0.95
 8.11 Intr - 186260 185832  429  2  0   68   88   457 0.127  36.69
 8.10 Intr - 188974 188825  150  1  0  107   99   121 0.581  14.54
 8.09 Intr - 192692 192426  267  2  0   43   37   139 0.028   1.11
 8.08 Intr - 204142 204078   65  2  2  108   98    98 0.970  10.32
 8.07 Intr - 206864 206696  169  2  1  106   67   209 0.880  19.20
 8.06 Intr - 207123 206978  146  1  2   34   12   217 0.955   7.78
 8.05 Intr - 213118 213022   97  1  1  139   89    25 0.866   6.36
 8.04 Intr - 216987 216810  178  2  1  109   55   183 0.267  16.10
 8.03 Intr - 226592 226514   79  0  1   74   73    32 0.003  -2.01
 8.02 Intr - 231002 230910   93  0  0  104   63    25 0.005   0.62
 8.01 Init - 238915 238786  130  1  1   45   76   120 0.505   6.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  70576  70674   99  0  0   95   99    65 0.918   8.61
S.002 Sngl +  77200  78081  882  0  0  106   36   865 0.995  78.87
S.003 Term + 140655 140825  171  2  0  118   37   249 0.996  19.64


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:65127910_65368731|GENSCAN_predicted_peptide_1|72_aa
XDAPTSAPTLLDPFKIPQAGPRTQPTGALLNSLFGIHAGHVTAAAAAATAALAAAAAALT
LRATGNRKKGMR

>gi568815596f:65127910_65368731|GENSCAN_predicted_CDS_1|219_bp
nccgatgccccgacttctgccccaaccctcctcgacccctttaagatcccccaagctggc
ccacggacccagccgaccggtgctctcctgaactcactattcgggattcatgctggacat
gtcactgcagctgccgccgccgccaccgccgcccttgctgccgcagccgccgccctgact
ctccgcgccacgggtaatcgaaagaaaggaatgagatag

>gi568815596f:65127910_65368731|GENSCAN_predicted_peptide_2|26_aa
MRPQTATVDEEDPNLEKTQIVDEIYA

>gi568815596f:65127910_65368731|GENSCAN_predicted_CDS_2|81_bp
atgaggccacagacagcaactgtggatgaagaggatccaaatctggagaagacgcagatt
gtggacgagatctatgcatga

>gi568815596f:65127910_65368731|GENSCAN_predicted_peptide_3|110_aa
MDVWAFTRHRYFHINSRCFVTGEELEKKGSVSMQRQQGKLTMQPKQGGKQLVKDHVLLCP
RTRYRKGVCPEAADTLFYVSCGQAMNNIYDERRTHPECDPFLPLPLYTLV

>gi568815596f:65127910_65368731|GENSCAN_predicted_CDS_3|333_bp
atggacgtgtgggcttttacaagacacagatattttcacatcaactctagatgctttgtt
actggggaagaacttgagaaaaagggaagtgtctccatgcaacggcaacaagggaaactc
actatgcagccaaaacagggaggaaaacaacttgtaaaagatcatgtgttattatgccca
aggaccaggtacaggaaaggagtttgccctgaagctgcagataccctattttatgtcagc
tgtggacaggctatgaataatatttacgacgaaagaagaactcatccagaatgtgatcct
tttttacccctgccactctacacgctggtttga

>gi568815596f:65127910_65368731|GENSCAN_predicted_peptide_4|188_aa
MGALPRFCWKGGSPALRGTAAAAQSQMWNPVSLNSQRPGRPPAPHSLGCACSHCLASPHS
WCLLQLQSKDCGRLMSMGGRLSGGRRQLDVGLQVLFGMNSLGAMGTMDGRVMAAGGRQAP
GQKKAGTGACSRSCVQYIWFSHSLARGLCWHLELLALLQQPARLAVHSGWTPRLLTYTIL
AALRLVCV

>gi568815596f:65127910_65368731|GENSCAN_predicted_CDS_4|567_bp
atgggagccctgccccgtttttgttggaagggtgggagccctgccctccggggcacagct
gcagctgcccagtcgcagatgtggaatccagtatccctgaactctcagcgaccaggaagg
ccccctgccccccacagtcttgggtgtgcctgctcccactgcctggcctctccccactcc
tggtgcctgctccaacttcagagcaaagactgtgggcgcctaatgagcatgggagggagg
ctgagtgggggccgaaggcagcttgatgtgggcctgcaggtgctctttggcatgaacagc
ctgggtgccatgggcaccatggatggcagagtgatggcagcaggaggcagacaggctcct
gggcagaaaaaggcaggtacgggtgcctgcagcagaagctgcgtgcagtatatctggttc
agtcacagccttgcacggggcctgtgctggcacctggagctgcttgccctgctgcagcag
ccagcacgcctggctgtgcacagtgggtggaccccgcgcttgctcacctacacaatcctc
gcagctctgcgcctggtttgcgtttag

>gi568815596f:65127910_65368731|GENSCAN_predicted_peptide_5|98_aa
MSSENILQAKVARGGRVERAVLDVDYTPSEDRAKYGWFLWTKCGSWVPLGSFPRKTMGSQ
KRGGLKDDRERSKWQSDERHYQESLRDSRRGSPGISIP

>gi568815596f:65127910_65368731|GENSCAN_predicted_CDS_5|297_bp
atgagttctgaaaacattctccaggccaaagtggccagaggtggcagagtagagagggct
gtgttagatgtggactacacgccctctgaggacagggcaaagtacgggtggttcttatgg
accaaatgtggatcctgggtccctcttggatccttccctagaaagaccatgggatcccaa
aagagaggtggcctgaaagatgacagggagcggtcaaaatggcagtcagatgagaggcat
taccaggaatctctgagggactcaaggaggggaagccctgggatctccatcccctag

>gi568815596f:65127910_65368731|GENSCAN_predicted_peptide_6|992_aa
MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
KSGKIKSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFA
VGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPT
ASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKLLRHIPLPQQNRCPSP
ACVFCSSLSSALSSCDTLGRKPQHRRCWPPLTPGKAPGTRSSEEPGIQFVKCGYAGSNFP
EHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRNWDDMKHL
WDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYA
QGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSA
DFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQP
HLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLER
VLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK
LGPESQTANCHEGTSKISESYNVTYGRRHEKQDMQQRASLEMAGAGAGGSNKSVILKGVF
MCSLRVSCEENSQGDTDYETARALELFAKSRSQGFTPSPDQKQGITGGEVLLESSGERPG
MLLNIPQCTGQPPHKSKVAQNVNSVEVEKPCVRVRSDDDCLGNTQESLNCSQDLVETTPV
SVTSRPWVFITIAILEEHSCTKAPRASSLCHKYPKKNVSELFQGLHPFLLEKSLPKPAHT
APGRRRRGEASQPFSETSNSPGLELVPFSAQR

>gi568815596f:65127910_65368731|GENSCAN_predicted_CDS_6|2979_bp
atggcgacccacggacagacttgcgcgcgtccaatgtgtattcctccatcatatgctgac
cttggcaaagctgccagagatattttcaacaaaggatttggttttgggttggtgaaactg
gatgtgaaaacaaagtcttgcagtggcgtggaattttcaacgtccggttcatctaataca
gacactggtaaagttactgggaccctggagaccaaatacaagtggtgtgagtatggtctg
actttcacagaaaagtggaacactgataacactctgggaacagaaatcgcaattgaagac
cagatttgtcaaggtttgaaactgacatttgatactaccttctcaccaaacacaggaaag
aaaagtggtaaaatcaagtcttacaagagggagtgtataaaccttggttgtgatgttgac
tttgattttgctggacctgcaatccatggttcagctgtctttggttatgagggctggctt
gctggctaccagatgacctttgacagtgccaaatcaaagctgacaaggaataactttgca
gtgggctacaggactggggacttccagctacacactaatgtcaatgatgggacagaattt
ggaggatcaatttatcagaaagtttgtgaagatcttgacacttcagtaaaccttgcttgg
acatcaggtaccaactgcactcgttttggcattgcagctaaatatcagttggatcccact
gcttccatttctgcaaaagtcaacaactctagcttaattggagtaggctatactcagact
ctgaggcctggtgtgaagcttacactctctgctctggtagacgggaagagcattaatgct
ggaggccacaagcttctccgccacattccactgccgcagcagaaccggtgtccttcacct
gcctgcgtcttctgcagttcgttaagcagcgcccttagctcctgtgacactttagggaga
aagccgcagcaccggcgatgttggccgccattaacgcccggcaaagcgcccggaactaga
agcagcgaagaacccggtatacagtttgtgaagtgtggatatgcaggctctaactttcca
gaacacatcttcccagctttggttggaagacctattatcagatcaaccaccaaagtggga
aacattgaaatcaaggatcttatggttggtgatgaggcaagtgaattacgatcaatgtta
gaagttaactaccctatggaaaatggcatagtacgaaattgggatgacatgaaacacctg
tgggactacacatttggaccagagaaacttaatatagataccagaaattgtaaaatctta
ctcacagaacctcctatgaacccaaccaaaaacagagagaagattgtagaggtaatgttt
gaaacttaccagttttccggtgtatatgtagccatccaggcagttctgactttgtacgct
caaggtttattgactggtgtagtggtagactctggagatggtgtgactcacatttgccca
gtatatgaaggcttttctctccctcatcttaccaggagactggatattgctgggagggat
ataactagatatcttatcaagctacttctgttgcgaggatacgccttcaaccactctgct
gattttgaaacggttcgcatgattaaagaaaaactgtgttacgtgggatataatattgag
caagagcagaaactggccttagaaaccacagtattagttgaatcttatacactcccagat
ggacgtatcatcaaagttgggggagagagatttgaagcaccagaagctttatttcagcct
cacttgatcaatgttgaaggagttggtgttgctgaattgctttttaacacaattcaggca
gctgacattgataccagatctgaattctacaaacacattgtgctttctggagggtctact
atgtatcctggcctgccatcacggttggaacgagaacttaaacagctttacttagaacga
gttttgaagggtgatgtggaaaaactttctaaatttaagatccgcattgaagacccaccc
cgcagaaagcacatggtattcctgggtggtgcagttctagcggatatcatgaaagacaaa
gacaacttttggatgacccgacaagagtaccaagaaaagggtgtccgtgtgctagagaaa
cttgggccggagtcccagacagcgaactgccatgaagggacatcaaagataagcgaatca
tacaatgtaacctatggcaggaggcatgagaaacaagatatgcaacagagggcctctttg
gaaatggcaggagcaggggctggaggcagcaacaaaagtgtcatcttgaaaggcgtcttc
atgtgcagcttgagagtcagctgtgaggaaaatagccaaggagacacagactatgagact
gcccgtgccctagagctctttgcaaaatcaaggtctcagggcttcaccccatcccctgac
caaaagcaagggataactgggggtgaggtgcttcttgaatctagtggggagaggcctggg
atgctgctgaacatcccacaatgcacaggacagccccctcacaagagtaaagtggcccaa
aatgtcaatagtgttgaggttgagaaaccctgtgttagagttaggtctgatgatgactgt
ttagggaatacccaagagagtctaaattgctcacaggatttggtagaaaccactcccgtt
tcagtcaccagccggccctgggtctttatcacaattgctatcctagaggaacacagctgc
acgaaggcaccaagggcttcctccttatgccacaaatatcctaagaagaatgtctcagaa
ttatttcaagggcttcatcccttcctgctggagaaatcgctgccaaagcctgctcacaca
gcccctgggcggcggaggcgaggtgaagccagtcagcctttctccgagacttccaactca
ccgggcctggagctcgtccccttctcagcccagcgctga

>gi568815596f:65127910_65368731|GENSCAN_predicted_peptide_7|88_aa
MRQRQLLPRLDKRGKNVGWILQQAPNVDSKDPRMSVEAEQAHLTPLAASPSDSREVSQRH
ETWHQLPDQDETMNQSECSRITLSWGCI

>gi568815596f:65127910_65368731|GENSCAN_predicted_CDS_7|267_bp
atgagacagaggcagctattacccaggctcgacaaaagaggaaaaaacgtgggatggatt
ttgcaacaagccccaaatgttgattccaaggacccgaggatgagtgtagaagcggagcag
gcacacctgacacccctcgcggcatccccttcagattcccgggaagtctcacagagacat
gaaacctggcatcagctccctgaccaagatgagaccatgaaccagtcagaatgttcacga
atcacattgtcctggggatgcatttag

>gi568815596f:65127910_65368731|GENSCAN_predicted_peptide_8|690_aa
MTQQAYKMRTNPRMTHPVQCSIFVKETESYMGETTSQAASWFSDRKALGQNPARAERNWP
FWQWGKRLLVKETVRFIRVQATGDKHLEVKFKIAFKHSTMHDSYIVRVKAVVMTRDDSSG
GWFPQEGGGISRVGVCKVMHPEGNGRSGFLIHGERQKDKLRYDNSSFGLSSFSNAMLVPT
GDHAPTWELCKCARRKRNNRDEESVVKGYNQDSGEQRRSDGQQPSKASFPIGETHRYVKA
GVVLECYVRKDLVYTKANPTFHHWKVDNRKFGLTFQSPADARAFDRGVRKAIEDLIEGST
TSSSTIHNEAELGDDDVFTEAVDCGHASRGLLAFLLHCRNSSSDKAFLSLTSSDKCLGSF
ALDCAGREGWGGGMGISEGSISDRLMSPRKSRMCLISQKDFLHIVNPKTATDSSSNSSQK
REQPTRTISSPTSCEHRRIYTLGHLHDSYPTDHYHLDQPMPRPYRQVSFPDDDEEIVRIN
PREKIWMTGYEDYRHAPVRGKYPDPSEDADSSYVRFAKGEVPKHDYNYPYVDSSDFGLGE
DPKGRGGSVIKTQPSRGKSRRRKEDGERSRCVYCRDMFNHEENRRGHCQDAPDSVRTCIR
RQASGSAEMGCENDETRQKYLSLQSVIMYRRRRGDARALADLGVPAYRMGQGFLCRRTCG
HRSVFSRPFPPMVMSYSQGETAAPWARMPQ

>gi568815596f:65127910_65368731|GENSCAN_predicted_CDS_8|2073_bp
atgacacaacaggcctataaaatgcggactaaccctcggatgactcatccggtacaatgc
agtatatttgtcaaggagactgaatcatatatgggggaaaccacttctcaggcagccagc
tggttctcagataggaaagcccttggccaaaacccagcaagagctgagaggaactggcct
ttctggcagtggggaaagaggcttcttgtcaaggagactgtcagatttatacgtgttcaa
gctacaggagataaacacttagaggtgaaatttaaaattgcgtttaaacacagtacaatg
catgacagctatattgtgcgtgtcaaggctgtggttatgaccagagatgactccagcggg
ggatggttcccacaggaaggaggcgggatcagtcgcgtcggggtctgtaaggtcatgcac
cccgaaggcaatggacgaagcggctttctcatccatggtgaacgacagaaagacaaactg
agatatgataactcttcctttggcctctcaagcttctctaatgcaatgctagtgcccact
ggagaccatgcgcccacatgggagctctgcaaatgtgccaggaggaagaggaataaccgt
gatgaagagagtgtagtgaaggggtacaaccaggacagtggggagcagcgaagatcggat
ggtcagcagccaagcaaagcctcctttcccattggagagactcacagatatgtgaaggca
ggggtggtattggaatgctatgtaagaaaggacttggtctacaccaaagccaatccaacg
tttcatcactggaaggtcgataataggaagtttggacttactttccaaagccctgctgat
gcccgagcctttgacaggggagtaaggaaagcaatcgaagaccttatagaaggttcaaca
acgtcatcttccaccatccataatgaagctgagcttggcgatgatgacgtttttacagag
gcagtagactgtggacatgcctctcgaggtcttctggccttcttgcttcactgtagaaat
tcgtcatcagataaggcctttctcagtctcacatcctctgacaaatgtctggggagcttt
gcactggactgtgcagggagagagggctggggaggtgggatgggaatatcggaaggtagc
atttctgatcgactaatgagtcctaggaaaagccggatgtgcctcatttctcagaaggac
tttctacacattgttaacccaaaaacagctacagacagttcttctaattcctctcagaag
agagagcaacctactcggacaatctcctctcccacatcctgtgagcaccggaggatttat
accctgggccacctccacgactcataccccacagaccactatcacctcgatcagccgatg
ccaaggccctaccgccaggtgagcttcccggacgacgacgaggagatcgtgcgcatcaac
ccccgggagaagatctggatgacggggtacgaggattaccggcacgcacccgtcaggggc
aagtacccggacccctcggaggacgcggactcctcctacgtgcgcttcgccaagggcgag
gtccccaagcatgactacaactacccctacgtggactcctcagactttggcctaggcgag
gaccccaaaggccgcgggggcagcgtgatcaagacgcagccctcccggggcaagtcgcgg
cggcggaaggaggacggagagcgctcgcggtgcgtgtactgcagggacatgttcaaccac
gaggagaaccgccggggccactgccaggacgcgcccgactccgtgagaacttgcatccgc
cggcaagcatctggttcagcggaaatgggatgtgagaatgatgaaacccgacagaagtat
ctcagcctgcagtcagttattatgtataggaggagacgaggtgatgctagagcgttggca
gatcttggagttcccgcatacaggatgggacagggcttcctgtgccgaaggacatgtgga
caccggtctgttttttcaaggccctttcctcctatggttatgtcatattcccaaggggag
actgcagctccttgggctcggatgcctcagtga