GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:03:58

Sequence gi568815596f:189823336_190024213 : 200878 bp : 36.88% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2610   2665   56  2  2   84   73    84 0.941   7.31
 1.02 Intr +   8124   8178   55  0  1   56   42    88 0.165  -0.94
 1.03 Intr +  20629  20745  117  0  0   83   74    80 0.372   5.84
 1.04 Intr +  30604  30747  144  0  0   41   88   123 0.981   7.16
 1.05 Intr +  30904  31793  890  0  2   99  100   549 0.964  46.38
 1.06 Intr +  40408  40893  486  1  0   70   64   234 0.944  10.40
 1.07 Intr +  44464  44594  131  1  2   59   80    74 0.880   3.12
 1.08 Intr +  50161  50321  161  2  2  114   85    68 0.991   7.89
 1.09 Term +  56059  56505  447  0  0   27   39   307 0.745  13.93
 1.10 PlyA +  56957  56962    6                               1.05

 2.04 PlyA -  57058  57053    6                               1.05
 2.03 Term -  65631  65232  400  2  1   57   42   191 0.181   5.00
 2.02 Intr -  69199  69044  156  0  0   48   71   115 0.272   4.00
 2.01 Init -  70334  70276   59  2  2  110   60    76 0.907   7.83
 2.00 Prom -  75260  75221   40                              -4.95

 3.00 Prom +  82996  83035   40                              -2.55
 3.01 Sngl + 100001 100807  807  1  0   84   43   917 0.999  82.35
 3.02 PlyA + 101148 101153    6                               1.05

 4.00 Prom + 104417 104456   40                              -3.45
 4.01 Init + 115060 115119   60  0  0   72  115    23 0.676   4.70
 4.02 Intr + 115734 115899  166  2  1   96   68    49 0.271   2.31
 4.03 Intr + 119135 119228   94  0  1   43   80    49 0.160  -2.30
 4.04 Term + 120272 120479  208  2  1   41   44   167 0.446   3.43
 4.05 PlyA + 121577 121582    6                               1.05

 5.03 PlyA - 122471 122466    6                               1.05
 5.02 Term - 141344 141073  272  0  2   47   48   223 0.807   8.86
 5.01 Init - 141386 141368   19  2  1   50   63    12 0.331  -4.87
 5.00 Prom - 148136 148097   40                              -3.45

 6.02 PlyA - 148417 148412    6                               1.05
 6.01 Sngl - 149908 148652 1257  1  0   34   32   354 0.938  20.00
 6.00 Prom - 167710 167671   40                              -5.25

 7.02 PlyA - 168645 168640    6                               1.05
 7.01 Sngl - 174963 174637  327  0  0   87   48   160 0.612   7.66
 7.00 Prom - 182615 182576   40                              -5.85

 8.02 PlyA - 184923 184918    6                               1.05
 8.01 Sngl - 192422 191682  741  2  0   -1   48   451 0.969  28.15
 8.00 Prom - 194427 194388   40                              -6.25

 9.03 PlyA - 194689 194684    6                               1.05
 9.02 Term - 195700 195464  237  1  0   68   49   165 0.950   5.78
 9.01 Intr - 198356 198192  165  2  0    8  115    66 0.249   0.54

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:189823336_190024213|GENSCAN_predicted_peptide_1|828_aa
MQALNQEQRPKKLAVEIWHYYEEESMGLAVSGKGPEKAVIWQKSRVSDHKMALMSVLGTA
VMNNMESFQYHSEESQLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVL
LQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVLSKTAETDVLFNKVESSGK
NYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGHCSSEISNIDKNTKNAFQD
ISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGENEEEAGLENSSEISADEW
SRGNILKNSVGENIEPVKILVPEKSLPCKVSNNNYPIPEQMNLNEDSCNKKSNVIDNKSG
KVTAYDLLSNRVIKKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKL
KYEEKATKDLERYNSQMKRAIEQESQMSLKDGRKKIKPTSAWNLAQKHKLKTSLSNQPKL
DELLQSQIEKRRSQNIKMVQIPFSMKNLKINFKKQNKVDLEEKDEPCLIHNLRFPDAWLM
TSKTEVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTESLFNGSHYLDVLYKMTAD
DQRYSGSTYLSDPRLTANGFKIKLIPGVSITENYLEIEGMANCLPFYGVADLKEILNAIL
NRNAKEVYECRPRKVISYLECWDYPPRLAGNVFLTVTGVADWREQEWASGEGLALPHGPI
LVDEAKGSLATTQKPGNLPQRSHPPQVLTTAPAPPAGPNAEAGSGDREALAPRMEVTAAA
AWEAYPELRARRGDPKEKESFTPSYPFASLGWVARALGLGEGLLRYEF

>gi568815596f:189823336_190024213|GENSCAN_predicted_CDS_1|2487_bp
atgcaggcccttaaccaggaacagagacccaaaaaactggccgtggagatttggcactat
tatgaggaagaatcaatgggactagctgtgagtggcaaaggaccagaaaaggcagttatt
tggcagaaaagcagagtatcagatcacaagatggctctcatgtcagttctggggactgct
gttatgaacaatatggaatcctttcagtaccactctgaagaatctcagttaatccgacat
cattacaatctgaaatgcctaaaggaatctactcgtttgtatcctgttttctttctgaaa
atcgatgttcctacagctgatgttgatgtaaatttaacaccagataaaagccaagtatta
ttacaaaataaggaatctgttttaattgctcttgaaaatctgatgacgacttgttatgga
ccattacctagtacaaattcttatgaaaataataaaacagatgtttccgcagctgacatc
gttcttagtaaaacagcagaaacagatgtgctttttaataaagtggaatcatctggaaag
aattattcaaatgttgatacttcagtcattccattccaaaatgatatgcataatgatgaa
tctggaaaaaacactgatgattgtttaaatcaccagataagtattggtgactttggttat
ggtcattgtagtagtgaaatttctaacattgataaaaacactaagaatgcatttcaggac
atttcaatgagtaatgtatcatgggagaactctcagacggaatatagtaaaacttgtttt
ataagttccgttaagcacacccagtcagaaaatggcaataaagaccatatagatgagagt
ggggaaaatgaggaagaagcaggtcttgaaaactcttcggaaatttctgcagatgagtgg
agcaggggaaatatacttaaaaattcagtgggagagaatattgaacctgtgaaaatttta
gtgcctgaaaaaagtttaccatgtaaagtaagtaataataattatccaatccctgaacaa
atgaatcttaatgaagattcatgtaacaaaaaatcaaatgtaatagataataaatctgga
aaagttacagcttatgatttacttagcaatcgagtaatcaagaaacccatgtcagcaagt
gctctttttgttcaagatcatcgtcctcagtttctcatagaaaatcctaagactagttta
gaggatgcaacactacaaattgaagaactgtggaagacattgagtgaagaggaaaaactg
aaatatgaagagaaggctactaaagacttggaacgatacaatagtcaaatgaagagagcc
attgaacaggagtcacaaatgtcactaaaagatggcagaaaaaagataaaacccaccagc
gcatggaatttggcccagaagcacaagttaaaaacctcattatctaatcaaccaaaactt
gatgaactccttcagtcccaaattgaaaaaagaaggagtcaaaatattaaaatggtacag
atccccttttctatgaaaaacttaaaaataaattttaagaaacaaaacaaagttgactta
gaagagaaggatgaaccttgcttgatccacaatctcaggtttcctgatgcatggctaatg
acatccaaaacagaggtaatgttattaaatccatatagagtagaagaagccctgctattt
aaaagacttcttgagaatcataaacttcctgcagagccactggaaaagccaattatgtta
acagagagtctttttaatggatctcattatttagacgttttatataaaatgacagcagat
gaccaaagatacagtggatcaacttacctgtctgatcctcgtcttacagcgaatggtttc
aagataaaattgataccaggagtttcaattactgaaaattacttggaaatagaaggaatg
gctaattgtctcccattctatggagtagcagatttaaaagaaattcttaatgctatatta
aacagaaatgcaaaggaagtttatgaatgtagacctcgcaaagtgataagttatttagag
tgctgggattacccaccgcgcctggccggcaacgttttcctaacggtgactggagtagca
gactggcgtgaacaggaatgggcttcaggtgagggtctagcgttgccccacggaccaatc
ctggttgacgaggctaagggaagcctagcaaccacgcagaagcccggcaatcttccgcag
cgctcccatcctccacaagtccttacaacagccccagcaccacccgcgggaccaaatgct
gaagctgggagcggcgacagggaagcgctggctcccagaatggaggtaacggctgctgcg
gcctgggaggcttacccggaattaagggcgaggcgaggagatccgaaggaaaaggaaagc
ttcaccccaagttacccatttgcctctttaggctgggttgccagagcccttggcctggga
gaaggacttttaaggtatgagttctaa

>gi568815596f:189823336_190024213|GENSCAN_predicted_peptide_2|204_aa
MAEQEQLWSAAPSEINTEGRVWNGPPANTSRPASEGPVRRKTNKHKGIASTSTKRMSTQK
PHPKVTNIKDQSIGSSPIRQEKERKGIQMGRQEVKLSLFADDMIVYLENPIISAQNLLKL
TTNFSKVSGYKINVQKSQAFLNTNNRQTESQIMSELPFTIATKRIKYLGIQLTRDVKDLF
KENYKPLLKEIREDTNKWKNIPCS

>gi568815596f:189823336_190024213|GENSCAN_predicted_CDS_2|615_bp
atggccgaacaggaacagctctggtctgcagctcccagtgagatcaacacagaaggcagg
gtctggaatggaccaccagcaaataccagcagacctgcatcagaggggcctgttagaagg
aaaactaacaaacataaaggaatagcatcaacatcaacaaaaaggatgtctacacagaaa
ccgcacccgaaagtcaccaacatcaaagaccaaagtattggaagttctccaatcaggcaa
gagaaagaaagaaagggtattcaaatgggaagacaggaagtcaaattgtccctgtttgca
gatgacatgattgtatatttagaaaaccccatcatctcagctcaaaatctccttaagctg
acaaccaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattc
ttaaacaccaataacagacaaacagagagccaaatcatgagtgaactcccattcacaatt
gctacaaagagaataaaatacctaggaatacaacttacaagggatgtgaaggacctcttc
aaggagaactacaaaccactgctcaaggaaataagagaggacacaaacaaatggaaaaac
attccatgctcatga

>gi568815596f:189823336_190024213|GENSCAN_predicted_peptide_3|268_aa
MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFFQYVNE
RNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSSFDLDCDFQRDYY
DRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSQRGISGFNSKSGQRGSSKSGKLKGDDL
QAIKRELTQIKQKVDSFLENLEKIEKEQSKQAVEMNNVKSEEEQSSSSVKKDETNVKMES
EGGADDSAEEGDLLDDDDNEDGGMTSWS

>gi568815596f:189823336_190024213|GENSCAN_predicted_CDS_3|807_bp
atggccagcaacgttaccaacaagacagatcctcgttccatgaactcccgtgtattcatt
gggaatctcaacactcttgtggtcaagaaatctgatgtggaggcaatcttttcgaagtat
ggcaaaattgtgggctgctctgttcataagggctttgccttctttcagtatgttaatgag
agaaatgcccgggctgctgtagcaggagaggatggcagaatgattgctggccaggtttta
gatattaacctggctgcagagccaaaagtgaaccgaggaaaagcaggtgtgaaacgatct
gcagcggagatgtacggctcctcttttgacttggattgtgactttcaacgggactattat
gataggatgtacagttacccagcacgtgtacctcctcctcctcctattgctcgggctgta
gtgccctcgaaacgtcagcgtgtatcaggaaacacttcacaaaggggcataagtggcttc
aattctaagagtggacagcggggatcttccaagtctggaaagttgaaaggagatgacctt
caggccattaagagggagctgacccagataaaacaaaaagtggattctttcctggaaaac
ctggaaaaaattgaaaaggaacagagcaaacaagcagtagagatgaacaatgttaagtca
gaagaggagcagagcagcagctccgtgaagaaagatgagactaatgtgaagatggagtct
gaggggggtgcagatgactctgctgaggagggggacctactggatgatgatgataatgaa
gatggggggatgaccagctggagttga

>gi568815596f:189823336_190024213|GENSCAN_predicted_peptide_4|175_aa
MKKNEIQSFSTTWMELEVIMEALGVCEGRNIPEDSQRQSREVGLSSPAMETLLCYSTKGD
AKSISVAFQWHHAVGAEQPNTENWYQKWGFTIKVPQNVETTSELGNRPQNGKSTSSLHPE
PGKAAGTQHQLLKAAMGAEPCKATEVELPRPLEPTPCTSLPWMWDMESLEIILEL

>gi568815596f:189823336_190024213|GENSCAN_predicted_CDS_4|528_bp
atgaaaaagaatgagattcagtcattttcaacaacatggatggaactggaggtcattatg
gaagcattgggagtgtgtgaaggaagaaatattcctgaggacagccagagacaaagcagg
gaggtgggactatcatccccagccatggaaactctgctctgttactccaccaaaggagat
gccaaatcaatcagtgtggcctttcagtggcaccatgctgtaggagcagaacagcctaac
acagaaaattggtaccagaagtggggctttactataaaggtacctcaaaatgtggaaaca
acttcagaactaggtaacagaccccagaatggtaaatccaccagcagcttgcaccctgaa
cctggaaaagctgcaggcactcaacaccagctcttgaaagcagccatgggggctgaaccc
tgcaaagccacagaggtggagctcccaaggcctttggagcccaccccttgcaccagtttg
ccttggatgtgggatatggagtcactggagattattttggagctttaa

>gi568815596f:189823336_190024213|GENSCAN_predicted_peptide_5|96_aa
MFETNIGSHIHNIKVQGEAASADVEATSYPEDLAKIIDEGGYTKQQIFNINKKYFYWKKM
PSRTFKAIEAKSVLGNKAFKDRLTLFLRANAAGDLS

>gi568815596f:189823336_190024213|GENSCAN_predicted_CDS_5|291_bp
atgtttgagactaacataggaagccatatccataacataaaagtacaaggtgaagcagct
agtgctgatgtagaagctacaagttatccagaagatctagctaagatcattgatgaaggt
ggctacactaaacaacagattttcaatatcaacaaaaaatacttctattggaagaagatg
ccatctaggacttttaaagctatagaagcgaagtcagtgcttggaaacaaggctttcaag
gataggctgactctctttttaagggctaatgcagctggtgatttaagttga

>gi568815596f:189823336_190024213|GENSCAN_predicted_peptide_6|418_aa
MIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLK
TSTRQGCPLSPLLFNIVLEVLARAIRQEKEIKDIQLGKEEVKLSLFADDMIVYLEKPIIS
APNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQITSELPFTIASKRIKYLGIQLT
RDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRISIMKMAILPKVIYRFNAIPIKLPM
TFFAELEKTTSKFIWNQKRARIAKTILSQKNRAGCIMLPDFKLYYKTTAIKTAWYWYQNR
DIDQWNRTEPSEIIPHIYNHLIFDKPDKNKKRGKDSLFNKWCWENWLAICRKLKLDPFFT
PYTKINSRWIKDLNVRHKTIKTLEENLGNTIQDIGMGKDFMSKHQKQWQQKPKLTNGI

>gi568815596f:189823336_190024213|GENSCAN_predicted_CDS_6|1257_bp
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacagccctttatgcta
aaaactctcaataaattaggtattgatgggatgtatctcaaaataataagagctatttat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actagcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaatcaggcaagagaaagaaataaaggatattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattgtatatttagaaaagcccatcatctca
gccccaaatctccttaagctgataagcaactttagcaaggtctcaggatacaaaatcaat
gtgcaaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcacg
agtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaca
agggatgtgaaggacctcttcaaggagaactacaaaccactgctcaacgaaataaaagag
gacacaaacaaatggaagaatattccatgctcatggataggaagaatcagtatcatgaaa
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttctttgcagaattggaaaaaactacttcaaagttcatatggaaccaaaaaagagcc
cgcattgccaagacaatcctaagccaaaagaacagagctggatgcatcatgctacctgac
ttcaaactatactacaagactacagcaatcaaaacagcatggtactggtaccaaaacaga
gatatagatcaatggaaccgaacagaaccctcagaaataataccacacatctacaaccat
ctgatctttgacaaacctgacaaaaacaagaaaaggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttctttaca
ccttatacaaaaattaattcaagatggattaaagacttaaatgttagacataaaaccata
aaaaccctagaagaaaacctaggcaatactattcaggacataggaatgggcaaggacttc
atgtcaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaa

>gi568815596f:189823336_190024213|GENSCAN_predicted_peptide_7|108_aa
MQLPFGWTEQHVETDTMDFCSKNYHRNIPGKLREFTDSLKEVHTTGNSVRQTKNCDFPKY
ERGKSYLQKHILTGELEKSRLWEDLSFPRAETDLAQNIKVKAAVGRGL

>gi568815596f:189823336_190024213|GENSCAN_predicted_CDS_7|327_bp
atgcagctcccatttggatggacagaacagcatgtggagactgacaccatggacttttgc
tccaagaactaccacaggaacataccaggaaaactgagagaattcacagattctttgaaa
gaagtgcacaccactggaaattctgtaagacagacaaaaaactgtgactttccaaagtat
gaaagggggaaatcttacctccaaaaacacatactcactggggaactggaaaaatccaga
ttatgggaggacttaagctttcctagagctgaaacagatttagcacaaaatataaaagta
aaagcagcagtgggaagaggcttgtag

>gi568815596f:189823336_190024213|GENSCAN_predicted_peptide_8|246_aa
MHSQRDGLKLELIHKREAECKSLKNLQPDHAVEKKNPFSGKEFKLAAEICMSNEEPSVNS
QDDGENVSRESQRLSQQPLLSQAQRPTGKQCFHGLSPGLCCCSVQPRDLAPCIPTMAKRG
QCTAEAVVSEGISPKPWWLTCGVGPMSAQKPRIEVWEPPYRFQRMYGNAWMSRQKFAAGV
ETSRRTSAKAVQKGNVGLEPPQRVLTGALPSGAVRRGPPSSRPQDDRSTDSLHVHVEKLQ
TLNASL

>gi568815596f:189823336_190024213|GENSCAN_predicted_CDS_8|741_bp
atgcattcacaaagagatggtttgaaactggaacttatacataaaagggaagcagagtgt
aaaagtttgaaaaatttgcagcctgaccatgcagtagaaaagaaaaacccattttccgga
aaagaattcaagctggctgcagaaatttgcatgagtaatgaggagccaagtgttaatagc
caagatgatggagaaaatgtctccagggaatctcagaggctttcacagcagcctctccta
tcacaggcccagaggcctacagggaaacaatgttttcatgggctgagcccagggctttgc
tgctgctctgtgcagcctcgggacttggcaccctgcatcccaaccatggctaaaaggggc
caatgtacagctgaggctgttgtttcagagggtataagccccaaaccttggtggcttaca
tgtggtgttgggcccatgagtgcacagaagccaagaattgaggtttgggaacctccatat
agatttcaaaggatgtatggaaatgcctggatgtccaggcagaagtttgctgcaggggtg
gaaacttcacggagaacctctgctaaggcagtgcagaagggaaatgtgggtttggagccc
ccacagagagtcctcactggggccctgcctagtggagctgtaagaagagggccaccatcc
tccagaccccaggatgacagatcaaccgacagcttgcatgtgcatgtggaaaagctacag
acactcaatgccagcctgtga

>gi568815596f:189823336_190024213|GENSCAN_predicted_peptide_9|133_aa
QSLVLDRNGQDLVSAPCPVIGSGFPRKAWAQLKSLDSEGTYSWRLSANCTPCNQMNANSG
TTWPENTPYDPSQSETIVVSSHQLCPIAESSRQPHLNSEQRQWPSHLENPKASSACPGFL
SAGPSRITGYMKQ

>gi568815596f:189823336_190024213|GENSCAN_predicted_CDS_9|402_bp
caaagtctggtattggacagaaatggccaggaccttgtgtctgcaccatgcccagtcatt
ggctctggcttcccaagaaaagcatgggctcagctcaaaagcttagattctgaaggcact
tacagctggaggctatcagctaactgcactccttgcaatcaaatgaatgcaaacagcggt
accacctggccagaaaatacaccctatgacccatcccaatcagagacaattgtggtgtcc
agccatcagctctgcccgattgcagaatccagccggcagccccacctaaactcagagcaa
agacagtggcccagccatctagagaacccaaaagcaagctctgcctgcccagggttctta
tcagctggcccatccagaatcacaggctacatgaaacagtga