Result of FASTA (omim) for pF1KB4506
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4506, 655 aa
  1>>>pF1KB4506 655 - 655 aa - 655 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.8445+/-0.000483; mu= -6.4702+/- 0.030
 mean_var=578.5855+/-120.239, 0's: 0 Z-trim(123.7): 322  B-trim: 33 in 1/55
 Lambda= 0.053320
 statistics sampled from 43720 (44083) to 43720 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.774), E-opt: 0.2 (0.517), width:  16
 Scan time: 10.770

The best scores are:                                      opt bits E(85289)
NP_001156757 (OMIM: 133450,612219) RNA-binding pro ( 655) 4722 378.3 4.8e-104
NP_005234 (OMIM: 133450,612219) RNA-binding protei ( 656) 4710 377.4  9e-104
XP_011528300 (OMIM: 133450,612219) PREDICTED: RNA- ( 656) 4710 377.4  9e-104
NP_053733 (OMIM: 133450,612219) RNA-binding protei ( 661) 4700 376.6 1.5e-103
XP_011528299 (OMIM: 133450,612219) PREDICTED: RNA- ( 657) 4698 376.5 1.7e-103
XP_016884136 (OMIM: 133450,612219) PREDICTED: RNA- ( 651) 4422 355.2 4.2e-97
XP_016884134 (OMIM: 133450,612219) PREDICTED: RNA- ( 652) 4410 354.3   8e-97
XP_016884135 (OMIM: 133450,612219) PREDICTED: RNA- ( 652) 4410 354.3   8e-97
XP_011528301 (OMIM: 133450,612219) PREDICTED: RNA- ( 653) 4398 353.4 1.5e-96
XP_016884150 (OMIM: 133450,612219) PREDICTED: RNA- ( 587) 4234 340.7 8.9e-93
XP_016884137 (OMIM: 133450,612219) PREDICTED: RNA- ( 638) 4062 327.5   9e-89
XP_011528302 (OMIM: 133450,612219) PREDICTED: RNA- ( 640) 4042 326.0 2.6e-88
XP_016884133 (OMIM: 133450,612219) PREDICTED: RNA- ( 668) 3937 317.9 7.2e-86
XP_011528298 (OMIM: 133450,612219) PREDICTED: RNA- ( 669) 3925 317.0 1.4e-85
XP_005261446 (OMIM: 133450,612219) PREDICTED: RNA- ( 669) 3920 316.6 1.8e-85
XP_011528297 (OMIM: 133450,612219) PREDICTED: RNA- ( 670) 3908 315.7 3.4e-85
XP_016884147 (OMIM: 133450,612219) PREDICTED: RNA- ( 600) 3597 291.7 5.1e-78
XP_016884148 (OMIM: 133450,612219) PREDICTED: RNA- ( 599) 3595 291.6 5.6e-78
NP_001156758 (OMIM: 133450,612219) RNA-binding pro ( 600) 3583 290.7 1.1e-77
XP_016884146 (OMIM: 133450,612219) PREDICTED: RNA- ( 601) 3432 279.0 3.4e-74
XP_016884138 (OMIM: 133450,612219) PREDICTED: RNA- ( 629) 3127 255.6   4e-67
XP_016884142 (OMIM: 133450,612219) PREDICTED: RNA- ( 614) 3119 255.0   6e-67
XP_016884141 (OMIM: 133450,612219) PREDICTED: RNA- ( 615) 3107 254.1 1.1e-66
XP_016884140 (OMIM: 133450,612219) PREDICTED: RNA- ( 615) 3107 254.1 1.1e-66
XP_016884145 (OMIM: 133450,612219) PREDICTED: RNA- ( 611) 3101 253.6 1.6e-66
XP_016884149 (OMIM: 133450,612219) PREDICTED: RNA- ( 597) 3099 253.4 1.7e-66
XP_016884139 (OMIM: 133450,612219) PREDICTED: RNA- ( 616) 3095 253.1 2.2e-66
XP_016884151 (OMIM: 133450,612219) PREDICTED: RNA- ( 582) 2935 240.8 1.1e-62
XP_016884143 (OMIM: 133450,612219) PREDICTED: RNA- ( 613) 2812 231.4 7.7e-60
XP_016884144 (OMIM: 133450,612219) PREDICTED: RNA- ( 612) 2810 231.2 8.6e-60
XP_011528303 (OMIM: 133450,612219) PREDICTED: RNA- ( 614) 2800 230.4 1.5e-59
XP_005261447 (OMIM: 133450,612219) PREDICTED: RNA- ( 613) 2798 230.3 1.6e-59
XP_016884155 (OMIM: 133450,612219) PREDICTED: RNA- ( 317) 2397 199.1 2.1e-50
XP_016884154 (OMIM: 133450,612219) PREDICTED: RNA- ( 317) 2397 199.1 2.1e-50
NP_001156759 (OMIM: 133450,612219) RNA-binding pro ( 354) 2226 186.0   2e-46
XP_016884152 (OMIM: 133450,612219) PREDICTED: RNA- ( 558) 1992 168.2 7.1e-41
XP_011528304 (OMIM: 133450,612219) PREDICTED: RNA- ( 597) 1771 151.3 9.7e-36
XP_016884153 (OMIM: 133450,612219) PREDICTED: RNA- ( 330) 1612 138.7 3.2e-32
NP_001164408 (OMIM: 137070,608030,614782) RNA-bind ( 522) 1072 97.4 1.4e-19
XP_011544083 (OMIM: 137070,608030,614782) PREDICTE ( 524) 1064 96.8 2.1e-19
NP_004951 (OMIM: 137070,608030,614782) RNA-binding ( 526) 1060 96.5 2.6e-19
NP_001164105 (OMIM: 137070,608030,614782) RNA-bind ( 525) 1059 96.4 2.7e-19
NP_003478 (OMIM: 601574,612237) TATA-binding prote ( 589)  998 91.8 7.6e-18
NP_631961 (OMIM: 601574,612237) TATA-binding prote ( 592)  989 91.1 1.2e-17
XP_011523617 (OMIM: 601574,612237) PREDICTED: TATA ( 501)  917 85.5 5.2e-16
XP_005255290 (OMIM: 137070,608030,614782) PREDICTE ( 321)  642 64.1 9.1e-10
XP_011544084 (OMIM: 137070,608030,614782) PREDICTE ( 321)  642 64.1 9.1e-10
XP_016880670 (OMIM: 601574,612237) PREDICTED: TATA ( 323)  521 54.8 5.8e-07
XP_016874320 (OMIM: 108300,120140,132450,150600,15 (1305)  434 48.8 0.00015
XP_016869755 (OMIM: 120215,130000) PREDICTED: coll (1715)  425 48.3 0.00028


>>NP_001156757 (OMIM: 133450,612219) RNA-binding protein  (655 aa)
 initn: 4722 init1: 4722 opt: 4722  Z-score: 1989.0  bits: 378.3 E(85289): 4.8e-104
Smith-Waterman score: 4722; 100.0% identity (100.0% similar) in 655 aa overlap (1-655:1-655)

               10        20        30        40        50        60
pF1KB4 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 GRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNS
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 AIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 TAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 GPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECN
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 QCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRG
              550       560       570       580       590       600

              610       620       630       640       650     
pF1KB4 GRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY
              610       620       630       640       650     

>>NP_005234 (OMIM: 133450,612219) RNA-binding protein EW  (656 aa)
 initn: 2626 init1: 2508 opt: 4710  Z-score: 1984.0  bits: 377.4 E(85289): 9e-104
Smith-Waterman score: 4710; 99.8% identity (99.8% similar) in 656 aa overlap (1-655:1-656)

               10        20        30        40        50        60
pF1KB4 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR
              250       260       270       280       290       300

              310       320        330       340       350         
pF1KB4 GRGRGGFDRGGMSRGGRGGGRGGMG-AGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDN
       ::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
NP_005 GRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDN
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB4 SAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDP
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB4 PTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGP
              430       440       450       460       470       480

     480       490       500       510       520       530         
pF1KB4 GGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTEC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTEC
              490       500       510       520       530       540

     540       550       560       570       580       590         
pF1KB4 NQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFR
              550       560       570       580       590       600

     600       610       620       630       640       650     
pF1KB4 GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY
              610       620       630       640       650      

>>XP_011528300 (OMIM: 133450,612219) PREDICTED: RNA-bind  (656 aa)
 initn: 4518 init1: 4518 opt: 4710  Z-score: 1984.0  bits: 377.4 E(85289): 9e-104
Smith-Waterman score: 4710; 99.8% identity (99.8% similar) in 656 aa overlap (1-655:1-656)

               10        20        30         40        50         
pF1KB4 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQ-AYGQQSYGTYGQPTDVSYTQAQTTA
       :::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::
XP_011 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQQAYGQQSYGTYGQPTDVSYTQAQTTA
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB4 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB4 TQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSY
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB4 PMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTS
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB4 YPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDN
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB4 RGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDN
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB4 SAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDP
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB4 PTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGP
              430       440       450       460       470       480

     480       490       500       510       520       530         
pF1KB4 GGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTEC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTEC
              490       500       510       520       530       540

     540       550       560       570       580       590         
pF1KB4 NQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFR
              550       560       570       580       590       600

     600       610       620       630       640       650     
pF1KB4 GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY
              610       620       630       640       650      

>>NP_053733 (OMIM: 133450,612219) RNA-binding protein EW  (661 aa)
 initn: 4239 init1: 4239 opt: 4700  Z-score: 1979.8  bits: 376.6 E(85289): 1.5e-103
Smith-Waterman score: 4700; 99.1% identity (99.1% similar) in 661 aa overlap (1-655:1-661)

               10        20        30        40        50        60
pF1KB4 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_053 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
               10        20        30        40        50        60

               70              80        90       100       110    
pF1KB4 YGQTAYATSYGQPPT------GYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAA
       :::::::::::::::      :::::::::::::::::::::::::::::::::::::::
NP_053 YGQTAYATSYGQPPTVEGTSTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAA
               70        80        90       100       110       120

          120       130       140       150       160       170    
pF1KB4 QSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_053 QSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQ
              130       140       150       160       170       180

          180       190       200       210       220       230    
pF1KB4 VPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_053 VPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQ
              190       200       210       220       230       240

          240       250       260       270       280       290    
pF1KB4 QPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_053 QPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSM
              250       260       270       280       290       300

          300       310       320       330       340       350    
pF1KB4 SGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_053 SGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPD
              310       320       330       340       350       360

          360       370       380       390       400       410    
pF1KB4 EDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_053 EDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATV
              370       380       390       400       410       420

          420       430       440       450       460       470    
pF1KB4 SYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_053 SYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPG
              430       440       450       460       470       480

          480       490       500       510       520       530    
pF1KB4 GPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_053 GPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFA
              490       500       510       520       530       540

          540       550       560       570       580       590    
pF1KB4 WRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_053 WRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGD
              550       560       570       580       590       600

          600       610       620       630       640       650    
pF1KB4 RGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_053 RGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRP
              610       620       630       640       650       660

        
pF1KB4 Y
       :
NP_053 Y
        

>>XP_011528299 (OMIM: 133450,612219) PREDICTED: RNA-bind  (657 aa)
 initn: 2709 init1: 2508 opt: 4698  Z-score: 1979.0  bits: 376.5 E(85289): 1.7e-103
Smith-Waterman score: 4698; 99.7% identity (99.7% similar) in 657 aa overlap (1-655:1-657)

               10        20        30         40        50         
pF1KB4 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQ-AYGQQSYGTYGQPTDVSYTQAQTTA
       :::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::
XP_011 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQQAYGQQSYGTYGQPTDVSYTQAQTTA
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB4 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB4 TQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSY
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB4 PMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTS
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB4 YPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDN
              250       260       270       280       290       300

     300       310       320        330       340       350        
pF1KB4 RGRGRGGFDRGGMSRGGRGGGRGGMG-AGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSD
       :::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
XP_011 RGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSD
              310       320       330       340       350       360

      360       370       380       390       400       410        
pF1KB4 NSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYED
              370       380       390       400       410       420

      420       430       440       450       460       470        
pF1KB4 PPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGG
              430       440       450       460       470       480

      480       490       500       510       520       530        
pF1KB4 PGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTE
              490       500       510       520       530       540

      540       550       560       570       580       590        
pF1KB4 CNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGF
              550       560       570       580       590       600

      600       610       620       630       640       650     
pF1KB4 RGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY
              610       620       630       640       650       

>>XP_016884136 (OMIM: 133450,612219) PREDICTED: RNA-bind  (651 aa)
 initn: 3993 init1: 3739 opt: 4422  Z-score: 1864.3  bits: 355.2 E(85289): 4.2e-97
Smith-Waterman score: 4502; 95.5% identity (95.5% similar) in 668 aa overlap (1-655:1-651)

               10        20        30        40        50        60
pF1KB4 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 GRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNS
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 AIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 TAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPG
              430       440       450       460       470       480

              490       500       510       520                    
pF1KB4 GPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNP-------------G
       ::::::::::::::::::::::::::::::::::::::::::::::             :
XP_016 GPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPSIGDFCCDVIVCRG
              490       500       510       520       530       540

       530       540       550       560       570       580       
pF1KB4 CGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMF
       :::::::::::::::                 ::::::::::::::::::::::::::::
XP_016 CGNQNFAWRTECNQC-----------------GDRGRGGPGGMRGGRGGLMDRGGPGGMF
              550                        560       570       580   

       590       600       610       620       630       640       
pF1KB4 RGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHR
           590       600       610       620       630       640   

       650     
pF1KB4 QERRDRPY
       ::::::::
XP_016 QERRDRPY
           650 

>>XP_016884134 (OMIM: 133450,612219) PREDICTED: RNA-bind  (652 aa)
 initn: 3895 init1: 2229 opt: 4410  Z-score: 1859.3  bits: 354.3 E(85289): 8e-97
Smith-Waterman score: 4490; 95.4% identity (95.4% similar) in 669 aa overlap (1-655:1-652)

               10        20        30        40        50        60
pF1KB4 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR
              250       260       270       280       290       300

              310       320        330       340       350         
pF1KB4 GRGRGGFDRGGMSRGGRGGGRGGMG-AGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDN
       ::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
XP_016 GRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDN
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB4 SAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDP
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB4 PTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGP
              430       440       450       460       470       480

     480       490       500       510       520                   
pF1KB4 GGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNP-------------
       :::::::::::::::::::::::::::::::::::::::::::::::             
XP_016 GGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPSIGDFCCDVIVCR
              490       500       510       520       530       540

        530       540       550       560       570       580      
pF1KB4 GCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGM
       ::::::::::::::::                 :::::::::::::::::::::::::::
XP_016 GCGNQNFAWRTECNQC-----------------GDRGRGGPGGMRGGRGGLMDRGGPGGM
              550                        560       570       580   

        590       600       610       620       630       640      
pF1KB4 FRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEH
           590       600       610       620       630       640   

        650     
pF1KB4 RQERRDRPY
       :::::::::
XP_016 RQERRDRPY
           650  

>>XP_016884135 (OMIM: 133450,612219) PREDICTED: RNA-bind  (652 aa)
 initn: 3891 init1: 3535 opt: 4410  Z-score: 1859.3  bits: 354.3 E(85289): 8e-97
Smith-Waterman score: 4490; 95.4% identity (95.4% similar) in 669 aa overlap (1-655:1-652)

               10        20        30         40        50         
pF1KB4 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQ-AYGQQSYGTYGQPTDVSYTQAQTTA
       :::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::
XP_016 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQQAYGQQSYGTYGQPTDVSYTQAQTTA
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB4 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB4 TQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSY
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB4 PMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTS
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB4 YPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDN
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB4 RGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDN
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB4 SAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDP
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB4 PTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGP
              430       440       450       460       470       480

     480       490       500       510       520                   
pF1KB4 GGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNP-------------
       :::::::::::::::::::::::::::::::::::::::::::::::             
XP_016 GGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPSIGDFCCDVIVCR
              490       500       510       520       530       540

        530       540       550       560       570       580      
pF1KB4 GCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGM
       ::::::::::::::::                 :::::::::::::::::::::::::::
XP_016 GCGNQNFAWRTECNQC-----------------GDRGRGGPGGMRGGRGGLMDRGGPGGM
              550                        560       570       580   

        590       600       610       620       630       640      
pF1KB4 FRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEH
           590       600       610       620       630       640   

        650     
pF1KB4 RQERRDRPY
       :::::::::
XP_016 RQERRDRPY
           650  

>>XP_011528301 (OMIM: 133450,612219) PREDICTED: RNA-bind  (653 aa)
 initn: 3691 init1: 2025 opt: 4398  Z-score: 1854.3  bits: 353.4 E(85289): 1.5e-96
Smith-Waterman score: 4478; 95.2% identity (95.2% similar) in 670 aa overlap (1-655:1-653)

               10        20        30         40        50         
pF1KB4 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQ-AYGQQSYGTYGQPTDVSYTQAQTTA
       :::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::
XP_011 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQQAYGQQSYGTYGQPTDVSYTQAQTTA
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB4 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB4 TQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSY
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB4 PMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTS
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB4 YPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDN
              250       260       270       280       290       300

     300       310       320        330       340       350        
pF1KB4 RGRGRGGFDRGGMSRGGRGGGRGGMG-AGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSD
       :::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
XP_011 RGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSD
              310       320       330       340       350       360

      360       370       380       390       400       410        
pF1KB4 NSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYED
              370       380       390       400       410       420

      420       430       440       450       460       470        
pF1KB4 PPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGG
              430       440       450       460       470       480

      480       490       500       510       520                  
pF1KB4 PGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNP------------
       ::::::::::::::::::::::::::::::::::::::::::::::::            
XP_011 PGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPSIGDFCCDVIVC
              490       500       510       520       530       540

         530       540       550       560       570       580     
pF1KB4 -GCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGG
        ::::::::::::::::                 ::::::::::::::::::::::::::
XP_011 RGCGNQNFAWRTECNQC-----------------GDRGRGGPGGMRGGRGGLMDRGGPGG
              550                        560       570       580   

         590       600       610       620       630       640     
pF1KB4 MFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGE
           590       600       610       620       630       640   

         650     
pF1KB4 HRQERRDRPY
       ::::::::::
XP_011 HRQERRDRPY
           650   

>>XP_016884150 (OMIM: 133450,612219) PREDICTED: RNA-bind  (587 aa)
 initn: 4234 init1: 4234 opt: 4234  Z-score: 1786.7  bits: 340.7 E(85289): 8.9e-93
Smith-Waterman score: 4234; 100.0% identity (100.0% similar) in 580 aa overlap (76-655:8-587)

          50        60        70        80        90       100     
pF1KB4 QPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATV
                                     ::::::::::::::::::::::::::::::
XP_016                        MQLSFVLGYTTPTAPQAYSQPVQGYGTGAYDTTTATV
                                      10        20        30       

         110       120       130       140       150       160     
pF1KB4 TTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGY
        40        50        60        70        80        90       

         170       180       190       200       210       220     
pF1KB4 GQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSS
       100       110       120       130       140       150       

         230       240       250       260       270       280     
pF1KB4 YGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGF
       160       170       180       190       200       210       

         290       300       310       320       330       340     
pF1KB4 SGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDL
       220       230       240       250       260       270       

         350       360       370       380       390       400     
pF1KB4 DLGPPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLGPPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKET
       280       290       300       310       320       330       

         410       420       430       440       450       460     
pF1KB4 GKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGM
       340       350       360       370       380       390       

         470       480       490       500       510       520     
pF1KB4 PPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPN
       400       410       420       430       440       450       

         530       540       550       560       570       580     
pF1KB4 PGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGG
       460       470       480       490       500       510       

         590       600       610       620       630       640     
pF1KB4 MFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGE
       520       530       540       550       560       570       

         650     
pF1KB4 HRQERRDRPY
       ::::::::::
XP_016 HRQERRDRPY
       580       




655 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 03:02:08 2016 done: Fri Nov  4 03:02:09 2016
 Total Scan time: 10.770 Total Display time:  0.200

Function used was FASTA [36.3.4 Apr, 2011]
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