GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:01:53

Sequence gi568815585r:36748679_36979689 : 231011 bp : 40.24% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1989   2042   54  2  0   72   72    55 0.767   3.63
 1.02 Intr +   6623   6746  124  1  1   79   96   169 0.852  16.04
 1.03 Intr +  29220  29341  122  1  2   59   79    69 0.099   2.39
 1.04 Term +  32829  32933  105  2  0   57   41   120 0.247   1.63
 1.05 PlyA +  34400  34405    6                               1.05

 2.00 Prom +  44836  44875   40                              -4.65
 2.01 Init +  45806  46055  250  1  1   95   10   223 0.978  12.87
 2.02 Term +  46104  46372  269  1  2   73   48   189 0.965   8.07
 2.03 PlyA +  48854  48859    6                               1.05

 3.00 Prom +  60195  60234   40                              -4.75
 3.01 Init +  70680  71279  600  2  0   93   54   535 0.080  43.93
 3.02 Intr +  79339  79482  144  0  0   60   64    72 0.251   1.56
 3.03 Intr +  87383  87497  115  1  1   70   29    85 0.052  -0.10
 3.04 Intr +  91917  92096  180  1  0   49   66   110 0.008   3.82
 3.05 Term +  95134  95291  158  2  2   32   48   129 0.020   0.41
 3.06 PlyA +  96577  96582    6                               1.05

 4.08 PlyA -  96924  96919    6                               1.05
 4.07 Term - 100141  99998  144  1  0  114   42   123 0.996   7.23
 4.06 Intr - 104997 104741  257  1  2   68  116   254 0.223  22.44
 4.05 Intr - 117080 116859  222  0  0   98   90   125 0.460  10.88
 4.04 Intr - 118705 118595  111  2  0   72   84    37 0.210   1.13
 4.03 Intr - 124068 123976   93  1  0   77   52    90 0.264   3.32
 4.02 Intr - 130967 130600  368  1  2   84   94   242 0.690  18.26
 4.01 Init - 131853 131837   17  0  2   57   69    38 0.712  -1.46
 4.00 Prom - 132495 132456   40                              -8.45

 5.00 Prom + 133277 133316   40                              -5.15
 5.01 Init + 139067 139252  186  1  0   74   97    95 0.523   8.10
 5.02 Term + 145989 146081   93  2  0  155   51    46 0.573   4.45
 5.03 PlyA + 147185 147190    6                               1.05

 6.00 Prom + 152099 152138   40                              -6.85
 6.01 Init + 159187 159237   51  0  0   33   93    86 0.770   4.81
 6.02 Intr + 168052 168252  201  0  0   26   63   179 0.614   7.76
 6.03 Intr + 168291 168586  296  2  2   29   96   124 0.412   2.18
 6.04 Intr + 170943 171049  107  0  2   84   36    49 0.265  -1.76
 6.05 Intr + 171172 171369  198  2  0   74   57   162 0.915  10.10
 6.06 Intr + 171459 171589  131  1  2   45    0   278 0.364  14.19
 6.07 Term + 171824 172057  234  1  0   91   49    82 0.460  -0.06
 6.08 PlyA + 172322 172327    6                               1.05

 7.02 PlyA - 172927 172922    6                               1.05
 7.01 Sngl - 178107 177907  201  0  0   65   39   215 0.262   9.23
 7.00 Prom - 185524 185485   40                              -6.85

 8.04 PlyA - 185809 185804    6                               1.05
 8.03 Term - 189968 189703  266  0  2  -34   53   345 0.128  13.49
 8.02 Intr - 190448 190123  326  1  2   66   30   273 0.160  13.79
 8.01 Init - 190806 190676  131  0  2   61   47   175 0.988  10.37
 8.00 Prom - 193215 193176   40                              -7.05

 9.02 PlyA - 193533 193528    6                               1.05
 9.01 Sngl - 195804 195571  234  0  0   52   44   274 0.641  14.25
 9.00 Prom - 198354 198315   40                              -6.55

10.00 Prom + 201314 201353   40                              -3.25
10.01 Init + 206665 206713   49  0  1   45  103    19 0.634   0.26
10.02 Intr + 208963 209183  221  2  2   63   22   208 0.851   8.80
10.03 Intr + 209340 209419   80  2  2   22   56   101 0.730  -2.27
10.04 Term + 209732 209888  157  2  1   86   46   194 0.818  11.42
10.05 PlyA + 210309 210314    6                               1.05

11.03 PlyA - 211393 211388    6                               1.05
11.02 Term - 217048 216893  156  1  0   89   39    66 0.068  -1.25
11.01 Intr - 223358 223299   60  2  0   89   94    43 0.180   3.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  70680  71336  657  2  0   93   42   542 0.887  44.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:36748679_36979689|GENSCAN_predicted_peptide_1|134_aa
MNHTQNLPILQISDLHDKTQTKPHVQTLGEASAKVKLDMQARDADLPLIEREREKERREG
DNNFYSEIGQGGQLEAAAVHNTHRGIKGVSEYSTFNQNNQVEAAKPPSLLHSECLQAQQD
VEAAKVYGLCPPEW

>gi568815585r:36748679_36979689|GENSCAN_predicted_CDS_1|405_bp
atgaatcatacccagaatctccccatcctgcagatcagtgacttacatgacaagactcaa
acgaagccccatgtccagaccctcggagaagcaagtgccaaggtgaaattggacatgcaa
gcccgtgatgcagatctgcccctgattgaaagagaaagagaaaaagaaagaagggaggga
gataataatttctattcagagataggccaaggtggccaattagaagcagctgcggtccac
aacactcacagaggaataaaaggggtgagtgaatacagcaccttcaaccaaaataatcag
gtggaggcagccaagccgccttcactcttgcactctgaatgtctgcaggctcaacaggat
gtagaagctgccaaggtttatggcttgtgccctccagagtggtag

>gi568815585r:36748679_36979689|GENSCAN_predicted_peptide_2|172_aa
MGALEEGFIVPFSSDSDAHFDAAVGYLEDIIMDEDFQLLQRNFINNYYQEFEDTKENKLT
YTPIFNEYISLAGKYIEEQYIEERKYIEEQLLEQILGFTMATFTTLQHHKDEVVGDILQM
LLKFTDFLAFKEMFLDCRAEKEGQRLDLSRGLVETSLCKSSSMTASQNNLQQ

>gi568815585r:36748679_36979689|GENSCAN_predicted_CDS_2|519_bp
atgggtgctttagaagaaggcttcattgtgcccttctcctctgactctgatgcacatttt
gatgctgcggttggatatttagaggacattatcatggatgaagatttccagttattacag
agaaatttcatcaacaactactaccaggagtttgaggacaccaaagagaataaactcacc
tacacacctatttttaatgaatatatttctttggcaggaaagtatatagaagaacagtat
atagaagaaagaaagtatatagaagaacagttgctggagcaaattcttggctttaccatg
gcaactttcacaacgttacagcaccacaaagatgaagtggttggtgacatactccaaatg
ctgctcaaatttacagattttctggcttttaaagaaatgtttctggactgcagagcagaa
aaagaaggccagagactggacttaagccgtggtttagtggagacttcattgtgcaaatca
tcttctatgacagcttctcagaacaatctgcagcagtag

>gi568815585r:36748679_36979689|GENSCAN_predicted_peptide_3|398_aa
MEAQGVAEGAGPGAASGVPHPAALAPAAAPTLAPASVAAAASQFTLLVMQPCAGQDEAAA
PGGSVGAGKPVRYLCEGAGDGEEEAGEDEADLLDTSDPPGGGESAASLEDLEDEETHSGG
EGSSGGARRRGSGGGSMSKTCTYEGCSETTSQVAKQRKPWMCKKHRNKMYKDKYKKKKSD
QALNCGGTASTGSAGNVKLESLLLKVMKQLLSVEVIKLIDINLDSSSSVVLIKGQFDCHS
DLENHWLLSFTLVAEKDVACLKMYSISTDADFYELFVAWALEVPRVGLVDVVLCGKRNFA
EVLKLRILRWRDQPELSGWALNVITRVLIRGTLAYRRTRDVMMEATGPDVDVTRWSQQLV
TADSTLLIIGLLVHLSPQNGKLLKSRNFVIVSTVPADA

>gi568815585r:36748679_36979689|GENSCAN_predicted_CDS_3|1197_bp
atggaggcgcagggtgtagcggagggcgcggggccgggcgccgccagcggcgtgccccac
cccgcggccctagccccggctgcggctcccaccttggcgccagcctcggtggcggccgcg
gcctctcaattcaccctgctagtgatgcaaccctgtgctgggcaggacgaggctgcggcc
cccgggggcagcgttggggcgggcaagcccgttaggtacctgtgcgaaggggccggggat
ggcgaagaggaggctggggaggacgaggcggacctgttagacacttcggaccctccgggg
ggaggcgagagcgcggctagtttggaggatctagaggacgaggagactcactcggggggc
gagggcagcagcgggggcgcccggaggcggggcagcggtgggggcagcatgagcaagacc
tgcacctacgaaggctgcagcgagaccacgagccaggtggccaagcagcgcaaaccgtgg
atgtgcaagaaacaccgcaacaagatgtacaaggacaagtataaaaagaagaagagcgac
caggccctgaactgcggtgggactgcctcgactggcagcgcgggaaacgtcaaactcgag
tcattgttactgaaggtaatgaagcagttactttctgtggaagtcataaagttaatagat
attaatcttgactcatctagctcagtggttctcatcaagggtcaatttgattgtcatagt
gaccttgaaaaccactggcttttaagctttaccctcgtagcagaaaaggatgtagcctgc
cttaagatgtattccataagcacagatgctgatttttatgagctatttgtagcttgggct
ttagaggttccaagagtaggacttgttgatgttgtcttatgtggcaaaaggaactttgca
gaggtgcttaagttgaggattctgagatggagagatcaacctgaattatctggatgggct
ctaaatgtaatcacacgtgtccttataagaggaacccttgcttacagaagaacaagagat
gtgatgatggaagcaacagggcctgatgtagatgtcactcggtggtcccagcagcttgtc
acagctgacagcacactgcttattattggtttacttgttcacctttctccacaaaatggt
aagctccttaaaagtagaaactttgtcattgtatctacagtgcctgctgatgcataa

>gi568815585r:36748679_36979689|GENSCAN_predicted_peptide_4|403_aa
MAVQECPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGAMDELERALSCPGQPSKCV
TIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPY
HYRRVETPATRSPSPRARPATLTPQEVLLSQRVPINTQVIDTPPLPYHATEASETQSGQP
VDATADRHVVLSIPNGDFRPVCYEEPQHWCSVAYYELNNRVGETFQASSRSVLIDGFTDP
SNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECVSDSSIFVQSRNCNY
QHGFHPATVCKIPSGCSLKVFNNQLFAQLLAQSVHHGFEVVYELTKMCTIRMSFVKGWGA
EYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS

>gi568815585r:36748679_36979689|GENSCAN_predicted_CDS_4|1212_bp
atggctgtccaggagtgccccgcagtgaagagactgctaggctggaagcaaggagatgaa
gaggaaaagtgggcagagaaggcagtggactctctagtgaagaagttaaagaagaagaag
ggagccatggacgagctggagagggctctcagctgcccggggcagcccagcaaatgcgtc
acgattccccgctccctggacgggcggctgcaggtgtcccaccgcaagggcctgccccat
gtgatttactgtcgcgtgtggcgctggccggatctgcagtcccaccacgagctgaagccg
ctggagtgctgtgagttcccatttggctccaagcagaaagaagtgtgcattaacccttac
cactaccgccgggtggagactccagccacgcgttctcccagtccccgtgcacggccagct
accctcactccccaggaagtccttctgagccagagagtccctatcaacactcaggtcatt
gacacaccacccctgccttatcatgccacagaagcctctgagacccagagtggccaacct
gtagatgccacagctgatagacatgtagtgctatcgataccaaatggagactttcgacca
gtttgttacgaggagccccagcactggtgctcggtcgcctactatgaactgaacaaccga
gttggggagacattccaggcttcctcccgaagtgtgctcatagatgggttcaccgaccct
tcaaataacaggaacagattctgtcttggacttctttctaatgtaaacagaaactcaacg
atagaaaataccaggagacatataggaaagggtgtgcacttgtactacgtcgggggagag
gtgtatgccgagtgcgtgagtgacagcagcatctttgtgcagagccggaactgcaactat
caacacggcttccacccagctaccgtctgcaagatccccagcggctgcagcctcaaggtc
ttcaacaaccagctcttcgctcagctcctggcccagtcagttcaccacggctttgaagtc
gtgtatgaactgaccaagatgtgtactatccggatgagttttgttaagggttggggtgct
gagtatcatcgccaggatgtcaccagcaccccctgctggattgagattcatcttcatggg
ccactgcagtggctggacaaagttctgactcagatgggctctccacataaccccatttct
tcagtgtcttaa

>gi568815585r:36748679_36979689|GENSCAN_predicted_peptide_5|92_aa
MHVAKDRSGTTEGKRSKREQIQAGLSIWSQDDEGVPSENSKVAEKLVRQAAGGVTDLRSK
EKVQSPPWSPPDPLPDALYLSYVTYPVWHHAD

>gi568815585r:36748679_36979689|GENSCAN_predicted_CDS_5|279_bp
atgcatgtggcaaaagatagaagtgggacaacagaagggaagaggagtaaacgggagcag
atacaggcaggtttgtctatctggtcacaggatgatgagggtgttccctctgaaaactcc
aaggttgcagagaagttagtgagacaggcagcaggaggggtgacagatttgaggagcaag
gaaaaggtccagtcacctccatggagtcctcctgatcccctgcccgatgctttgtactta
tcatatgtcacttatcctgtgtggcatcatgctgattga

>gi568815585r:36748679_36979689|GENSCAN_predicted_peptide_6|405_aa
MCHRYLEALEENRIPDKVRVEKAKSHRSSKEDIPGTRVITESPVKAAPEQGIQDEEVIFE
DPVGGGEAGKASAWGKGAQERKARHKIGKDREDKPGKVVLGQPNTKGSRHQRRAEYKSGK
CGRGVRHGFGVGSVRMKTTKQEEHPVFMGIMTPNANRYLEILTTLVDTSFLRDKIYRNIY
FKSYSKRPLRRLSWSLPTPRAPAPTRPPPPPRVEHPLTDRLHQKTREQRPPKAKPHAEEP
PRLPRGRTTSPSTQCAHTHAHKQRAAEEGTSYLSPPCHSSLPHPAPAGPGGGGGDRDSGC
SSGGGGGGGGGPSRRQSDWSREASSPVLPRAALSVPLRDPRLGPCPACRGGPGVGWEPFV
CVGRLASLSPTPPLRFLASTWSPKPEELSAQQEYRITGPSVWRPF

>gi568815585r:36748679_36979689|GENSCAN_predicted_CDS_6|1218_bp
atgtgccatcggtacctggaagccttggaagaaaacagaatccctgataaggtaagagtt
gaaaaggcgaagagccacaggagctcgaaggaggacatacctgggaccagggtcatcaca
gaaagtcccgtgaaggcagcgcctgaacagggcatacaagatgaagaagtcatatttgag
gatcctgtgggaggtggggaagctgggaaggcctcagcgtggggtaaaggtgcacaggag
aggaaagccaggcataaaatagggaaagaccgggaagataagcctggaaaagtggtcttg
ggtcagcctaacacaaaaggaagccgacaccaaaggagagcagaatacaagtcaggcaag
tgcggccgaggtgtccgtcatggttttggggtaggaagtgtcaggatgaagaccaccaag
caagaagaacatccagttttcatgggtataatgactcctaatgctaacagatatcttgaa
atcctaacaactttagttgacacaagtttcttaagagacaaaatttaccggaatatttat
tttaaaagctacagcaagcgacccctcaggcgcctatcctggtccctgcccacgccccgg
gccccagccccgacccgaccgccgcccccgccgcgggtcgaacatcccctgacagacagg
ctccaccaaaaaacccgggaacaacgaccgccaaaagccaagcctcacgccgaggagcct
cccaggctgccccgaggacgaacaacttcgccctccactcaatgcgctcacacgcacgca
cacaagcagcgcgcggccgaggagggcacgtcttacctgtccccgccgtgccactcatcc
ctcccccacccagcgcctgcagggcccggcggcggcggcggggaccgagacagcggctgc
agcagcggcggcggcggcggcggcggcggcggccccagccggcgtcagtcagactggagc
cgcgaagcctcatcgcccgtattaccccgcgctgccctctcggtccccctgcgcgacccc
aggctcggcccctgcccggcctgccggggtggcccgggggtggggtgggagccctttgtc
tgcgtgggtcgcctcgcgtctctctctcccaccccacctctgagatttcttgccagcacc
tggagcccgaaaccagaagagttgtcagcccaacaagaatataggatcaccggcccatca
gtctggagacccttctga

>gi568815585r:36748679_36979689|GENSCAN_predicted_peptide_7|66_aa
MCFAKKHNKKGPKKMQANSAKAMSARAKAIEALVKPKEVKPKIPKGVSCKLDRLAYIALP
QAWEVC

>gi568815585r:36748679_36979689|GENSCAN_predicted_CDS_7|201_bp
atgtgctttgccaagaagcacaacaagaagggcccaaagaagatgcaggccaacagtgcc
aaggccatgagtgcacgtgccaaggctatcgaggccctcgtaaagcccaaggaggttaag
cccaagatcccaaagggagtcagctgcaagcttgatcgacttgcctatattgccctaccc
caagcttgggaagtatgctag

>gi568815585r:36748679_36979689|GENSCAN_predicted_peptide_8|240_aa
MEPEGIIESNWNEIVDSFDDMSFSESLLCGTYAHGFGKPSDIQQCINMCAKVQKLQMEAP
HIIMGTPGRVSDMLNWRYLSPKYIKMFVLDEADEMLSHRFKDQICDIFQMLNSNTQVVLL
SATIPSDVLEVTKKFMRDPIRILVKKEELTLKDFTVSAMHGDMDQKERDVVMREYRSGSS
RVLITTDLLPRGIDVQQLSLVINYDPPTNRENYIHRIGRGGQFGHKGVAINMVAEDKRTL

>gi568815585r:36748679_36979689|GENSCAN_predicted_CDS_8|723_bp
atggagcctgagggcatcatcgagagtaactggaatgagattgttgacagctttgatgac
atgagcttctcggagtccctcctctgtggcacctatgcccatggttttgggaagccctct
gacatccagcagtgcatcaacatgtgtgctaaggtacagaaactgcagatggaagctccc
catatcatcatgggtacccctggccgtgtgtctgacatgcttaactggagatatctgtct
cctaaatacatcaagatgtttgtactggacgaagctgacgaaatgttaagccatagattc
aaggaccagatctgtgacatattccaaatgctcaatagcaacacccaggtagttttgctg
tcagctacaattccttctgatgtacttgaggtgaccaagaagttcatgagggaccccatt
cggattcttgtcaagaaggaagagttaaccctgaaggattttactgtctctgccatgcat
ggagatatggaccaaaaggaacgagatgtggtcatgagggagtatcgttctggctctagc
agagttttgattaccactgacctgctgcccagaggcattgatgtgcagcagctttcttta
gtcatcaactacgaccctcccacgaacagggaaaactatatccacagaatcggtcgaggt
ggacagtttggccataaaggtgtggctattaacatggtggcagaagacaagaggactctt
tga

>gi568815585r:36748679_36979689|GENSCAN_predicted_peptide_9|77_aa
MDVGEIQQVIETTPVELAEDDLMKMSASEPVPDDAEEDIQEAGLQLLKSACDFFYNLDPS
TIWALKLKQMVEEGLVL

>gi568815585r:36748679_36979689|GENSCAN_predicted_CDS_9|234_bp
atggatgttggagaaattcaacaggtaatagagacaacaccagtggagttagcagaagat
gacttgatgaagatgagtgcttctgaaccagtgccagatgatgcagaagaagacatacaa
gaagcaggactccaattattgaagtctgcttgtgacttcttttacaacttggacccttcc
acaatatgggcactgaaactaaagcaaatggtagaagaaggattggtactgtag

>gi568815585r:36748679_36979689|GENSCAN_predicted_peptide_10|168_aa
MSVKKKHKIRGNRNNAALLGIRNSPQKAGLSPYEMLYRQPLLTNDLVLDQETAKLVADIT
SLAKYQQVLKTLQEACPREEGKELFHPGDMETENPGDNASYSCEPLEDLCLLFKRQPIEA
VKLQVVLQMEPQMQCMTKIYHGPLDWPASPCSDVDGIEGTPPEEISTA

>gi568815585r:36748679_36979689|GENSCAN_predicted_CDS_10|507_bp
atgagtgttaaaaagaaacacaaaatcagaggcaacagaaacaatgcagccttactagga
atccgaaactctccccaaaaagcgggacttagcccatatgaaatgctgtatagacagcca
ctcctaaccaatgaccttgtgcttgaccaagagacggccaagttagttgcagacatcacc
tccttagccaaatatcaacaagttcttaaaacattacaggaagcctgtccccgagaagag
ggaaaggaactattccaccctggagacatggaaaccgaaaatccaggagacaacgctagc
tattcctgtgaacctctagaggatctgtgcctgctctttaagcgacaaccaattgaagct
gtaaaactacaagtggttcttcaaatggagccccagatgcagtgcatgactaagatctac
catggacccctggactggcctgctagcccatgctccgatgttgatggcatcgaaggcacc
cctccagaggaaatctcaactgcatga

>gi568815585r:36748679_36979689|GENSCAN_predicted_peptide_11|71_aa
NQMAIACGSRAHLEKESIAQRSYFRTLLMYGFHFLVWFLCVKGIRDTQCGFKLFTREAAS
RTFSSLHVERW

>gi568815585r:36748679_36979689|GENSCAN_predicted_CDS_11|216_bp
aatcaaatggctatagcatgtggatctcgagctcatttagaaaaagaatcaattgctcag
cgttcttacttccgtactcttctcatgtatgggttccactttctggtgtggttcctttgt
gtcaaaggaatcagggacacacagtgtgggttcaaattatttactcgagaagcagcttca
cggacgttttcatctctacacgttgaacgatggtag