GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:01:14

Sequence gi568815596r:216576754_216794775 : 218022 bp : 46.95% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    807    802    6                               1.05
 1.05 Term -   8092   7891  202  0  1   67   50    82 0.030  -0.84
 1.04 Intr -  12544  12459   86  1  2   86  110    54 0.155   6.02
 1.03 Intr -  14330  14221  110  0  2   95    1    90 0.111   1.00
 1.02 Intr -  17528  17375  154  2  1   10   69   139 0.419   3.85
 1.01 Init -  28954  28847  108  1  0   79   56    86 0.501   4.72
 1.00 Prom -  29585  29546   40                              -7.76

 2.02 PlyA -  30272  30267    6                               1.05
 2.01 Sngl -  34173  33589  585  0  0  113   40   839 0.564  77.79
 2.00 Prom -  53899  53860   40                              -5.36

 3.00 Prom +  55827  55866   40                              -3.36
 3.01 Init +  56771  57212  442  1  1   92   97   747 0.776  70.23
 3.02 Intr +  83804  84033  230  0  2  101   56   362 0.892  31.89
 3.03 Intr +  85105  85245  141  0  0   83   99   226 0.961  23.75
 3.04 Term +  87187  87351  165  0  0  128   41   221 0.965  19.32
 3.05 PlyA +  88076  88081    6                               1.05

 4.04 PlyA -  91377  91372    6                               1.05
 4.03 Term -  92921  92759  163  1  1   93   54   120 0.784   6.51
 4.02 Intr -  93075  93030   46  1  1   58   94    16 0.416  -3.33
 4.01 Init -  94196  94127   70  2  1   72   40   111 0.894   5.91
 4.00 Prom -  96169  96130   40                              -9.26

 5.05 PlyA -  98822  98817    6                               1.05
 5.04 Term - 100129  99998  132  1  0   99   44   302 0.997  24.99
 5.03 Intr - 101478 101359  120  0  0  105   98   138 0.999  17.19
 5.02 Intr - 102326 102097  230  0  2  124   57   358 0.996  33.89
 5.01 Init - 118022 117686  337  2  1   80   97   718 0.895  67.34
 5.00 Prom - 122015 121976   40                              -6.16

 6.00 Prom + 126715 126754   40                              -4.56
 6.01 Init + 128193 128282   90  2  0   59   59    77 0.443   2.39
 6.02 Intr + 132175 132295  121  0  1   81   56    52 0.266   1.37
 6.03 Intr + 134945 134997   53  0  2   94   53    31 0.378  -1.17
 6.04 Intr + 135627 135716   90  2  0  110  100    33 0.790   6.89
 6.05 Term + 152721 152831  111  2  0   86   49    52 0.052  -0.34
 6.06 PlyA + 158696 158701    6                               1.05

 7.00 Prom + 165354 165393   40                              -1.96
 7.01 Init + 174070 174252  183  0  0   44   94    90 0.216   4.32
 7.02 Term + 201313 201366   54  0  0   34   49   109 0.120  -0.84
 7.03 PlyA + 201837 201842    6                               1.05

 8.02 PlyA - 202080 202075    6                               1.05
 8.01 Sngl - 209377 209162  216  1  0   91   49   220 0.861  13.57

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:216576754_216794775|GENSCAN_predicted_peptide_1|219_aa
MAGFSPPSGGPPVIYQFLQSATATWKPEGKGTSEMQVKVRQKINSQGKYDEDKKRLVDLE
NEVAVMILPWHYQSDLDGNQVTKEGGMVRGHKKPVTPSPGTVPTSHTDRCFTPPLLGSTS
YSPWSFGQLAPEIFQWPIREQAGRAVTPAMEVSSALTAARVHSHLWSLHSGAHESASTQA
PLYSSMQLKLPAHEQQPEDVPPVSDQAINALSPLSGLTS

>gi568815596r:216576754_216794775|GENSCAN_predicted_CDS_1|660_bp
atggccggcttctcccctccttctggtggccctccagtgatttaccagttcctccaatca
gccacagctacctggaagccagagggcaaaggcacctcagaaatgcaggttaaagtgagg
caaaagataaacagtcaaggaaaatatgatgaggataagaaaaggctagtggatttggaa
aatgaggtggcagtgatgatcttgccatggcactaccagagtgacctggatggaaaccag
gtcacaaaggaaggaggaatggtacgtggccataagaaacccgtgacaccctcccctgga
actgtacccacgtcccacacggacagatgcttcactcctccacttcttggcagtacttcc
tacagcccctggagctttggccagctagccccagaaatcttccagtggcccatcagagag
caagctggcagagctgtcactcccgccatggaagtcagctcagccctgactgctgcccga
gtccactcccatctgtggagcctccactcaggagcccatgaatcagcttccacccaagct
ccactctacagctccatgcagctcaaactacctgctcatgaacaacaaccagaagatgtt
cctcccgtctcagatcaagccatcaatgccctttctcctctctctggtctcacttcttga

>gi568815596r:216576754_216794775|GENSCAN_predicted_peptide_2|194_aa
MAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDVQRVAQCLKFQL
NLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPFSCSLDLIGFPM
VTDDFVVNGSYAEQMYGMCESLWEPNMDPEHPFETISPAMLNAVDWGAGSGMGVIIHITK
KDKITTRTLKAQMD

>gi568815596r:216576754_216794775|GENSCAN_predicted_CDS_2|585_bp
atggccatgaaggggaagaaccgtgtggccatcgctgcagacaggcacttcgggatccag
gcccagatggtgaccacggacttccaggagatctttcccatgggtggttggttgtacatc
ggtctggccgggcttgccactgacgtccagagagttgcccagtgcctcaagttccagctg
aacctatatgagttgaaggaaggtcagcagatcaaaccttataccttcacgagcatggtg
gccaacttcttgtatgagaaacattttggcccctactacactgatccagtcattgctggt
ttggacctgaagacctttaagcccttcagttgctctctagacctcatcggcttccccatg
gtgactgatgactttgtggtcaatggcagctatgccgaacaaatgtacggaatgtgtgag
tccctctgggaacccaacatggatccagaacacccgtttgaaaccatctccccagccatg
ctgaatgctgtggactggggtgcagggtcaggcatgggagtcatcatccacatcaccaag
aaggacaaaatcaccaccaggacactgaaggcccaaatggactaa

>gi568815596r:216576754_216794775|GENSCAN_predicted_peptide_3|325_aa
MLPRVGCPALPLPPPPLLPLLLLLLGASGGGGGARAEVLFRCPPCTPERLAACGPPPVAP
PAAVAAVAGGARMPCAELVREPGCGCCSVCARLEGEACGVYTPRCGQGLRCYPHPGSELP
LQALVMGEGTCEKRRDAEYGASPEQVADNGDDHSEGGLVENHVDSTMNMLGGGGSAGRKP
LKSGMKELAVFREKVTEQHRQMGKGGKHHLGLEEPKKLRPPPARTPCQQELDQVLERIST
MRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSLNGQRGECWCVNPNTGKLIQGAPTI
RGDPECHLFYNEQQEARGVHTQRMQ

>gi568815596r:216576754_216794775|GENSCAN_predicted_CDS_3|978_bp
atgctgccgagagtgggctgccccgcgctgccgctgccgccgccgccgctgctgccgctg
ctgctgctgctactgggcgcgagtggcggcggcggcggggcgcgcgcggaggtgctgttc
cgctgcccgccctgcacacccgagcgcctggccgcctgcgggcccccgccggttgcgccg
cccgccgcggtggccgcagtggccggaggcgcccgcatgccatgcgcggagctcgtccgg
gagccgggctgcggctgctgctcggtgtgcgcccggctggagggcgaggcgtgcggcgtc
tacaccccgcgctgcggccaggggctgcgctgctatccccacccgggctccgagctgccc
ctgcaggcgctggtcatgggcgagggcacttgtgagaagcgccgggacgccgagtatggc
gccagcccggagcaggttgcagacaatggcgatgaccactcagaaggaggcctggtggag
aaccacgtggacagcaccatgaacatgttgggcgggggaggcagtgctggccggaagccc
ctcaagtcgggtatgaaggagctggccgtgttccgggagaaggtcactgagcagcaccgg
cagatgggcaagggtggcaagcatcaccttggcctggaggagcccaagaagctgcgacca
ccccctgccaggactccctgccaacaggaactggaccaggtcctggagcggatctccacc
atgcgccttccggatgagcggggccctctggagcacctctactccctgcacatccccaac
tgtgacaagcatggcctgtacaacctcaaacagtgcaagatgtctctgaacgggcagcgt
ggggagtgctggtgtgtgaaccccaacaccgggaagctgatccagggagcccccaccatc
cggggggaccccgagtgtcatctcttctacaatgagcagcaggaggctcgcggggtgcac
acccagcggatgcagtag

>gi568815596r:216576754_216794775|GENSCAN_predicted_peptide_4|92_aa
MALSGYRGPAVEVEEEEVEDALGANTLTFSLSEKTKASSPFLHAPHLLVGPPRINHPISL
CVGDRGNGEDGIERNRGLQTELMDLAQELTSG

>gi568815596r:216576754_216794775|GENSCAN_predicted_CDS_4|279_bp
atggctctctcaggctaccggggcccagcagtggaggtagaggaggaggaggtggaggat
gcattaggagcaaacacccttaccttctccctatcagagaaaaccaaggccagcagcccc
ttcctgcacgctccccacctgcttgtcggccccccacgcatcaaccatcccatctccctc
tgtgttggtgacagaggaaatggggaggacggaatagagaggaaccgcggcctgcagaca
gaactgatggaccttgctcaagaattgacatcaggatga

>gi568815596r:216576754_216794775|GENSCAN_predicted_peptide_5|272_aa
MVLLTAVLLLLAAYAGPAQSLGSFVHCEPCDEKALSMCPPSPLGCELVKEPGCGCCMTCA
LAEGQSCGVYTERCAQGLRCLPRQDEEKPLHALLHGRGVCLNEKSYREQVKIERDSREHE
EPTTSEMAEETYSPKIFRPKHTRISELKAEAVKKDRRKKLTQSKFVGGAENTAHPRIISA
PEMRQESEQGPCRRHMEASLQELKASPRMVPRAVYLPNCDRKGFYKRKQCKPSRGRKRGI
CWCVDKYGMKLPGMEYVDGDFQCHTFDSSNVE

>gi568815596r:216576754_216794775|GENSCAN_predicted_CDS_5|819_bp
atggtgttgctcaccgcggtcctcctgctgctggccgcctatgcggggccggcccagagc
ctgggctccttcgtgcactgcgagccctgcgacgagaaagccctctccatgtgccccccc
agccccctgggctgcgagctggtcaaggagccgggctgcggctgctgcatgacctgcgcc
ctggccgaggggcagtcgtgcggcgtctacaccgagcgctgcgcccaggggctgcgctgc
ctcccccggcaggacgaggagaagccgctgcacgccctgctgcacggccgcggggtttgc
ctcaacgaaaagagctaccgcgagcaagtcaagatcgagagagactcccgtgagcacgag
gagcccaccacctctgagatggccgaggagacctactcccccaagatcttccggcccaaa
cacacccgcatctccgagctgaaggctgaagcagtgaagaaggaccgcagaaagaagctg
acccagtccaagtttgtcgggggagccgagaacactgcccacccccggatcatctctgca
cctgagatgagacaggagtctgagcagggcccctgccgcagacacatggaggcttccctg
caggagctcaaagccagcccacgcatggtgccccgtgctgtgtacctgcccaattgtgac
cgcaaaggattctacaagagaaagcagtgcaaaccttcccgtggccgcaaacgtggcatc
tgctggtgcgtggacaagtacgggatgaagctgccaggcatggagtacgttgacggggac
tttcagtgccacaccttcgacagcagcaacgttgagtga

>gi568815596r:216576754_216794775|GENSCAN_predicted_peptide_6|154_aa
MKAGSLTAVFTIALPRAYKSNRHIVDAQIFTYTDGALPQALAIRRLVSLSHTLRQQQEEK
DAASLKPIGKCTSGIGTKNNNRKTHSFKGASLSALNASCSITVTAQGRTPDPIGIHPRSP
LDVKWETKEWEVKGKINWAGKFGKAMKRLSSFEN

>gi568815596r:216576754_216794775|GENSCAN_predicted_CDS_6|465_bp
atgaaagcaggcagtttgacggctgtgttcaccattgcattgcccagggcctacaagagc
aaccgacatatagtagatgctcaaatatttacttacacggatggggctctgccacaggca
ttggctataagaaggttggtctctcttagccatacgttgcgacagcaacaggaagagaaa
gatgcggcctcgttaaagcccattgggaaatgcacttctggtataggaacaaagaacaac
aacagaaaaacccactcctttaaaggagcgagcctcagtgctttgaacgcctcctgctcc
atcacagtgactgctcaaggcaggacacctgatcctatcggaatccacccacggtctcct
ttagatgtgaagtgggaaacaaaggaatgggaagtgaaaggaaagataaattgggcaggg
aaatttgggaaggccatgaaaaggctctcgagctttgaaaattag

>gi568815596r:216576754_216794775|GENSCAN_predicted_peptide_7|78_aa
MKLDPPLSPYTKVNSRLIKDLNLRPETIKLLEDNIGKTLLDIGLDKNFMTKNPKANAIKT
KLEDSKVGDDLMAVAGVI

>gi568815596r:216576754_216794775|GENSCAN_predicted_CDS_7|237_bp
atgaaactggatcctcctctctcaccttatacaaaagtcaactcaagattgattaaggac
ttaaacctaagacctgaaactataaaacttctagaagataacattggaaaaacccttcta
gacattggcttagacaagaatttcatgaccaagaacccaaaagcaaatgcaataaaaaca
aagctagaagactcgaaagttggtgacgacttgatggctgtggctggtgtcatctga

>gi568815596r:216576754_216794775|GENSCAN_predicted_peptide_8|71_aa
MGDKKKKGRSAINEVVTEEYIIDIHKCIHGGASRSVSLRHSERSRNLPRRRWQFQICTLM
PVLTKLSEPKE

>gi568815596r:216576754_216794775|GENSCAN_predicted_CDS_8|216_bp
atgggtgacaagaagaaaaagggccgttctgccatcaatgaggtggtgactgaagaatac
atcatcgacattcacaagtgcatccatggaggggcttcaagaagcgtgtctctcaggcac
tcagagagatccagaaatttgccacgaaggagatggcaattccagatatgcacactgatg
ccagtcttaacaaagctgtccgagccaaaggaataa